RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 A0A0B4J293 547 aa9.36□□□□□ -0.91
LINC00539-203ENST00000434601 ODAMA1E959 279 aa9.36□□□□□ -0.91
LINC00539-203ENST00000434601 FUOMA2VDF0 154 aa9.36□□□□□ -0.91
LINC00539-203ENST00000434601 RNF223E7ERA6 249 aa9.36□□□□□ -0.91
LINC00539-203ENST00000434601 TMPRSS2O15393 492 aa9.36□□□□□ -0.91
LINC00539-203ENST00000434601 LY6HO94772 140 aa9.36□□□□□ -0.91
LINC00539-203ENST00000434601 IGHV2-70P01814 119 aa9.36□□□□□ -0.91
LINC00539-203ENST00000434601 SCTP09683 121 aa9.36□□□□□ -0.91
LINC00539-203ENST00000434601 CTXN2P0C2S0 81 aa9.36□□□□□ -0.91
LINC00539-203ENST00000434601 FPR2P25090 351 aa9.36□□□□□ -0.91
LINC00539-203ENST00000434601 ECI1P42126 302 aa9.36□□□□□ -0.91
LINC00539-203ENST00000434601 GLIPR1P48060 266 aa9.36□□□□□ -0.91
LINC00539-203ENST00000434601 MECP2P51608 486 aaKnown RBP9.36□□□□□ -0.91
LINC00539-203ENST00000434601 P2RX3P56373 397 aa9.36□□□□□ -0.91
LINC00539-203ENST00000434601 RAB25P57735 213 aa9.36□□□□□ -0.91
LINC00539-203ENST00000434601 HERPUD1Q15011 391 aa9.36□□□□□ -0.91
LINC00539-203ENST00000434601 C6orf183Q5T699 404 aa9.36□□□□□ -0.91
LINC00539-203ENST00000434601 TRAT1Q6PIZ9 186 aa9.36□□□□□ -0.91
LINC00539-203ENST00000434601 PEG10Q86TG7 708 aaKnown RBP9.36□□□□□ -0.91
LINC00539-203ENST00000434601 ZDHHC22Q8N966 263 aa9.36□□□□□ -0.91
LINC00539-203ENST00000434601 OR6F1Q8NGZ6 308 aa9.36□□□□□ -0.91
LINC00539-203ENST00000434601 GIMAP1Q8WWP7 306 aa9.36□□□□□ -0.91
LINC00539-203ENST00000434601 MRGPRFQ96AM1 343 aa9.36□□□□□ -0.91
LINC00539-203ENST00000434601 MED30Q96HR3 178 aa9.36□□□□□ -0.91
LINC00539-203ENST00000434601 REG4Q9BYZ8 158 aa9.36□□□□□ -0.91
LINC00539-203ENST00000434601 BARX1Q9HBU1 254 aaPredicted RBP9.36□□□□□ -0.91
LINC00539-203ENST00000434601 YLPM1P49750 1951 aaKnown RBP9.35□□□□□ -0.91
LINC00539-203ENST00000434601 NPIPB11E5RHQ5 1161 aa9.35□□□□□ -0.91
LINC00539-203ENST00000434601 TNFRSF13BO14836 293 aaPredicted RBP9.35□□□□□ -0.91
LINC00539-203ENST00000434601 ADAM20O43506 726 aa9.35□□□□□ -0.91
LINC00539-203ENST00000434601 NDUFA2O43678 99 aa9.35□□□□□ -0.91
LINC00539-203ENST00000434601 RLN1P04808 185 aa9.35□□□□□ -0.91
LINC00539-203ENST00000434601 ERP29P30040 261 aaKnown RBP9.35□□□□□ -0.91
LINC00539-203ENST00000434601 BCAP31P51572 246 aa9.35□□□□□ -0.91
LINC00539-203ENST00000434601 EDDM3BP56851 147 aa9.35□□□□□ -0.91
LINC00539-203ENST00000434601 SEC61A1P61619 476 aaKnown RBP9.35□□□□□ -0.91
LINC00539-203ENST00000434601 IGSF11Q5DX21 431 aa9.35□□□□□ -0.91
LINC00539-203ENST00000434601 AADACL3Q5VUY0 350 aa9.35□□□□□ -0.91
LINC00539-203ENST00000434601 ZNF660Q6AZW8 331 aaPredicted RBP9.35□□□□□ -0.91
LINC00539-203ENST00000434601 ZNF554Q86TJ5 538 aa9.35□□□□□ -0.91
LINC00539-203ENST00000434601 MUC20Q8N307 709 aaPredicted RBP9.35□□□□□ -0.91
LINC00539-203ENST00000434601 TPRX1Q8N7U7 411 aa9.35□□□□□ -0.91
LINC00539-203ENST00000434601 OR13A1Q8NGR1 328 aa9.35□□□□□ -0.91
LINC00539-203ENST00000434601 TERB2Q8NHR7 220 aa9.35□□□□□ -0.91
LINC00539-203ENST00000434601 MRGPRDQ8TDS7 321 aa9.35□□□□□ -0.91
LINC00539-203ENST00000434601 TIMD4Q96H15 378 aa9.35□□□□□ -0.91
LINC00539-203ENST00000434601 KIRREL1Q96J84 757 aa9.35□□□□□ -0.91
LINC00539-203ENST00000434601 TMEM246Q9BRR3 403 aa9.35□□□□□ -0.91
LINC00539-203ENST00000434601 ZNF2Q9BSG1 426 aaPredicted RBP9.35□□□□□ -0.91
LINC00539-203ENST00000434601 FXYD6Q9H0Q3 95 aa9.35□□□□□ -0.91
LINC00539-203ENST00000434601 NCOR1P1Q9H4R4 102 aa9.35□□□□□ -0.91
LINC00539-203ENST00000434601 CHODLQ9H9P2 273 aa9.35□□□□□ -0.91
LINC00539-203ENST00000434601 TAF9BQ9HBM6 251 aa9.35□□□□□ -0.91
LINC00539-203ENST00000434601 KCNIP1Q9NZI2 227 aa9.35□□□□□ -0.91
LINC00539-203ENST00000434601 KAAG1Q9UBP8 84 aa9.35□□□□□ -0.91
LINC00539-203ENST00000434601 SLC25A10Q9UBX3 287 aaPredicted RBP9.35□□□□□ -0.91
LINC00539-203ENST00000434601 VSIG4Q9Y279 399 aa9.35□□□□□ -0.91
LINC00539-203ENST00000434601 ALG5Q9Y673 324 aa9.35□□□□□ -0.91
LINC00539-203ENST00000434601 IGKV1-6A0A0C4DH72 117 aa9.34□□□□□ -0.91
LINC00539-203ENST00000434601 C7orf66A4D0T2 115 aa9.34□□□□□ -0.91
LINC00539-203ENST00000434601 OR5H14A6NHG9 310 aa9.34□□□□□ -0.91
LINC00539-203ENST00000434601 CEACAM18A8MTB9 384 aa9.34□□□□□ -0.91
LINC00539-203ENST00000434601 C12orf77C9JDV5 145 aa9.34□□□□□ -0.91
LINC00539-203ENST00000434601 BET1O15155 118 aa9.34□□□□□ -0.91
LINC00539-203ENST00000434601 CD5LO43866 347 aa9.34□□□□□ -0.91
LINC00539-203ENST00000434601 PRAF2O60831 178 aa9.34□□□□□ -0.91
LINC00539-203ENST00000434601 DIRAS3O95661 229 aa9.34□□□□□ -0.91
LINC00539-203ENST00000434601 F12P00748 615 aaPredicted RBP9.34□□□□□ -0.91
LINC00539-203ENST00000434601 ANXA7P20073 488 aaKnown RBP9.34□□□□□ -0.91
LINC00539-203ENST00000434601 FCGR2CP31995 323 aa9.34□□□□□ -0.91
LINC00539-203ENST00000434601 NPY4RP50391 375 aa9.34□□□□□ -0.91
LINC00539-203ENST00000434601 EFNA4P52798 201 aa9.34□□□□□ -0.91
LINC00539-203ENST00000434601 HERV-K104P61576 105 aa9.34□□□□□ -0.91
LINC00539-203ENST00000434601 KRTAP1-1Q07627 177 aa9.34□□□□□ -0.91
LINC00539-203ENST00000434601 SURF2Q15527 256 aaPredicted RBP9.34□□□□□ -0.91
LINC00539-203ENST00000434601 LRRC10Q5BKY1 277 aa9.34□□□□□ -0.91
LINC00539-203ENST00000434601 AVPI1Q5T686 147 aa9.34□□□□□ -0.91
LINC00539-203ENST00000434601 DHRS11Q6UWP2 260 aa9.34□□□□□ -0.91
LINC00539-203ENST00000434601 C5orf24Q7Z6I8 188 aa9.34□□□□□ -0.91
LINC00539-203ENST00000434601 TMED4Q7Z7H5 227 aa9.34□□□□□ -0.91
LINC00539-203ENST00000434601 CADM3Q8N126 398 aa9.34□□□□□ -0.91
LINC00539-203ENST00000434601 PRR18Q8N4B5 295 aa9.34□□□□□ -0.91
LINC00539-203ENST00000434601 MARCH1Q8TCQ1 289 aa9.34□□□□□ -0.91
LINC00539-203ENST00000434601 IL1F10Q8WWZ1 152 aa9.34□□□□□ -0.91
LINC00539-203ENST00000434601 RAB1CQ92928 201 aa9.34□□□□□ -0.91
LINC00539-203ENST00000434601 SCGB3A2Q96PL1 93 aa9.34□□□□□ -0.91
LINC00539-203ENST00000434601 BEX2Q9BXY8 128 aa9.34□□□□□ -0.91
LINC00539-203ENST00000434601 BEX1Q9HBH7 125 aa9.34□□□□□ -0.91
LINC00539-203ENST00000434601 OR6C3Q9NZP0 311 aa9.34□□□□□ -0.91
LINC00539-203ENST00000434601 CTSZQ9UBR2 303 aa9.34□□□□□ -0.91
LINC00539-203ENST00000434601 PCDHB10Q9UN67 800 aa9.34□□□□□ -0.91
LINC00539-203ENST00000434601 TRBV6-7A0A0A0MS04 114 aa9.33□□□□□ -0.92
LINC00539-203ENST00000434601 PPIHO43447 177 aaKnown RBP9.33□□□□□ -0.92
LINC00539-203ENST00000434601 NDUFB3O43676 98 aa9.33□□□□□ -0.92
LINC00539-203ENST00000434601 NDUFS7O75251 213 aa9.33□□□□□ -0.92
LINC00539-203ENST00000434601 PPYP01298 95 aa9.33□□□□□ -0.92
LINC00539-203ENST00000434601 IL5P05113 134 aa9.33□□□□□ -0.92
LINC00539-203ENST00000434601 PGAM2P15259 253 aa9.33□□□□□ -0.92
LINC00539-203ENST00000434601 NDUFB7P17568 137 aa9.33□□□□□ -0.92
LINC00539-203ENST00000434601 AADACP22760 399 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms