RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 ATPAF2Q8N5M1 289 aa2.38□□□□□ -2.03
LSM1P1-201ENST00000438629 OR4M2Q8NGB6 313 aa2.38□□□□□ -2.03
LSM1P1-201ENST00000438629 OR4P4Q8NGL7 312 aa2.38□□□□□ -2.03
LSM1P1-201ENST00000438629 OR2T29Q8NH02 315 aa2.38□□□□□ -2.03
LSM1P1-201ENST00000438629 OR1S1Q8NH92 325 aa2.38□□□□□ -2.03
LSM1P1-201ENST00000438629 EEF1AKMT1Q8WVE0 214 aa2.38□□□□□ -2.03
LSM1P1-201ENST00000438629 FAM3DQ96BQ1 224 aa2.38□□□□□ -2.03
LSM1P1-201ENST00000438629 PYURFQ96I23 114 aa2.38□□□□□ -2.03
LSM1P1-201ENST00000438629 KLF6Q99612 283 aaPredicted RBP2.38□□□□□ -2.03
LSM1P1-201ENST00000438629 SIGMAR1Q99720 223 aa2.38□□□□□ -2.03
LSM1P1-201ENST00000438629 MS4A8Q9BY19 250 aa2.38□□□□□ -2.03
LSM1P1-201ENST00000438629 CHST5Q9GZS9 411 aa2.38□□□□□ -2.03
LSM1P1-201ENST00000438629 ABCG5Q9H222 651 aa2.38□□□□□ -2.03
LSM1P1-201ENST00000438629 MAP1LC3AQ9H492 121 aa2.38□□□□□ -2.03
LSM1P1-201ENST00000438629 FAM96AQ9H5X1 160 aa2.38□□□□□ -2.03
LSM1P1-201ENST00000438629 LRTM1Q9HBL6 345 aa2.38□□□□□ -2.03
LSM1P1-201ENST00000438629 TAS2R13Q9NYV9 303 aa2.38□□□□□ -2.03
LSM1P1-201ENST00000438629 COPZ2Q9P299 210 aa2.38□□□□□ -2.03
LSM1P1-201ENST00000438629 ZNF629Q9UEG4 869 aaPredicted RBP2.38□□□□□ -2.03
LSM1P1-201ENST00000438629 GNG8Q9UK08 70 aa2.38□□□□□ -2.03
LSM1P1-201ENST00000438629 JPT1Q9UK76 154 aa2.38□□□□□ -2.03
LSM1P1-201ENST00000438629 PSG8Q9UQ74 426 aa2.38□□□□□ -2.03
LSM1P1-201ENST00000438629 KLF12Q9Y4X4 402 aa2.38□□□□□ -2.03
LSM1P1-201ENST00000438629 SNX10Q9Y5X0 201 aa2.38□□□□□ -2.03
LSM1P1-201ENST00000438629 CHD1O14646 1710 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 NACAE9PAV3 2078 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 MTCL1Q9Y4B5 1905 aaKnown RBP2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 OVOS2A0A0J9YW53 1432 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 OVOS2Q6IE36 1432 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 CASZ1Q86V15 1759 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 IGKV2D-24A0A075B6R9 120 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 TRAV8-4A0A0B4J246 113 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 SMIM31A0A1B0GVY4 71 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 M0R1B8 84 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 SLC17A3O00476 420 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 GABRPO00591 440 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 TCF21O43680 179 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 SYNGR1O43759 233 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 TPST1O60507 370 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 SPAG7O75391 227 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 RDH16O75452 317 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 P01737 135 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 C1QBP02746 253 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 PRB2P02812 416 aaPredicted RBP2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 MMP7P09237 267 aaPredicted RBP2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 OR5H8P0DN80 308 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 OR13C7P0DN81 318 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 CYBAP13498 195 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 HTR1DP28221 377 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 RPL12P30050 165 aaKnown RBP2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 S100A11P31949 105 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 PPICP45877 212 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 LGALS7P47929 136 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 DLX6P56179 175 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 TCTAP57738 103 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 PFN3P60673 137 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 RPS20P60866 119 aaKnown RBP2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 RRAS2P62070 204 aaPredicted RBP2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 RAP1AP62834 184 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 BIKQ13323 160 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 FZD2Q14332 565 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 EDDM3AQ14507 147 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 UBE2SQ16763 222 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 CLEC12BQ2HXU8 276 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 LRRC75BQ2VPJ9 315 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 TFDP3Q5H9I0 405 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 HENMT1Q5T8I9 393 aaKnown RBP2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 LCN12Q6JVE5 192 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 UGT2A3Q6UWM9 527 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 TEX43Q6ZNM6 134 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 TMPPEQ6ZT21 453 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 SLC16A13Q7RTY0 426 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 GLT6D1Q7Z4J2 308 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 PCP2Q8IVA1 136 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 C10orf107Q8IVU9 208 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 CTAGE3PQ8IX95 158 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 CPNE9Q8IYJ1 553 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 H1FOOQ8IZA3 346 aaPredicted RBP2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 C4orf33Q8N1A6 199 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 OR13G1Q8NGZ3 307 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 OR13C6PQ8NH95 151 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 NT5CQ8TCD5 201 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 SPPL2BQ8TCT7 592 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 GNPDA2Q8TDQ7 276 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 Q8WTZ3 238 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 SFT2D1Q8WV19 159 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 TMEM158Q8WZ71 300 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 SEH1LQ96EE3 360 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 IMP4Q96G21 291 aaKnown RBP2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 AURKBQ96GD4 344 aaPredicted RBP2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 SMARCD1Q96GM5 515 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 RBP7Q96R05 134 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 GINS3Q9BRX5 216 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 PDCD10Q9BUL8 212 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 C1orf50Q9BV19 199 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 TAPBPLQ9BX59 468 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 TBL1XR1Q9BZK7 514 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 LINC00597Q9H2U6 94 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 ENY2Q9NPA8 101 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 CYTL1Q9NRR1 136 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms