RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 FAM27D1Q5T7N8 215 aa12.47□□□□□ -0.41
NUP50-210ENST00000434760 RAB12Q6IQ22 244 aa12.47□□□□□ -0.41
NUP50-210ENST00000434760 STX19Q8N4C7 294 aa12.47□□□□□ -0.41
NUP50-210ENST00000434760 WFDC9Q8NEX5 89 aa12.47□□□□□ -0.41
NUP50-210ENST00000434760 OR4X2Q8NGF9 303 aa12.47□□□□□ -0.41
NUP50-210ENST00000434760 NEK7Q8TDX7 302 aa12.47□□□□□ -0.41
NUP50-210ENST00000434760 CCDC107Q8WV48 283 aa12.47□□□□□ -0.41
NUP50-210ENST00000434760 SGCDQ92629 289 aa12.47□□□□□ -0.41
NUP50-210ENST00000434760 BANF2Q9H503 90 aa12.47□□□□□ -0.41
NUP50-210ENST00000434760 TSSC4Q9Y5U2 329 aaPredicted RBP12.47□□□□□ -0.41
NUP50-210ENST00000434760 CDK1P06493 297 aa12.46□□□□□ -0.41
NUP50-210ENST00000434760 VHLP40337 213 aa12.46□□□□□ -0.41
NUP50-210ENST00000434760 C9orf152Q5JTZ5 239 aa12.46□□□□□ -0.41
NUP50-210ENST00000434760 C6orf141Q5SZD1 244 aa12.46□□□□□ -0.41
NUP50-210ENST00000434760 RNLSQ5VYX0 342 aa12.46□□□□□ -0.41
NUP50-210ENST00000434760 ETV3LQ6ZN32 361 aa12.46□□□□□ -0.41
NUP50-210ENST00000434760 CENPVQ7Z7K6 275 aaPredicted RBP12.46□□□□□ -0.41
NUP50-210ENST00000434760 THRSPQ92748 146 aa12.46□□□□□ -0.41
NUP50-210ENST00000434760 UQCC2Q9BRT2 126 aa12.46□□□□□ -0.41
NUP50-210ENST00000434760 MBNL3Q9NUK0 354 aaKnown RBP12.46□□□□□ -0.41
NUP50-210ENST00000434760 ETAA1Q9NY74 926 aa12.46□□□□□ -0.41
NUP50-210ENST00000434760 NKX1-2Q9UD57 310 aaPredicted RBP12.46□□□□□ -0.41
NUP50-210ENST00000434760 IGHV3-72A0A0B4J1Y9 119 aa12.45□□□□□ -0.42
NUP50-210ENST00000434760 TCRBV4S1A1TA0A5B7 111 aa12.45□□□□□ -0.42
NUP50-210ENST00000434760 CCRL2O00421 344 aa12.45□□□□□ -0.42
NUP50-210ENST00000434760 RCC1P18754 421 aaPredicted RBP12.45□□□□□ -0.42
NUP50-210ENST00000434760 MAPK3P27361 379 aaPredicted RBP12.45□□□□□ -0.42
NUP50-210ENST00000434760 HES1Q14469 280 aa12.45□□□□□ -0.42
NUP50-210ENST00000434760 IRF3Q14653 427 aa12.45□□□□□ -0.42
NUP50-210ENST00000434760 TMEM30BQ3MIR4 351 aa12.45□□□□□ -0.42
NUP50-210ENST00000434760 SLC25A48Q6ZT89 311 aaKnown RBP12.45□□□□□ -0.42
NUP50-210ENST00000434760 REC114Q7Z4M0 266 aa12.45□□□□□ -0.42
NUP50-210ENST00000434760 LRRTM1Q86UE6 522 aa12.45□□□□□ -0.42
NUP50-210ENST00000434760 OR4K15Q8NH41 348 aa12.45□□□□□ -0.42
NUP50-210ENST00000434760 RTN4IP1Q8WWV3 396 aaPredicted RBP12.45□□□□□ -0.42
NUP50-210ENST00000434760 EAF1Q96JC9 268 aaPredicted RBP12.45□□□□□ -0.42
NUP50-210ENST00000434760 NOL4LQ96MY1 436 aaPredicted RBP12.45□□□□□ -0.42
NUP50-210ENST00000434760 SELENOIQ9C0D9 397 aa12.45□□□□□ -0.42
NUP50-210ENST00000434760 DNAH9Q9NYC9 4486 aa12.45□□□□□ -0.42
NUP50-210ENST00000434760 PSMB11A5LHX3 300 aa12.44□□□□□ -0.42
NUP50-210ENST00000434760 MCRIP1C9JLW8 97 aa12.44□□□□□ -0.42
NUP50-210ENST00000434760 CRTAPO75718 401 aaPredicted RBP12.44□□□□□ -0.42
NUP50-210ENST00000434760 IGHG2P01859 326 aa12.44□□□□□ -0.42
NUP50-210ENST00000434760 HBZP02008 142 aa12.44□□□□□ -0.42
NUP50-210ENST00000434760 PF4V1P10720 104 aa12.44□□□□□ -0.42
NUP50-210ENST00000434760 AQP4P55087 323 aa12.44□□□□□ -0.42
NUP50-210ENST00000434760 HNF4GQ14541 408 aa12.44□□□□□ -0.42
NUP50-210ENST00000434760 C6orf183Q5T699 404 aa12.44□□□□□ -0.42
NUP50-210ENST00000434760 SYT6Q5T7P8 510 aaPredicted RBP12.44□□□□□ -0.42
NUP50-210ENST00000434760 UNQ9370/PRO34162Q6UXP9 181 aa12.44□□□□□ -0.42
NUP50-210ENST00000434760 OR1L1Q8NH94 360 aa12.44□□□□□ -0.42
NUP50-210ENST00000434760 MRPL30Q8TCC3 161 aaKnown RBP12.44□□□□□ -0.42
NUP50-210ENST00000434760 NRG4Q8WWG1 115 aa12.44□□□□□ -0.42
NUP50-210ENST00000434760 FAM46BQ96A09 425 aa12.44□□□□□ -0.42
NUP50-210ENST00000434760 MND1Q9BWT6 205 aa12.44□□□□□ -0.42
NUP50-210ENST00000434760 VCXQ9H320 206 aa12.44□□□□□ -0.42
NUP50-210ENST00000434760 NECAP2Q9NVZ3 263 aa12.44□□□□□ -0.42
NUP50-210ENST00000434760 AURKAIP1Q9NWT8 199 aaPredicted RBP12.44□□□□□ -0.42
NUP50-210ENST00000434760 ERGIC3Q9Y282 383 aa12.44□□□□□ -0.42
NUP50-210ENST00000434760 PEX16Q9Y5Y5 336 aa12.44□□□□□ -0.42
NUP50-210ENST00000434760 PDCD6O75340 191 aa12.43□□□□□ -0.42
NUP50-210ENST00000434760 CA11O75493 328 aa12.43□□□□□ -0.42
NUP50-210ENST00000434760 GAPDHP04406 335 aaKnown RBP12.43□□□□□ -0.42
NUP50-210ENST00000434760 GLAP06280 429 aa12.43□□□□□ -0.42
NUP50-210ENST00000434760 IGLL1P15814 213 aa12.43□□□□□ -0.42
NUP50-210ENST00000434760 CHATP28329 748 aa12.43□□□□□ -0.42
NUP50-210ENST00000434760 ZNF134P52741 427 aa12.43□□□□□ -0.42
NUP50-210ENST00000434760 SLC35A2P78381 396 aa12.43□□□□□ -0.42
NUP50-210ENST00000434760 GABPB1Q06547 395 aaPredicted RBP12.43□□□□□ -0.42
NUP50-210ENST00000434760 GPR50Q13585 617 aa12.43□□□□□ -0.42
NUP50-210ENST00000434760 GNMTQ14749 295 aa12.43□□□□□ -0.42
NUP50-210ENST00000434760 CT45A1Q5HYN5 189 aa12.43□□□□□ -0.42
NUP50-210ENST00000434760 KHDC1LQ5JSQ8 128 aa12.43□□□□□ -0.42
NUP50-210ENST00000434760 ZNF329Q86UD4 541 aa12.43□□□□□ -0.42
NUP50-210ENST00000434760 TGIF2LXQ8IUE1 241 aa12.43□□□□□ -0.42
NUP50-210ENST00000434760 Q8N9W7 124 aa12.43□□□□□ -0.42
NUP50-210ENST00000434760 OR10V1Q8NGI7 309 aa12.43□□□□□ -0.42
NUP50-210ENST00000434760 CT45A3Q8NHU0 189 aa12.43□□□□□ -0.42
NUP50-210ENST00000434760 PHYHIPQ92561 330 aa12.43□□□□□ -0.42
NUP50-210ENST00000434760 RBMXL1Q96E39 390 aaKnown RBP12.43□□□□□ -0.42
NUP50-210ENST00000434760 KCNK15Q9H427 330 aa12.43□□□□□ -0.42
NUP50-210ENST00000434760 DCLRE1BQ9H816 532 aa12.43□□□□□ -0.42
NUP50-210ENST00000434760 TRAPPC2LQ9UL33 140 aa12.43□□□□□ -0.42
NUP50-210ENST00000434760 ZNF736B4DX44 427 aaPredicted RBP12.42□□□□□ -0.42
NUP50-210ENST00000434760 SPINT2O43291 252 aa12.42□□□□□ -0.42
NUP50-210ENST00000434760 CD37P11049 281 aa12.42□□□□□ -0.42
NUP50-210ENST00000434760 CD33P20138 364 aa12.42□□□□□ -0.42
NUP50-210ENST00000434760 FUT3P21217 361 aa12.42□□□□□ -0.42
NUP50-210ENST00000434760 IL3RAP26951 378 aa12.42□□□□□ -0.42
NUP50-210ENST00000434760 UNC119Q13432 240 aa12.42□□□□□ -0.42
NUP50-210ENST00000434760 ACSM3Q53FZ2 586 aa12.42□□□□□ -0.42
NUP50-210ENST00000434760 C1orf100Q5SVJ3 147 aa12.42□□□□□ -0.42
NUP50-210ENST00000434760 FOXB2Q5VYV0 432 aa12.42□□□□□ -0.42
NUP50-210ENST00000434760 OR10K2Q6IF99 312 aa12.42□□□□□ -0.42
NUP50-210ENST00000434760 TRAT1Q6PIZ9 186 aa12.42□□□□□ -0.42
NUP50-210ENST00000434760 C5orf24Q7Z6I8 188 aa12.42□□□□□ -0.42
NUP50-210ENST00000434760 MOB3BQ86TA1 216 aa12.42□□□□□ -0.42
NUP50-210ENST00000434760 FAM71E2Q8N5Q1 922 aa12.42□□□□□ -0.42
NUP50-210ENST00000434760 LINC00482Q8N8I6 264 aa12.42□□□□□ -0.42
NUP50-210ENST00000434760 TMED9Q9BVK6 235 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms