RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 OR5T2Q8NGG2 359 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 WNT5BQ9H1J7 359 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 CHMP1AQ9HD42 196 aaPredicted RBP6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 PCDHB16Q9NRJ7 776 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 RNF7Q9UBF6 113 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 F12P00748 615 aaPredicted RBP6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 LCN2P80188 198 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 LRP11Q86VZ4 500 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 ZDHHC23Q8IYP9 409 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 OR51E1Q8TCB6 317 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 LRRC29Q8WV35 223 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 FAM46BQ96A09 425 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 JKAMPQ9P055 326 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 RCC2Q9P258 522 aaKnown RBP6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 PRELID3BQ9Y3B1 194 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 ANKRD17O75179 2603 aaKnown RBP6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 COLCA2A8K830 154 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 B4DSR2 109 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 NDUFS8O00217 210 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 NUPL2O15504 423 aaKnown RBP6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 PMP2P02689 132 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 CHRM2P08172 466 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 HKR1P10072 659 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 CBX5P45973 191 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 TESK1Q15569 626 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 UBE2V2Q15819 145 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 PRAMEF6Q5VXH4 476 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 ANGPTL5Q86XS5 388 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 OR51F2Q8NH61 342 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 PHB2Q99623 299 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 SEC11CQ9BY50 192 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 CXXC4Q9H2H0 198 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 GPR84Q9NQS5 396 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 MMP26Q9NRE1 261 aa6.24□□□□□ -1.41
CDC42BPA-208ENST00000442054 ADAP1O75689 374 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 SCGNO76038 276 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 TUBG1P23258 451 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 NTF4P34130 210 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 NPBWR1P48145 328 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 MTCP1P56278 107 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 IL13RA1P78552 427 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 TFF3Q07654 80 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 RNASE10Q5GAN6 216 aaKnown RBP6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 ZNF600Q6ZNG1 722 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 ARHGAP5-AS1Q96IT6 56 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 TUBG2Q9NRH3 451 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 GPR173Q9NS66 373 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 PRR13Q9NZ81 148 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 ZNF581Q9P0T4 197 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 LPAR3Q9UBY5 353 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 POLDIP2Q9Y2S7 368 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 SESN1Q9Y6P5 492 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 UNC79Q9P2D8 2635 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 NUDT19A8MXV4 375 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 ZNF732B4DXR9 585 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 ZNF93P35789 620 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 ARHGDIBP52566 201 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 FLI1Q01543 452 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 ODF3L1Q8IXM7 274 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 FGFBP3Q8TAT2 258 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 PLEKHF2Q9H8W4 249 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 HIF1ANQ9NWT6 349 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 ZZEF1O43149 2961 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 IGKV1-27A0A075B6S5 117 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 IGHV3OR16-10A0A075B7F0 116 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 A0A0U1RQV5 110 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 NRASP01111 189 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 IGHV4-39P01824 125 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 LPAR6P43657 344 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 BAP18Q8IXM2 172 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 TMEM106BQ9NUM4 274 aa6.23□□□□□ -1.41
CDC42BPA-208ENST00000442054 FLNCQ14315 2725 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 ZNF816-ZNF321PA0A0X1KG74 233 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 PQLC2LA1A4F0 135 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 SHISA9B4DS77 424 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 IGKV3-15P01624 115 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 APOC3P02656 99 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 MAS1LP35410 378 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 HAAOP46952 286 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 RSU1Q15404 277 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 SURF2Q15527 256 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 CR1LQ2VPA4 569 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 NRN1LQ496H8 165 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 SCGB2B2Q4G0G5 96 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 GLIPR1L1Q6UWM5 242 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 IL34Q6ZMJ4 242 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 OR8G5Q8NG78 346 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 OR5D14Q8NGL3 314 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 OR13C9Q8NGT0 318 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 OR4K15Q8NH41 348 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 SPACA5Q96QH8 159 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 PECRQ9BY49 303 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 RGCCQ9H4X1 137 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 IL19Q9UHD0 177 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 KALRNO60229 2985 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 ASPMQ8IZT6 3477 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 IGHV4-30-2A0A087WSY4 118 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 KANTRA0A1W2PQU2 76 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 CDIPTO14735 213 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms