RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 DNAH10Q8IVF4 4471 aa11.06□□□□□ -0.64
HMGN1-208ENST00000443046 IGHV4OR15-8A0A075B7B6 117 aa11.06□□□□□ -0.64
HMGN1-208ENST00000443046 A0A087WW49 117 aa11.06□□□□□ -0.64
HMGN1-208ENST00000443046 HSPA12AO43301 675 aa11.06□□□□□ -0.64
HMGN1-208ENST00000443046 SULT1B1O43704 296 aa11.06□□□□□ -0.64
HMGN1-208ENST00000443046 IGLV1-51P01701 117 aa11.06□□□□□ -0.64
HMGN1-208ENST00000443046 LGALS1P09382 135 aaKnown RBP11.06□□□□□ -0.64
HMGN1-208ENST00000443046 CALB2P22676 271 aa11.06□□□□□ -0.64
HMGN1-208ENST00000443046 MYF6P23409 242 aa11.06□□□□□ -0.64
HMGN1-208ENST00000443046 LSAMPQ13449 338 aa11.06□□□□□ -0.64
HMGN1-208ENST00000443046 ZSCAN26Q16670 478 aa11.06□□□□□ -0.64
HMGN1-208ENST00000443046 HAGHQ16775 308 aa11.06□□□□□ -0.64
HMGN1-208ENST00000443046 CT45A1Q5HYN5 189 aa11.06□□□□□ -0.64
HMGN1-208ENST00000443046 NHLRC3Q5JS37 347 aa11.06□□□□□ -0.64
HMGN1-208ENST00000443046 ZNF529Q6P280 563 aa11.06□□□□□ -0.64
HMGN1-208ENST00000443046 OR5D14Q8NGL3 314 aa11.06□□□□□ -0.64
HMGN1-208ENST00000443046 CT45A3Q8NHU0 189 aa11.06□□□□□ -0.64
HMGN1-208ENST00000443046 EME1Q96AY2 570 aa11.06□□□□□ -0.64
HMGN1-208ENST00000443046 RITA1Q96K30 269 aa11.06□□□□□ -0.64
HMGN1-208ENST00000443046 MRPS28Q9Y2Q9 187 aaKnown RBP11.06□□□□□ -0.64
HMGN1-208ENST00000443046 IGHV3-43A0A0B4J1X8 118 aa11.05□□□□□ -0.64
HMGN1-208ENST00000443046 TMEM30CPA0ZSE6 113 aa11.05□□□□□ -0.64
HMGN1-208ENST00000443046 GABRPO00591 440 aa11.05□□□□□ -0.64
HMGN1-208ENST00000443046 SLC16A6O15403 523 aa11.05□□□□□ -0.64
HMGN1-208ENST00000443046 LANCL1O43813 399 aa11.05□□□□□ -0.64
HMGN1-208ENST00000443046 SOX15O60248 233 aa11.05□□□□□ -0.64
HMGN1-208ENST00000443046 HTR1AP08908 422 aa11.05□□□□□ -0.64
HMGN1-208ENST00000443046 IGHV3-43DP0DP04 118 aa11.05□□□□□ -0.64
HMGN1-208ENST00000443046 ATP6V1E1P36543 226 aa11.05□□□□□ -0.64
HMGN1-208ENST00000443046 CRIP2P52943 208 aaPredicted RBP11.05□□□□□ -0.64
HMGN1-208ENST00000443046 MMDQ15546 238 aa11.05□□□□□ -0.64
HMGN1-208ENST00000443046 SERPINA12Q8IW75 414 aa11.05□□□□□ -0.64
HMGN1-208ENST00000443046 OR8J1Q8NGP2 316 aa11.05□□□□□ -0.64
HMGN1-208ENST00000443046 UBALD1Q8TB05 177 aa11.05□□□□□ -0.64
HMGN1-208ENST00000443046 PELI1Q96FA3 418 aa11.05□□□□□ -0.64
HMGN1-208ENST00000443046 HECTD4Q9Y4D8 3996 aa11.04□□□□□ -0.64
HMGN1-208ENST00000443046 MT-ND4P03905 459 aa11.04□□□□□ -0.64
HMGN1-208ENST00000443046 CNTFRP26992 372 aa11.04□□□□□ -0.64
HMGN1-208ENST00000443046 BLVRBP30043 206 aaPredicted RBP11.04□□□□□ -0.64
HMGN1-208ENST00000443046 ACTBP60709 375 aa11.04□□□□□ -0.64
HMGN1-208ENST00000443046 PITPNAQ00169 270 aa11.04□□□□□ -0.64
HMGN1-208ENST00000443046 ALKBH1Q13686 389 aaKnown RBP11.04□□□□□ -0.64
HMGN1-208ENST00000443046 STEAP3Q658P3 488 aa11.04□□□□□ -0.64
HMGN1-208ENST00000443046 ZNF497Q6ZNH5 498 aa11.04□□□□□ -0.64
HMGN1-208ENST00000443046 SPATA24Q86W54 205 aa11.04□□□□□ -0.64
HMGN1-208ENST00000443046 SGPP2Q8IWX5 399 aa11.04□□□□□ -0.64
HMGN1-208ENST00000443046 OR10K1Q8NGX5 313 aa11.04□□□□□ -0.64
HMGN1-208ENST00000443046 OR4C12Q96R67 309 aa11.04□□□□□ -0.64
HMGN1-208ENST00000443046 THTPAQ9BU02 230 aa11.04□□□□□ -0.64
HMGN1-208ENST00000443046 ANKRD60Q9BZ19 345 aa11.04□□□□□ -0.64
HMGN1-208ENST00000443046 PARP11Q9NR21 331 aa11.04□□□□□ -0.64
HMGN1-208ENST00000443046 ST3GAL6Q9Y274 331 aa11.04□□□□□ -0.64
HMGN1-208ENST00000443046 FBXO7Q9Y3I1 522 aa11.04□□□□□ -0.64
HMGN1-208ENST00000443046 POLR2IP36954 125 aaKnown RBP11.03□□□□□ -0.64
HMGN1-208ENST00000443046 NDPQ00604 133 aa11.03□□□□□ -0.64
HMGN1-208ENST00000443046 RSU1Q15404 277 aa11.03□□□□□ -0.64
HMGN1-208ENST00000443046 C5orf64Q2M2E5 130 aa11.03□□□□□ -0.64
HMGN1-208ENST00000443046 HAPLN4Q86UW8 402 aa11.03□□□□□ -0.64
HMGN1-208ENST00000443046 NPBQ8NG41 125 aa11.03□□□□□ -0.64
HMGN1-208ENST00000443046 IL17DQ8TAD2 202 aa11.03□□□□□ -0.64
HMGN1-208ENST00000443046 CCDC107Q8WV48 283 aa11.03□□□□□ -0.64
HMGN1-208ENST00000443046 TNFAIP8L1Q8WVP5 186 aa11.03□□□□□ -0.64
HMGN1-208ENST00000443046 RFKQ969G6 155 aa11.03□□□□□ -0.64
HMGN1-208ENST00000443046 THAP7Q9BT49 309 aaPredicted RBP11.03□□□□□ -0.64
HMGN1-208ENST00000443046 GABARAPL1Q9H0R8 117 aa11.03□□□□□ -0.64
HMGN1-208ENST00000443046 IL36GQ9NZH8 169 aa11.03□□□□□ -0.64
HMGN1-208ENST00000443046 C12orf77C9JDV5 145 aa11.02□□□□□ -0.65
HMGN1-208ENST00000443046 G3V2T6 193 aa11.02□□□□□ -0.65
HMGN1-208ENST00000443046 GEMIN2O14893 280 aaKnown RBP11.02□□□□□ -0.65
HMGN1-208ENST00000443046 ARPC1BO15143 372 aaKnown RBP11.02□□□□□ -0.65
HMGN1-208ENST00000443046 NBR2O15453 112 aa11.02□□□□□ -0.65
HMGN1-208ENST00000443046 OR7C1O76099 320 aaPredicted RBP11.02□□□□□ -0.65
HMGN1-208ENST00000443046 NDUFA3O95167 84 aa11.02□□□□□ -0.65
HMGN1-208ENST00000443046 HSPB1P04792 205 aaKnown RBP11.02□□□□□ -0.65
HMGN1-208ENST00000443046 IFNA6P05013 189 aa11.02□□□□□ -0.65
HMGN1-208ENST00000443046 EGR2P11161 476 aaPredicted RBP11.02□□□□□ -0.65
HMGN1-208ENST00000443046 RBM11P57052 281 aaKnown RBP11.02□□□□□ -0.65
HMGN1-208ENST00000443046 FLOT2Q14254 428 aa11.02□□□□□ -0.65
HMGN1-208ENST00000443046 TMEM30BQ3MIR4 351 aa11.02□□□□□ -0.65
HMGN1-208ENST00000443046 LPCAT4Q643R3 524 aa11.02□□□□□ -0.65
HMGN1-208ENST00000443046 LIN54Q6MZP7 749 aa11.02□□□□□ -0.65
HMGN1-208ENST00000443046 LINC00596Q86U02 117 aa11.02□□□□□ -0.65
HMGN1-208ENST00000443046 FLYWCH2Q96CP2 140 aaKnown RBP11.02□□□□□ -0.65
HMGN1-208ENST00000443046 CPNE2Q96FN4 548 aaPredicted RBP11.02□□□□□ -0.65
HMGN1-208ENST00000443046 RIBC2Q9H4K1 309 aa11.02□□□□□ -0.65
HMGN1-208ENST00000443046 ENOPH1Q9UHY7 261 aa11.02□□□□□ -0.65
HMGN1-208ENST00000443046 STUB1Q9UNE7 303 aa11.02□□□□□ -0.65
HMGN1-208ENST00000443046 NUBP2Q9Y5Y2 271 aa11.02□□□□□ -0.65
HMGN1-208ENST00000443046 DAPL1A0PJW8 107 aa11.01□□□□□ -0.65
HMGN1-208ENST00000443046 HTR3BO95264 441 aa11.01□□□□□ -0.65
HMGN1-208ENST00000443046 RPSAP08865 295 aaKnown RBP11.01□□□□□ -0.65
HMGN1-208ENST00000443046 LINC00322Q6ZN03 302 aaPredicted RBP11.01□□□□□ -0.65
HMGN1-208ENST00000443046 ODF3L1Q8IXM7 274 aa11.01□□□□□ -0.65
HMGN1-208ENST00000443046 GAPTQ8N292 157 aa11.01□□□□□ -0.65
HMGN1-208ENST00000443046 TCTEX1D1Q8N7M0 179 aa11.01□□□□□ -0.65
HMGN1-208ENST00000443046 OR51A2Q8NGJ7 313 aa11.01□□□□□ -0.65
HMGN1-208ENST00000443046 OR52N1Q8NH53 320 aa11.01□□□□□ -0.65
HMGN1-208ENST00000443046 CASTOR1Q8WTX7 329 aa11.01□□□□□ -0.65
HMGN1-208ENST00000443046 C4orf36Q96KX1 117 aa11.01□□□□□ -0.65
HMGN1-208ENST00000443046 RHOVQ96L33 236 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms