RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 COLQQ9Y215 455 aaPredicted RBP11.53□□□□□ -0.56
HERPUD1-204ENST00000439977 OR2W1Q9Y3N9 320 aa11.53□□□□□ -0.56
HERPUD1-204ENST00000439977 RNF115Q9Y4L5 304 aa11.53□□□□□ -0.56
HERPUD1-204ENST00000439977 DEGS1O15121 323 aa11.52□□□□□ -0.57
HERPUD1-204ENST00000439977 APLNRP35414 380 aa11.52□□□□□ -0.57
HERPUD1-204ENST00000439977 FGF8P55075 233 aaPredicted RBP11.52□□□□□ -0.57
HERPUD1-204ENST00000439977 CLN3Q13286 438 aa11.52□□□□□ -0.57
HERPUD1-204ENST00000439977 MPV17LQ2QL34 196 aa11.52□□□□□ -0.57
HERPUD1-204ENST00000439977 DCAF10Q5QP82 559 aa11.52□□□□□ -0.57
HERPUD1-204ENST00000439977 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.52□□□□□ -0.57
HERPUD1-204ENST00000439977 GNG13Q9P2W3 67 aa11.52□□□□□ -0.57
HERPUD1-204ENST00000439977 CACNG5Q9UF02 275 aa11.52□□□□□ -0.57
HERPUD1-204ENST00000439977 ZFP92A6NM28 416 aa11.52□□□□□ -0.57
HERPUD1-204ENST00000439977 TFF1P04155 84 aa11.52□□□□□ -0.57
HERPUD1-204ENST00000439977 CEBPDP49716 269 aaPredicted RBP11.52□□□□□ -0.57
HERPUD1-204ENST00000439977 UBE2KP61086 200 aa11.52□□□□□ -0.57
HERPUD1-204ENST00000439977 ALKBH6Q3KRA9 238 aa11.52□□□□□ -0.57
HERPUD1-204ENST00000439977 OR2B11Q5JQS5 317 aa11.52□□□□□ -0.57
HERPUD1-204ENST00000439977 ZNF324BQ6AW86 544 aaPredicted RBP11.52□□□□□ -0.57
HERPUD1-204ENST00000439977 LCN15Q6UWW0 184 aa11.52□□□□□ -0.57
HERPUD1-204ENST00000439977 TAAR9Q96RI9 348 aa11.52□□□□□ -0.57
HERPUD1-204ENST00000439977 LINC00470Q9BZP3 86 aa11.52□□□□□ -0.57
HERPUD1-204ENST00000439977 IFT22Q9H7X7 185 aa11.52□□□□□ -0.57
HERPUD1-204ENST00000439977 PRSS44E7EML9 344 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 IL18BPO95998 194 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 IGKV1-39P01597 117 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 IGKV1D-39P04432 117 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 RPL23AP62750 156 aaKnown RBP11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 RNF212Q495C1 297 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 MDP1Q86V88 176 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 CXorf67Q86X51 503 aaPredicted RBP11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 ZNF295-AS1Q8N0V1 137 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 LFNGQ8NES3 379 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 OR5D13Q8NGL4 314 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 RNF150Q9ULK6 438 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 MRPS18CQ9Y3D5 142 aaKnown RBP11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 FAM90A10PA6NDY2 464 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 FAM90A18PA6NE21 464 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 FAM90A16PA6NEW6 464 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 FAM90A20PA6NIJ5 464 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 FAM90A8PA6NJQ4 464 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 FAM90A7PA6NKC0 464 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 FAM90A22PA8MWA6 464 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 FAM90A12PA8MX19 464 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 FAM90A5PA8MXJ8 464 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 FAM90A23PA8MXZ1 464 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 H0Y980 276 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 CDIPTO14735 213 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 YIF1AO95070 293 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 S100A9P06702 114 aaKnown RBP11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 SRP19P09132 144 aaKnown RBP11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 OR8U8P0C7N1 319 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 FAM90A15PP0C7V4 464 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 FAM90A13PP0C7W8 464 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 FAM90A14PP0C7W9 464 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 FAM90A24PP0C7X0 464 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 ACP1P24666 158 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 PMELP40967 661 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 RPS16P62249 146 aaKnown RBP11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 GNG3P63215 75 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 DLK1P80370 383 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 ARL16Q0P5N6 197 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 ICAM4Q14773 271 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 RHEBQ15382 184 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 ZNF429Q86V71 674 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 MED12LQ86YW9 2145 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 TRAPPC2LQ9UL33 140 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 WSB1Q9Y6I7 421 aa11.51□□□□□ -0.57
HERPUD1-204ENST00000439977 RD3LP0DJH9 198 aa11.5□□□□□ -0.57
HERPUD1-204ENST00000439977 PAX6P26367 422 aa11.5□□□□□ -0.57
HERPUD1-204ENST00000439977 STX12Q86Y82 276 aa11.5□□□□□ -0.57
HERPUD1-204ENST00000439977 ZNF573Q86YE8 665 aa11.5□□□□□ -0.57
HERPUD1-204ENST00000439977 ATP5SQ99766 215 aa11.5□□□□□ -0.57
HERPUD1-204ENST00000439977 STRADBQ9C0K7 418 aa11.5□□□□□ -0.57
HERPUD1-204ENST00000439977 OR14J1Q9UGF5 321 aa11.5□□□□□ -0.57
HERPUD1-204ENST00000439977 UBE2CO00762 179 aa11.5□□□□□ -0.57
HERPUD1-204ENST00000439977 GRPP07492 148 aa11.5□□□□□ -0.57
HERPUD1-204ENST00000439977 ARR3P36575 388 aa11.5□□□□□ -0.57
HERPUD1-204ENST00000439977 MEOX1P50221 254 aa11.5□□□□□ -0.57
HERPUD1-204ENST00000439977 NRN1LQ496H8 165 aa11.5□□□□□ -0.57
HERPUD1-204ENST00000439977 PEAR1Q5VY43 1037 aaPredicted RBP11.5□□□□□ -0.57
HERPUD1-204ENST00000439977 Q6ZS49 121 aa11.5□□□□□ -0.57
HERPUD1-204ENST00000439977 TMPRSS7Q7RTY8 843 aa11.5□□□□□ -0.57
HERPUD1-204ENST00000439977 SAXO1Q8IYX7 474 aa11.5□□□□□ -0.57
HERPUD1-204ENST00000439977 GCNT2Q8N0V5 402 aa11.5□□□□□ -0.57
HERPUD1-204ENST00000439977 TUBA4BQ9H853 241 aa11.5□□□□□ -0.57
HERPUD1-204ENST00000439977 GTF3C1Q12789 2109 aa11.5□□□□□ -0.57
HERPUD1-204ENST00000439977 LINC00587B1AMM8 73 aa11.49□□□□□ -0.57
HERPUD1-204ENST00000439977 SCAF4O95104 1147 aaKnown RBP11.49□□□□□ -0.57
HERPUD1-204ENST00000439977 IGLV2-14P01704 120 aa11.49□□□□□ -0.57
HERPUD1-204ENST00000439977 CTXN2P0C2S0 81 aa11.49□□□□□ -0.57
HERPUD1-204ENST00000439977 HLA-DRB3P79483 266 aa11.49□□□□□ -0.57
HERPUD1-204ENST00000439977 WDR86Q86TI4 376 aa11.49□□□□□ -0.57
HERPUD1-204ENST00000439977 OR10V1Q8NGI7 309 aa11.49□□□□□ -0.57
HERPUD1-204ENST00000439977 OR2J1Q9GZK6 312 aa11.49□□□□□ -0.57
HERPUD1-204ENST00000439977 RPRMQ9NS64 109 aa11.49□□□□□ -0.57
HERPUD1-204ENST00000439977 KIAA1456Q9P272 454 aa11.49□□□□□ -0.57
HERPUD1-204ENST00000439977 LNP1A1A4G5 178 aa11.49□□□□□ -0.57
HERPUD1-204ENST00000439977 HMGB3O15347 200 aaKnown RBP11.49□□□□□ -0.57
HERPUD1-204ENST00000439977 CXCL1P09341 107 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms