RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 TMEM241Q24JQ0 296 aa17.39■□□□□ 0.37
SHOX2-203ENST00000441443 BSXQ3C1V8 233 aa17.39■□□□□ 0.37
SHOX2-203ENST00000441443 WDR5BQ86VZ2 330 aa17.39■□□□□ 0.37
SHOX2-203ENST00000441443 PYGO2Q9BRQ0 406 aa17.39■□□□□ 0.37
SHOX2-203ENST00000441443 PLA2G3Q9NZ20 509 aa17.39■□□□□ 0.37
SHOX2-203ENST00000441443 LRRC3CA6NJW4 275 aa17.38■□□□□ 0.37
SHOX2-203ENST00000441443 IAPPP10997 89 aa17.38■□□□□ 0.37
SHOX2-203ENST00000441443 CCL7P80098 99 aa17.38■□□□□ 0.37
SHOX2-203ENST00000441443 ARL16Q0P5N6 197 aa17.38■□□□□ 0.37
SHOX2-203ENST00000441443 SLC25A53Q5H9E4 307 aa17.38■□□□□ 0.37
SHOX2-203ENST00000441443 TMEM211Q6ICI0 200 aa17.38■□□□□ 0.37
SHOX2-203ENST00000441443 Q6ZSR3 168 aa17.38■□□□□ 0.37
SHOX2-203ENST00000441443 OR5B12Q96R08 314 aa17.38■□□□□ 0.37
SHOX2-203ENST00000441443 IL17BQ9UHF5 180 aa17.38■□□□□ 0.37
SHOX2-203ENST00000441443 ZNF737O75373 536 aa17.38■□□□□ 0.37
SHOX2-203ENST00000441443 TESK1Q15569 626 aa17.38■□□□□ 0.37
SHOX2-203ENST00000441443 PRAMEF20Q5VT98 475 aa17.38■□□□□ 0.37
SHOX2-203ENST00000441443 ANKRD37Q7Z713 158 aa17.38■□□□□ 0.37
SHOX2-203ENST00000441443 ABHD14BQ96IU4 210 aa17.38■□□□□ 0.37
SHOX2-203ENST00000441443 MAP1LC3B2A6NCE7 125 aa17.37■□□□□ 0.37
SHOX2-203ENST00000441443 SLC22A20A6NK97 555 aa17.37■□□□□ 0.37
SHOX2-203ENST00000441443 A6NNC1 897 aa17.37■□□□□ 0.37
SHOX2-203ENST00000441443 DHHO43323 396 aa17.37■□□□□ 0.37
SHOX2-203ENST00000441443 MBP02144 154 aa17.37■□□□□ 0.37
SHOX2-203ENST00000441443 UCP1P25874 307 aa17.37■□□□□ 0.37
SHOX2-203ENST00000441443 TDGF1P3P51864 188 aa17.37■□□□□ 0.37
SHOX2-203ENST00000441443 RELQ04864 619 aaPredicted RBP17.37■□□□□ 0.37
SHOX2-203ENST00000441443 IQCJQ1A5X6 159 aa17.37■□□□□ 0.37
SHOX2-203ENST00000441443 ZNF774Q6NX45 483 aa17.37■□□□□ 0.37
SHOX2-203ENST00000441443 MRGPRGQ86SM5 289 aa17.37■□□□□ 0.37
SHOX2-203ENST00000441443 MBD3L1Q8WWY6 194 aa17.37■□□□□ 0.37
SHOX2-203ENST00000441443 UCN2Q96RP3 112 aa17.37■□□□□ 0.37
SHOX2-203ENST00000441443 P2RX4Q99571 388 aa17.37■□□□□ 0.37
SHOX2-203ENST00000441443 MAP1LC3BQ9GZQ8 125 aa17.37■□□□□ 0.37
SHOX2-203ENST00000441443 A0A1W2PQM1 296 aa17.37■□□□□ 0.37
SHOX2-203ENST00000441443 CLEC18AA5D8T8 446 aa17.37■□□□□ 0.37
SHOX2-203ENST00000441443 GALR2O43603 387 aaPredicted RBP17.37■□□□□ 0.37
SHOX2-203ENST00000441443 CFIP05156 583 aa17.37■□□□□ 0.37
SHOX2-203ENST00000441443 RPL29P47914 159 aaKnown RBP17.37■□□□□ 0.37
SHOX2-203ENST00000441443 RBM11P57052 281 aaKnown RBP17.37■□□□□ 0.37
SHOX2-203ENST00000441443 RPL23P62829 140 aaKnown RBP17.37■□□□□ 0.37
SHOX2-203ENST00000441443 BTNL3Q6UXE8 466 aa17.37■□□□□ 0.37
SHOX2-203ENST00000441443 LHFPL2Q6ZUX7 228 aa17.37■□□□□ 0.37
SHOX2-203ENST00000441443 CALHM1Q8IU99 346 aa17.37■□□□□ 0.37
SHOX2-203ENST00000441443 CLEC18CQ8NCF0 446 aa17.37■□□□□ 0.37
SHOX2-203ENST00000441443 TMEM170AQ8WVE7 144 aa17.37■□□□□ 0.37
SHOX2-203ENST00000441443 EXPH5Q8NEV8 1989 aa17.37■□□□□ 0.37
SHOX2-203ENST00000441443 MDH2P40926 338 aaKnown RBP17.37■□□□□ 0.37
SHOX2-203ENST00000441443 ERVFC1-1P60608 527 aa17.37■□□□□ 0.37
SHOX2-203ENST00000441443 HERPUD1Q15011 391 aa17.37■□□□□ 0.37
SHOX2-203ENST00000441443 DAZAP2Q15038 168 aaPredicted RBP17.37■□□□□ 0.37
SHOX2-203ENST00000441443 RHBDD2Q6NTF9 364 aa17.37■□□□□ 0.37
SHOX2-203ENST00000441443 NFAM1Q8NET5 270 aaPredicted RBP17.37■□□□□ 0.37
SHOX2-203ENST00000441443 OR5T1Q8NG75 326 aa17.37■□□□□ 0.37
SHOX2-203ENST00000441443 PIGCQ92535 297 aa17.37■□□□□ 0.37
SHOX2-203ENST00000441443 PLSCR2Q9NRY7 297 aa17.37■□□□□ 0.37
SHOX2-203ENST00000441443 A0A1B0GUS0 222 aa17.36■□□□□ 0.37
SHOX2-203ENST00000441443 ASCL4Q6XD76 172 aa17.36■□□□□ 0.37
SHOX2-203ENST00000441443 OR2M3Q8NG83 312 aa17.36■□□□□ 0.37
SHOX2-203ENST00000441443 OR51H1Q8NH63 302 aa17.36■□□□□ 0.37
SHOX2-203ENST00000441443 EXTL1Q92935 676 aa17.36■□□□□ 0.37
SHOX2-203ENST00000441443 GPR146Q96CH1 333 aa17.36■□□□□ 0.37
SHOX2-203ENST00000441443 ACY3Q96HD9 319 aa17.36■□□□□ 0.37
SHOX2-203ENST00000441443 A0A1W2PR80 420 aa17.36■□□□□ 0.37
SHOX2-203ENST00000441443 B4E171 279 aa17.36■□□□□ 0.37
SHOX2-203ENST00000441443 TSPAN7P41732 249 aa17.36■□□□□ 0.37
SHOX2-203ENST00000441443 PDLIM4P50479 330 aa17.36■□□□□ 0.37
SHOX2-203ENST00000441443 WDR74Q6RFH5 385 aaPredicted RBP17.36■□□□□ 0.37
SHOX2-203ENST00000441443 CYP2G1PQ6ZSU1 146 aa17.36■□□□□ 0.37
SHOX2-203ENST00000441443 RARRES3Q9UL19 164 aa17.36■□□□□ 0.37
SHOX2-203ENST00000441443 SIT1Q9Y3P8 196 aa17.36■□□□□ 0.37
SHOX2-203ENST00000441443 MSX1P28360 303 aa17.35■□□□□ 0.37
SHOX2-203ENST00000441443 HOXA6P31267 233 aa17.35■□□□□ 0.37
SHOX2-203ENST00000441443 HIST1H3AP68431 136 aa17.35■□□□□ 0.37
SHOX2-203ENST00000441443 LHX4Q969G2 390 aa17.35■□□□□ 0.37
SHOX2-203ENST00000441443 WNT5AP41221 380 aa17.35■□□□□ 0.37
SHOX2-203ENST00000441443 OR8B8Q15620 311 aa17.35■□□□□ 0.37
SHOX2-203ENST00000441443 C10orf128Q5T292 105 aa17.35■□□□□ 0.37
SHOX2-203ENST00000441443 PLCXD3Q63HM9 321 aa17.35■□□□□ 0.37
SHOX2-203ENST00000441443 Q6ZRM9 215 aa17.35■□□□□ 0.37
SHOX2-203ENST00000441443 ULBP2Q9BZM5 246 aa17.35■□□□□ 0.37
SHOX2-203ENST00000441443 PCED1AQ9H1Q7 454 aa17.35■□□□□ 0.37
SHOX2-203ENST00000441443 FKBP11Q9NYL4 201 aa17.35■□□□□ 0.37
SHOX2-203ENST00000441443 POLR3KQ9Y2Y1 108 aaPredicted RBP17.35■□□□□ 0.37
SHOX2-203ENST00000441443 FAM3BP58499 235 aaPredicted RBP17.34■□□□□ 0.37
SHOX2-203ENST00000441443 TGIF2LYQ8IUE0 185 aa17.34■□□□□ 0.37
SHOX2-203ENST00000441443 MYOTQ9UBF9 498 aa17.34■□□□□ 0.37
SHOX2-203ENST00000441443 NPIPA2E9PIF3 369 aa17.34■□□□□ 0.37
SHOX2-203ENST00000441443 NPIPA3F8WFD2 350 aa17.34■□□□□ 0.37
SHOX2-203ENST00000441443 LYSMD4Q5XG99 296 aa17.34■□□□□ 0.37
SHOX2-203ENST00000441443 MARCH11A6NNE9 402 aa17.34■□□□□ 0.37
SHOX2-203ENST00000441443 K7ESF4 209 aa17.34■□□□□ 0.37
SHOX2-203ENST00000441443 NPSP0C0P6 89 aa17.34■□□□□ 0.37
SHOX2-203ENST00000441443 MEF2BQ02080 365 aaPredicted RBP17.34■□□□□ 0.37
SHOX2-203ENST00000441443 ZNF705AQ6ZN79 300 aaPredicted RBP17.34■□□□□ 0.37
SHOX2-203ENST00000441443 GATAD1Q8WUU5 269 aa17.34■□□□□ 0.37
SHOX2-203ENST00000441443 TMEM208Q9BTX3 173 aa17.34■□□□□ 0.37
SHOX2-203ENST00000441443 ZNF407Q9C0G0 2248 aa17.33■□□□□ 0.37
SHOX2-203ENST00000441443 KBTBD11O94819 623 aa17.33■□□□□ 0.37
SHOX2-203ENST00000441443 IFNA1P01562 189 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms