RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 SLC25A48Q6ZT89 311 aaKnown RBP8.92□□□□□ -0.98
SYNE2-206ENST00000441438 THAP8Q8NA92 274 aa8.92□□□□□ -0.98
SYNE2-206ENST00000441438 C11orf45Q8TAV5 145 aa8.92□□□□□ -0.98
SYNE2-206ENST00000441438 DDIT4LQ96D03 193 aa8.92□□□□□ -0.98
SYNE2-206ENST00000441438 SLC17A9Q9BYT1 436 aa8.92□□□□□ -0.98
SYNE2-206ENST00000441438 Q9H8V8 135 aa8.92□□□□□ -0.98
SYNE2-206ENST00000441438 OR5B21A6NL26 309 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 M0R2Z0 102 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 TNFRSF11BO00300 401 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 OR2T1O43869 369 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 MAP2K3P46734 347 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 EMP1P54849 157 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 DIO3P55073 304 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 LOXL3P58215 753 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 SLC22A15Q8IZD6 547 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 SIGLEC12Q96PQ1 595 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 Q9UF83 564 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 NEUROG3Q9Y4Z2 214 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 SPEGQ15772 3267 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 TRAV24A0A0B4J272 114 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 A0A1B0GW64 132 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 CLDN1O95832 211 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 GLUD1P00367 558 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 GCGP01275 180 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 TACSTD2P09758 323 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 HOXD3P31249 432 aaPredicted RBP8.91□□□□□ -0.98
SYNE2-206ENST00000441438 ACVRL1P37023 503 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 FOXA1P55317 472 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 RGNQ15493 299 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 GLIPR1L1Q6UWM5 242 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 ZNF705AQ6ZN79 300 aaPredicted RBP8.91□□□□□ -0.98
SYNE2-206ENST00000441438 DUSP18Q8NEJ0 188 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.91□□□□□ -0.98
SYNE2-206ENST00000441438 RASL10AQ92737 203 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 HEBP1Q9NRV9 189 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 SLAMF8Q9P0V8 285 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 ZNF319Q9P2F9 582 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 FZR1Q9UM11 496 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 KIAA1549LQ6ZVL6 1849 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 PTPRDP23468 1912 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 MIA3Q5JRA6 1907 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 A0A1B0GX51 115 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 RHODO00212 210 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 MAS1P04201 325 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 FAM157BP0CG42 384 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 VSIG10L2P0DP72 767 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 CD1DP15813 335 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 IGFBP3P17936 291 aaPredicted RBP8.91□□□□□ -0.98
SYNE2-206ENST00000441438 ZNF672Q499Z4 452 aaPredicted RBP8.91□□□□□ -0.98
SYNE2-206ENST00000441438 KHDC3LQ587J8 217 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 ZNF542PQ5EBM4 170 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 TMEM207Q6UWW9 146 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 ZNF433Q8N7K0 673 aaPredicted RBP8.91□□□□□ -0.98
SYNE2-206ENST00000441438 ZNF548Q8NEK5 533 aaPredicted RBP8.91□□□□□ -0.98
SYNE2-206ENST00000441438 ZNF431Q8TF32 576 aaPredicted RBP8.91□□□□□ -0.98
SYNE2-206ENST00000441438 THEM6Q8WUY1 208 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 UBE2E3Q969T4 207 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 PITX2Q99697 317 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 CXXC4Q9H2H0 198 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 GPR84Q9NQS5 396 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 MBNL3Q9NUK0 354 aaKnown RBP8.91□□□□□ -0.98
SYNE2-206ENST00000441438 DLL3Q9NYJ7 618 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 MYO15AQ9UKN7 3530 aa8.91□□□□□ -0.98
SYNE2-206ENST00000441438 HELZP42694 1942 aaKnown RBP8.9□□□□□ -0.98
SYNE2-206ENST00000441438 BORCS7-ASMTA0A0B4J1R7 106 aa8.9□□□□□ -0.98
SYNE2-206ENST00000441438 A0A1B0GTL3 188 aa8.9□□□□□ -0.98
SYNE2-206ENST00000441438 ZNF682O95780 498 aa8.9□□□□□ -0.98
SYNE2-206ENST00000441438 CD8AP01732 235 aa8.9□□□□□ -0.98
SYNE2-206ENST00000441438 LINC00271P0C7V0 271 aa8.9□□□□□ -0.98
SYNE2-206ENST00000441438 SSR4P51571 173 aa8.9□□□□□ -0.98
SYNE2-206ENST00000441438 PDX1P52945 283 aa8.9□□□□□ -0.98
SYNE2-206ENST00000441438 HSD52Q0P140 79 aa8.9□□□□□ -0.98
SYNE2-206ENST00000441438 FZD2Q14332 565 aa8.9□□□□□ -0.98
SYNE2-206ENST00000441438 PRR31Q5SQ13 230 aa8.9□□□□□ -0.98
SYNE2-206ENST00000441438 ALKAL2Q6UX46 152 aa8.9□□□□□ -0.98
SYNE2-206ENST00000441438 Q6ZSR6 202 aa8.9□□□□□ -0.98
SYNE2-206ENST00000441438 OR8G5Q8NG78 346 aa8.9□□□□□ -0.98
SYNE2-206ENST00000441438 SLC37A2Q8TED4 501 aa8.9□□□□□ -0.98
SYNE2-206ENST00000441438 PRRG4Q9BZD6 226 aa8.9□□□□□ -0.98
SYNE2-206ENST00000441438 C3orf14Q9HBI5 128 aa8.9□□□□□ -0.98
SYNE2-206ENST00000441438 LOXL2Q9Y4K0 774 aa8.9□□□□□ -0.98
SYNE2-206ENST00000441438 PRUNE2Q8WUY3 3088 aa8.9□□□□□ -0.98
SYNE2-206ENST00000441438 PLXNA4Q9HCM2 1894 aa8.9□□□□□ -0.98
SYNE2-206ENST00000441438 MLNRO43193 412 aa8.9□□□□□ -0.99
SYNE2-206ENST00000441438 LINC00032P0C843 101 aa8.9□□□□□ -0.99
SYNE2-206ENST00000441438 GABRG2P18507 467 aa8.9□□□□□ -0.99
SYNE2-206ENST00000441438 FAM27E3Q08E93 113 aa8.9□□□□□ -0.99
SYNE2-206ENST00000441438 ACOT6Q3I5F7 207 aaPredicted RBP8.9□□□□□ -0.99
SYNE2-206ENST00000441438 SYTL3Q4VX76 610 aa8.9□□□□□ -0.99
SYNE2-206ENST00000441438 IL34Q6ZMJ4 242 aa8.9□□□□□ -0.99
SYNE2-206ENST00000441438 ZNF788Q6ZQV5 615 aa8.9□□□□□ -0.99
SYNE2-206ENST00000441438 GKN2Q86XP6 184 aa8.9□□□□□ -0.99
SYNE2-206ENST00000441438 BEST3Q8N1M1 668 aa8.9□□□□□ -0.99
SYNE2-206ENST00000441438 TMEM178AQ8NBL3 297 aa8.9□□□□□ -0.99
SYNE2-206ENST00000441438 RDH5Q92781 318 aa8.9□□□□□ -0.99
SYNE2-206ENST00000441438 MS4A4EQ96PG1 132 aa8.9□□□□□ -0.99
SYNE2-206ENST00000441438 SMCO4Q9NRQ5 59 aa8.9□□□□□ -0.99
SYNE2-206ENST00000441438 A0A0D9SEW6 157 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 GNGT2O14610 69 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 OR1E2P47887 323 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms