RNA–Protein interactions for RNA: ENST00000436282.1

TOP3B-206, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 2,890 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-206ENST00000436282 FAM90A7PA6NKC0 464 aa12.78□□□□□ -0.36
TOP3B-206ENST00000436282 FAM90A22PA8MWA6 464 aa12.78□□□□□ -0.36
TOP3B-206ENST00000436282 FAM90A12PA8MX19 464 aa12.78□□□□□ -0.36
TOP3B-206ENST00000436282 FAM90A5PA8MXJ8 464 aa12.78□□□□□ -0.36
TOP3B-206ENST00000436282 FAM90A23PA8MXZ1 464 aa12.78□□□□□ -0.36
TOP3B-206ENST00000436282 H3BP45 60 aa12.78□□□□□ -0.36
TOP3B-206ENST00000436282 SCTP09683 121 aa12.78□□□□□ -0.36
TOP3B-206ENST00000436282 FAM90A15PP0C7V4 464 aa12.78□□□□□ -0.36
TOP3B-206ENST00000436282 FAM90A13PP0C7W8 464 aa12.78□□□□□ -0.36
TOP3B-206ENST00000436282 FAM90A14PP0C7W9 464 aa12.78□□□□□ -0.36
TOP3B-206ENST00000436282 FAM90A24PP0C7X0 464 aa12.78□□□□□ -0.36
TOP3B-206ENST00000436282 JMJD7P0C870 316 aa12.78□□□□□ -0.36
TOP3B-206ENST00000436282 SSR4P51571 173 aa12.78□□□□□ -0.36
TOP3B-206ENST00000436282 RPS18P62269 152 aaKnown RBP12.78□□□□□ -0.36
TOP3B-206ENST00000436282 TMEM267Q0VDI3 215 aaPredicted RBP12.78□□□□□ -0.36
TOP3B-206ENST00000436282 ACSF3Q4G176 576 aaPredicted RBP12.78□□□□□ -0.36
TOP3B-206ENST00000436282 ZNF468Q5VIY5 522 aaPredicted RBP12.78□□□□□ -0.36
TOP3B-206ENST00000436282 C5orf24Q7Z6I8 188 aa12.78□□□□□ -0.36
TOP3B-206ENST00000436282 RPS19BP1Q86WX3 136 aaKnown RBP12.78□□□□□ -0.36
TOP3B-206ENST00000436282 ZNF295-AS1Q8N0V1 137 aa12.78□□□□□ -0.36
TOP3B-206ENST00000436282 RAB40CQ96S21 281 aa12.78□□□□□ -0.36
TOP3B-206ENST00000436282 WDR54Q9H977 334 aa12.78□□□□□ -0.36
TOP3B-206ENST00000436282 ZNF816-ZNF321PA0A0X1KG74 233 aa12.78□□□□□ -0.36
TOP3B-206ENST00000436282 ZNF32P17041 273 aa12.78□□□□□ -0.36
TOP3B-206ENST00000436282 ZNF92Q03936 586 aa12.78□□□□□ -0.36
TOP3B-206ENST00000436282 HERPUD1Q15011 391 aa12.78□□□□□ -0.36
TOP3B-206ENST00000436282 COA6Q5JTJ3 125 aaKnown RBP12.78□□□□□ -0.36
TOP3B-206ENST00000436282 SLC25A26Q70HW3 274 aa12.78□□□□□ -0.36
TOP3B-206ENST00000436282 C17orf78Q8N4C9 275 aa12.78□□□□□ -0.36
TOP3B-206ENST00000436282 RAB24Q969Q5 203 aa12.78□□□□□ -0.36
TOP3B-206ENST00000436282 PSMG3Q9BT73 122 aaPredicted RBP12.78□□□□□ -0.36
TOP3B-206ENST00000436282 NDUFAF3Q9BU61 184 aa12.78□□□□□ -0.36
TOP3B-206ENST00000436282 VSIRQ9H7M9 311 aa12.78□□□□□ -0.36
TOP3B-206ENST00000436282 KIAA1549Q9HCM3 1950 aa12.77□□□□□ -0.36
TOP3B-206ENST00000436282 TNFSF11O14788 317 aa12.77□□□□□ -0.36
TOP3B-206ENST00000436282 NAPSAO96009 420 aa12.77□□□□□ -0.36
TOP3B-206ENST00000436282 COL10A1Q03692 680 aa12.77□□□□□ -0.36
TOP3B-206ENST00000436282 CLN3Q13286 438 aa12.77□□□□□ -0.36
TOP3B-206ENST00000436282 TRIM61Q5EBN2 209 aa12.77□□□□□ -0.36
TOP3B-206ENST00000436282 ABLIM2Q6H8Q1 611 aa12.77□□□□□ -0.36
TOP3B-206ENST00000436282 MRGPRGQ86SM5 289 aa12.77□□□□□ -0.36
TOP3B-206ENST00000436282 BATF2Q8N1L9 274 aa12.77□□□□□ -0.36
TOP3B-206ENST00000436282 ZNF664Q8N3J9 261 aa12.77□□□□□ -0.36
TOP3B-206ENST00000436282 PYGO2Q9BRQ0 406 aa12.77□□□□□ -0.36
TOP3B-206ENST00000436282 TMEM38BQ9NVV0 291 aa12.77□□□□□ -0.36
TOP3B-206ENST00000436282 OR14J1Q9UGF5 321 aa12.77□□□□□ -0.36
TOP3B-206ENST00000436282 AHCTF1Q8WYP5 2266 aa12.77□□□□□ -0.37
TOP3B-206ENST00000436282 LOC102723996A0A087X1L8 192 aa12.77□□□□□ -0.37
TOP3B-206ENST00000436282 CEBPZOSA8MTT3 80 aa12.77□□□□□ -0.37
TOP3B-206ENST00000436282 IFNA1P01562 189 aa12.77□□□□□ -0.37
TOP3B-206ENST00000436282 SLC25A6P12236 298 aa12.77□□□□□ -0.37
TOP3B-206ENST00000436282 FGF8P55075 233 aaPredicted RBP12.77□□□□□ -0.37
TOP3B-206ENST00000436282 RAB4BP61018 213 aa12.77□□□□□ -0.37
TOP3B-206ENST00000436282 WDR25Q64LD2 544 aaPredicted RBP12.77□□□□□ -0.37
TOP3B-206ENST00000436282 BEND2Q8NDZ0 799 aa12.77□□□□□ -0.37
TOP3B-206ENST00000436282 Q8NFD4 153 aa12.77□□□□□ -0.37
TOP3B-206ENST00000436282 NAT8Q9UHE5 227 aa12.77□□□□□ -0.37
TOP3B-206ENST00000436282 FREM2Q5SZK8 3169 aa12.77□□□□□ -0.37
TOP3B-206ENST00000436282 A0A0G2JRQ6 117 aa12.76□□□□□ -0.37
TOP3B-206ENST00000436282 ZIC3O60481 467 aa12.76□□□□□ -0.37
TOP3B-206ENST00000436282 LIFP15018 202 aa12.76□□□□□ -0.37
TOP3B-206ENST00000436282 CLDN15P56746 228 aa12.76□□□□□ -0.37
TOP3B-206ENST00000436282 SSX7Q7RTT5 188 aa12.76□□□□□ -0.37
TOP3B-206ENST00000436282 UBALD2Q8IYN6 164 aa12.76□□□□□ -0.37
TOP3B-206ENST00000436282 PROK2Q9HC23 129 aa12.76□□□□□ -0.37
TOP3B-206ENST00000436282 GAB2Q9UQC2 676 aa12.76□□□□□ -0.37
TOP3B-206ENST00000436282 KIR2DS1A0A191URI9 304 aa12.76□□□□□ -0.37
TOP3B-206ENST00000436282 KIAA1324LA8MWY0 1029 aaPredicted RBP12.76□□□□□ -0.37
TOP3B-206ENST00000436282 LAMTOR5O43504 91 aa12.76□□□□□ -0.37
TOP3B-206ENST00000436282 PGLYRP1O75594 196 aaPredicted RBP12.76□□□□□ -0.37
TOP3B-206ENST00000436282 CNOT4O95628 575 aaKnown RBP12.76□□□□□ -0.37
TOP3B-206ENST00000436282 PFN1P07737 140 aaKnown RBP12.76□□□□□ -0.37
TOP3B-206ENST00000436282 OTX2P32243 289 aa12.76□□□□□ -0.37
TOP3B-206ENST00000436282 KIR2DS4P43632 304 aa12.76□□□□□ -0.37
TOP3B-206ENST00000436282 KIR2DS1Q14954 304 aa12.76□□□□□ -0.37
TOP3B-206ENST00000436282 YRDCQ86U90 279 aaKnown RBP12.76□□□□□ -0.37
TOP3B-206ENST00000436282 GPR146Q96CH1 333 aa12.76□□□□□ -0.37
TOP3B-206ENST00000436282 AGMATQ9BSE5 352 aa12.76□□□□□ -0.37
TOP3B-206ENST00000436282 COLQQ9Y215 455 aaPredicted RBP12.76□□□□□ -0.37
TOP3B-206ENST00000436282 PIGBOS1A0A0B4J2F0 54 aa12.75□□□□□ -0.37
TOP3B-206ENST00000436282 A0A0J9YW62 118 aa12.75□□□□□ -0.37
TOP3B-206ENST00000436282 TNFSF12O43508 249 aa12.75□□□□□ -0.37
TOP3B-206ENST00000436282 GCGP01275 180 aa12.75□□□□□ -0.37
TOP3B-206ENST00000436282 CTXN2P0C2S0 81 aa12.75□□□□□ -0.37
TOP3B-206ENST00000436282 PATE4P0C8F1 98 aa12.75□□□□□ -0.37
TOP3B-206ENST00000436282 F2RP25116 425 aa12.75□□□□□ -0.37
TOP3B-206ENST00000436282 MDH2P40926 338 aaKnown RBP12.75□□□□□ -0.37
TOP3B-206ENST00000436282 USF2Q15853 346 aaPredicted RBP12.75□□□□□ -0.37
TOP3B-206ENST00000436282 NCR3LG1Q68D85 454 aa12.75□□□□□ -0.37
TOP3B-206ENST00000436282 C16orf82Q7Z2V1 217 aa12.75□□□□□ -0.37
TOP3B-206ENST00000436282 TGIF2LYQ8IUE0 185 aa12.75□□□□□ -0.37
TOP3B-206ENST00000436282 OR2Y1Q8NGV0 311 aa12.75□□□□□ -0.37
TOP3B-206ENST00000436282 CD55P08174 381 aa12.75□□□□□ -0.37
TOP3B-206ENST00000436282 B4GALT1P15291 398 aa12.75□□□□□ -0.37
TOP3B-206ENST00000436282 DSCR4P56555 118 aaPredicted RBP12.75□□□□□ -0.37
TOP3B-206ENST00000436282 SERF2P84101 59 aa12.75□□□□□ -0.37
TOP3B-206ENST00000436282 PSG4Q00888 419 aa12.75□□□□□ -0.37
TOP3B-206ENST00000436282 ADIRFQ15847 76 aa12.75□□□□□ -0.37
TOP3B-206ENST00000436282 CYP2G1PQ6ZSU1 146 aa12.75□□□□□ -0.37
TOP3B-206ENST00000436282 ZNF525Q8N782 197 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms