RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 EFNA2O43921 213 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 BCL2P10415 239 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 AADACP22760 399 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 TAS2R30P59541 319 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 SRPXP78539 464 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 KCNMB1Q16558 191 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 MPV17LQ2QL34 196 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 ATP1A1-AS1Q5TC04 95 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 C16orf47Q6ZP98 133 aaPredicted RBP7.36□□□□□ -1.23
HPS4-206ENST00000439453 SLC25A26Q70HW3 274 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 SPIN2AQ99865 258 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 SPIN2BQ9BPZ2 258 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 CFAP46Q8IYW2 2715 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 A0A0U1RQV5 110 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 OPN1LWP04000 364 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 TK1P04183 234 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 NR2C1P13056 603 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 CTSSP25774 331 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 ARL4DP49703 201 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 MTCP1P56278 107 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 BAXQ07812 192 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 C17orf67Q0P5P2 114 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 ZNF154Q13106 437 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 MYBPHQ13203 477 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 BRICD5Q6PL45 260 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 ZNF695Q8IW36 515 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 H1FOOQ8IZA3 346 aaPredicted RBP7.36□□□□□ -1.23
HPS4-206ENST00000439453 IL22RA1Q8N6P7 574 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 ADGRG7Q96K78 797 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 ATP5SQ99766 215 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 TMEM222Q9H0R3 208 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 ZNF286AQ9HBT8 521 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 GPR173Q9NS66 373 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 VAX2Q9UIW0 290 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 RELNP78509 3460 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 ADAM20O43506 726 aa7.35□□□□□ -1.23
HPS4-206ENST00000439453 SPRY1O43609 319 aaPredicted RBP7.35□□□□□ -1.23
HPS4-206ENST00000439453 TRAF3IP2O43734 574 aaPredicted RBP7.35□□□□□ -1.23
HPS4-206ENST00000439453 TMEM50AO95807 157 aa7.35□□□□□ -1.23
HPS4-206ENST00000439453 UMODP07911 640 aa7.35□□□□□ -1.23
HPS4-206ENST00000439453 MMP9P14780 707 aa7.35□□□□□ -1.23
HPS4-206ENST00000439453 P2RY6Q15077 328 aa7.35□□□□□ -1.23
HPS4-206ENST00000439453 ABHD14BQ96IU4 210 aa7.35□□□□□ -1.23
HPS4-206ENST00000439453 ZNF665Q9H7R5 613 aa7.35□□□□□ -1.23
HPS4-206ENST00000439453 UBE2J1Q9Y385 318 aaPredicted RBP7.35□□□□□ -1.23
HPS4-206ENST00000439453 SLC33A1O00400 549 aaPredicted RBP7.35□□□□□ -1.23
HPS4-206ENST00000439453 CD55P08174 381 aa7.35□□□□□ -1.23
HPS4-206ENST00000439453 RAB35Q15286 201 aa7.35□□□□□ -1.23
HPS4-206ENST00000439453 ZNF787Q6DD87 383 aa7.35□□□□□ -1.23
HPS4-206ENST00000439453 THNSL2Q86YJ6 484 aa7.35□□□□□ -1.23
HPS4-206ENST00000439453 SELENOHQ8IZQ5 122 aaKnown RBP7.35□□□□□ -1.23
HPS4-206ENST00000439453 P4HTMQ9NXG6 502 aa7.35□□□□□ -1.23
HPS4-206ENST00000439453 IGLV3-12A0A075B6K2 115 aa7.35□□□□□ -1.23
HPS4-206ENST00000439453 A0A1B0GX78 115 aa7.35□□□□□ -1.23
HPS4-206ENST00000439453 ZNF705FA8MVS1 300 aaPredicted RBP7.35□□□□□ -1.23
HPS4-206ENST00000439453 PFN1P07737 140 aaKnown RBP7.35□□□□□ -1.23
HPS4-206ENST00000439453 OR4A8P0C604 315 aa7.35□□□□□ -1.23
HPS4-206ENST00000439453 ZNF705DP0CH99 300 aaPredicted RBP7.35□□□□□ -1.23
HPS4-206ENST00000439453 ZNF705BP0CI00 300 aaPredicted RBP7.35□□□□□ -1.23
HPS4-206ENST00000439453 RAB4AP20338 218 aa7.35□□□□□ -1.23
HPS4-206ENST00000439453 HNF4GQ14541 408 aa7.35□□□□□ -1.23
HPS4-206ENST00000439453 WDR25Q64LD2 544 aaPredicted RBP7.35□□□□□ -1.23
HPS4-206ENST00000439453 GPR137CQ8N3F9 429 aa7.35□□□□□ -1.23
HPS4-206ENST00000439453 TMEM56Q96MV1 263 aa7.35□□□□□ -1.23
HPS4-206ENST00000439453 PYGO2Q9BRQ0 406 aa7.35□□□□□ -1.23
HPS4-206ENST00000439453 LAMP3Q9UQV4 416 aa7.35□□□□□ -1.23
HPS4-206ENST00000439453 TMEM56-RWDD3S4R434 201 aa7.35□□□□□ -1.23
HPS4-206ENST00000439453 M0R143 59 aa7.34□□□□□ -1.23
HPS4-206ENST00000439453 ETV2O00321 342 aaPredicted RBP7.34□□□□□ -1.23
HPS4-206ENST00000439453 NXPH3O95157 252 aa7.34□□□□□ -1.23
HPS4-206ENST00000439453 ZNF25P17030 456 aaPredicted RBP7.34□□□□□ -1.23
HPS4-206ENST00000439453 SUMO3P55854 103 aaPredicted RBP7.34□□□□□ -1.23
HPS4-206ENST00000439453 IL24Q13007 206 aa7.34□□□□□ -1.23
HPS4-206ENST00000439453 C16orf82Q7Z2V1 217 aa7.34□□□□□ -1.23
HPS4-206ENST00000439453 PTRH2Q9Y3E5 179 aaKnown RBP7.34□□□□□ -1.23
HPS4-206ENST00000439453 C21orf140B9A014 251 aa7.34□□□□□ -1.23
HPS4-206ENST00000439453 NKX2-8O15522 239 aa7.34□□□□□ -1.23
HPS4-206ENST00000439453 CHST1O43916 411 aa7.34□□□□□ -1.23
HPS4-206ENST00000439453 PPYP01298 95 aa7.34□□□□□ -1.23
HPS4-206ENST00000439453 ID3Q02535 119 aa7.34□□□□□ -1.23
HPS4-206ENST00000439453 PAX5Q02548 391 aa7.34□□□□□ -1.23
HPS4-206ENST00000439453 LCN15Q6UWW0 184 aa7.34□□□□□ -1.23
HPS4-206ENST00000439453 ZNF66Q6ZN08 573 aa7.34□□□□□ -1.23
HPS4-206ENST00000439453 FAM185AQ8N0U4 392 aa7.34□□□□□ -1.23
HPS4-206ENST00000439453 SIGLEC12Q96PQ1 595 aa7.34□□□□□ -1.23
HPS4-206ENST00000439453 CBLN4Q9NTU7 201 aa7.34□□□□□ -1.23
HPS4-206ENST00000439453 CACNA1GO43497 2377 aa7.34□□□□□ -1.23
HPS4-206ENST00000439453 ZNF814B7Z6K7 855 aa7.34□□□□□ -1.23
HPS4-206ENST00000439453 SOX15O60248 233 aa7.34□□□□□ -1.23
HPS4-206ENST00000439453 PDLIM4P50479 330 aa7.34□□□□□ -1.23
HPS4-206ENST00000439453 TMPRSS3P57727 454 aa7.34□□□□□ -1.23
HPS4-206ENST00000439453 TBC1D26Q86UD7 250 aa7.34□□□□□ -1.23
HPS4-206ENST00000439453 MRPL41Q8IXM3 137 aaKnown RBP7.34□□□□□ -1.23
HPS4-206ENST00000439453 NECAP1Q8NC96 275 aa7.34□□□□□ -1.23
HPS4-206ENST00000439453 C10orf35Q96D05 121 aa7.34□□□□□ -1.23
HPS4-206ENST00000439453 ACY3Q96HD9 319 aa7.34□□□□□ -1.23
HPS4-206ENST00000439453 RPRMQ9NS64 109 aa7.34□□□□□ -1.23
HPS4-206ENST00000439453 A0A1W2PNR3 127 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 MARCH11A6NNE9 402 aa7.33□□□□□ -1.24
HPS4-206ENST00000439453 IFNA5P01569 189 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms