RNA–Protein interactions for RNA: ENST00000442265.2

IRF3-204, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-204ENST00000442265 AWAT2Q6E213 333 aa13.12□□□□□ -0.31
IRF3-204ENST00000442265 RAB12Q6IQ22 244 aa13.12□□□□□ -0.31
IRF3-204ENST00000442265 Q6ZPA2 131 aa13.12□□□□□ -0.31
IRF3-204ENST00000442265 SLC25A48Q6ZT89 311 aaKnown RBP13.12□□□□□ -0.31
IRF3-204ENST00000442265 ZNF554Q86TJ5 538 aa13.12□□□□□ -0.31
IRF3-204ENST00000442265 ZNF439Q8NDP4 499 aa13.12□□□□□ -0.31
IRF3-204ENST00000442265 BPIFB6Q8NFQ5 453 aa13.12□□□□□ -0.31
IRF3-204ENST00000442265 NEK7Q8TDX7 302 aa13.12□□□□□ -0.31
IRF3-204ENST00000442265 CCDC107Q8WV48 283 aa13.12□□□□□ -0.31
IRF3-204ENST00000442265 PHF21AQ96BD5 680 aa13.12□□□□□ -0.31
IRF3-204ENST00000442265 NECAP2Q9NVZ3 263 aa13.12□□□□□ -0.31
IRF3-204ENST00000442265 ERGIC3Q9Y282 383 aa13.12□□□□□ -0.31
IRF3-204ENST00000442265 COL7A1Q02388 2944 aa13.12□□□□□ -0.31
IRF3-204ENST00000442265 PNMA8CA0A1B0GUJ8 204 aa13.11□□□□□ -0.31
IRF3-204ENST00000442265 A0A1W2PRX2 142 aa13.11□□□□□ -0.31
IRF3-204ENST00000442265 PSMB11A5LHX3 300 aa13.11□□□□□ -0.31
IRF3-204ENST00000442265 SPINT2O43291 252 aa13.11□□□□□ -0.31
IRF3-204ENST00000442265 PF4V1P10720 104 aa13.11□□□□□ -0.31
IRF3-204ENST00000442265 CD37P11049 281 aa13.11□□□□□ -0.31
IRF3-204ENST00000442265 MGMTP16455 207 aa13.11□□□□□ -0.31
IRF3-204ENST00000442265 FUT3P21217 361 aa13.11□□□□□ -0.31
IRF3-204ENST00000442265 CD1BP29016 333 aa13.11□□□□□ -0.31
IRF3-204ENST00000442265 GP2P55259 537 aaKnown RBP13.11□□□□□ -0.31
IRF3-204ENST00000442265 C6orf183Q5T699 404 aa13.11□□□□□ -0.31
IRF3-204ENST00000442265 SYT6Q5T7P8 510 aaPredicted RBP13.11□□□□□ -0.31
IRF3-204ENST00000442265 SIGIRRQ6IA17 410 aa13.11□□□□□ -0.31
IRF3-204ENST00000442265 TRAT1Q6PIZ9 186 aa13.11□□□□□ -0.31
IRF3-204ENST00000442265 MS4A15Q8N5U1 240 aa13.11□□□□□ -0.31
IRF3-204ENST00000442265 CHPT1Q8WUD6 406 aa13.11□□□□□ -0.31
IRF3-204ENST00000442265 RTN4IP1Q8WWV3 396 aaPredicted RBP13.11□□□□□ -0.31
IRF3-204ENST00000442265 EAF1Q96JC9 268 aaPredicted RBP13.11□□□□□ -0.31
IRF3-204ENST00000442265 MBNL3Q9NUK0 354 aaKnown RBP13.11□□□□□ -0.31
IRF3-204ENST00000442265 ETAA1Q9NY74 926 aa13.11□□□□□ -0.31
IRF3-204ENST00000442265 PEX16Q9Y5Y5 336 aa13.11□□□□□ -0.31
IRF3-204ENST00000442265 CDK1P06493 297 aa13.1□□□□□ -0.31
IRF3-204ENST00000442265 CD33P20138 364 aa13.1□□□□□ -0.31
IRF3-204ENST00000442265 IL3RAP26951 378 aa13.1□□□□□ -0.31
IRF3-204ENST00000442265 SLC6A1P30531 599 aa13.1□□□□□ -0.31
IRF3-204ENST00000442265 HNF4GQ14541 408 aa13.1□□□□□ -0.31
IRF3-204ENST00000442265 C9orf152Q5JTZ5 239 aa13.1□□□□□ -0.31
IRF3-204ENST00000442265 MOB3BQ86TA1 216 aa13.1□□□□□ -0.31
IRF3-204ENST00000442265 TGIF2LXQ8IUE1 241 aa13.1□□□□□ -0.31
IRF3-204ENST00000442265 PHYHIPQ92561 330 aa13.1□□□□□ -0.31
IRF3-204ENST00000442265 SELENOIQ9C0D9 397 aa13.1□□□□□ -0.31
IRF3-204ENST00000442265 VCXQ9H320 206 aa13.1□□□□□ -0.31
IRF3-204ENST00000442265 BANF2Q9H503 90 aa13.1□□□□□ -0.31
IRF3-204ENST00000442265 DCLRE1BQ9H816 532 aa13.1□□□□□ -0.31
IRF3-204ENST00000442265 PLSCR3Q9NRY6 295 aa13.1□□□□□ -0.31
IRF3-204ENST00000442265 TRAPPC2LQ9UL33 140 aa13.1□□□□□ -0.31
IRF3-204ENST00000442265 LSM2Q9Y333 95 aaKnown RBP13.1□□□□□ -0.31
IRF3-204ENST00000442265 TXNL1O43396 289 aa13.09□□□□□ -0.31
IRF3-204ENST00000442265 HBZP02008 142 aa13.09□□□□□ -0.31
IRF3-204ENST00000442265 UBBP0CG47 229 aa13.09□□□□□ -0.31
IRF3-204ENST00000442265 RCC1P18754 421 aaPredicted RBP13.09□□□□□ -0.31
IRF3-204ENST00000442265 VHLP40337 213 aa13.09□□□□□ -0.31
IRF3-204ENST00000442265 ZNF134P52741 427 aa13.09□□□□□ -0.31
IRF3-204ENST00000442265 GPR50Q13585 617 aa13.09□□□□□ -0.31
IRF3-204ENST00000442265 CT45A1Q5HYN5 189 aa13.09□□□□□ -0.31
IRF3-204ENST00000442265 C1orf100Q5SVJ3 147 aa13.09□□□□□ -0.31
IRF3-204ENST00000442265 C6orf141Q5SZD1 244 aa13.09□□□□□ -0.31
IRF3-204ENST00000442265 FAM53AQ6NSI3 398 aaPredicted RBP13.09□□□□□ -0.31
IRF3-204ENST00000442265 COMMD1Q8N668 190 aa13.09□□□□□ -0.31
IRF3-204ENST00000442265 OR2T10Q8NGZ9 312 aa13.09□□□□□ -0.31
IRF3-204ENST00000442265 CT45A3Q8NHU0 189 aa13.09□□□□□ -0.31
IRF3-204ENST00000442265 UBALD1Q8TB05 177 aa13.09□□□□□ -0.31
IRF3-204ENST00000442265 RCC1LQ96I51 464 aaKnown RBP13.09□□□□□ -0.31
IRF3-204ENST00000442265 MND1Q9BWT6 205 aa13.09□□□□□ -0.31
IRF3-204ENST00000442265 CST11Q9H112 138 aa13.09□□□□□ -0.31
IRF3-204ENST00000442265 ABCG5Q9H222 651 aa13.09□□□□□ -0.31
IRF3-204ENST00000442265 IGHV3-43A0A0B4J1X8 118 aa13.08□□□□□ -0.32
IRF3-204ENST00000442265 H0YHG0 523 aa13.08□□□□□ -0.32
IRF3-204ENST00000442265 PDCD6O75340 191 aa13.08□□□□□ -0.32
IRF3-204ENST00000442265 CRTAPO75718 401 aaPredicted RBP13.08□□□□□ -0.32
IRF3-204ENST00000442265 DUS4LO95620 317 aaKnown RBP13.08□□□□□ -0.32
IRF3-204ENST00000442265 PRB2P02812 416 aaPredicted RBP13.08□□□□□ -0.32
IRF3-204ENST00000442265 IGHV3-43DP0DP04 118 aa13.08□□□□□ -0.32
IRF3-204ENST00000442265 IGLL1P15814 213 aa13.08□□□□□ -0.32
IRF3-204ENST00000442265 REG1BP48304 166 aa13.08□□□□□ -0.32
IRF3-204ENST00000442265 SLC35A2P78381 396 aa13.08□□□□□ -0.32
IRF3-204ENST00000442265 SPHARQ15513 63 aa13.08□□□□□ -0.32
IRF3-204ENST00000442265 ACSM3Q53FZ2 586 aa13.08□□□□□ -0.32
IRF3-204ENST00000442265 LY6G6FQ5SQ64 297 aa13.08□□□□□ -0.32
IRF3-204ENST00000442265 FOXB2Q5VYV0 432 aa13.08□□□□□ -0.32
IRF3-204ENST00000442265 SLC35E3Q7Z769 313 aa13.08□□□□□ -0.32
IRF3-204ENST00000442265 LRRTM1Q86UE6 522 aa13.08□□□□□ -0.32
IRF3-204ENST00000442265 Q8N9W7 124 aa13.08□□□□□ -0.32
IRF3-204ENST00000442265 OR8H1Q8NGG4 311 aa13.08□□□□□ -0.32
IRF3-204ENST00000442265 OR4K15Q8NH41 348 aa13.08□□□□□ -0.32
IRF3-204ENST00000442265 SGCDQ92629 289 aa13.08□□□□□ -0.32
IRF3-204ENST00000442265 NOL4LQ96MY1 436 aaPredicted RBP13.08□□□□□ -0.32
IRF3-204ENST00000442265 ZFP57Q9NU63 452 aa13.08□□□□□ -0.32
IRF3-204ENST00000442265 LIN7CQ9NUP9 197 aaKnown RBP13.08□□□□□ -0.32
IRF3-204ENST00000442265 AURKAIP1Q9NWT8 199 aaPredicted RBP13.08□□□□□ -0.32
IRF3-204ENST00000442265 GNG12Q9UBI6 72 aa13.08□□□□□ -0.32
IRF3-204ENST00000442265 SERPINE3A8MV23 424 aa13.07□□□□□ -0.32
IRF3-204ENST00000442265 SLC31A2O15432 143 aa13.07□□□□□ -0.32
IRF3-204ENST00000442265 MOSP00540 346 aa13.07□□□□□ -0.32
IRF3-204ENST00000442265 PF4P02776 101 aa13.07□□□□□ -0.32
IRF3-204ENST00000442265 RPL23AP62750 156 aaKnown RBP13.07□□□□□ -0.32
IRF3-204ENST00000442265 HTD2P86397 168 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms