RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 LOXL3P58215 753 aa12.18□□□□□ -0.46
GARNL3-204ENST00000429629 MRPS15P82914 257 aaKnown RBP12.18□□□□□ -0.46
GARNL3-204ENST00000429629 HMGN3Q15651 99 aa12.18□□□□□ -0.46
GARNL3-204ENST00000429629 AANATQ16613 207 aa12.18□□□□□ -0.46
GARNL3-204ENST00000429629 SAMD12Q8N8I0 201 aa12.18□□□□□ -0.46
GARNL3-204ENST00000429629 CCDC107Q8WV48 283 aa12.18□□□□□ -0.46
GARNL3-204ENST00000429629 DGCR14Q96DF8 476 aaKnown RBP12.18□□□□□ -0.46
GARNL3-204ENST00000429629 MALSU1Q96EH3 234 aa12.18□□□□□ -0.46
GARNL3-204ENST00000429629 JMJD8Q96S16 334 aa12.18□□□□□ -0.46
GARNL3-204ENST00000429629 Q9N2K0 584 aa12.18□□□□□ -0.46
GARNL3-204ENST00000429629 RSL24D1Q9UHA3 163 aaKnown RBP12.18□□□□□ -0.46
GARNL3-204ENST00000429629 ZFHX3Q15911 3703 aa12.17□□□□□ -0.46
GARNL3-204ENST00000429629 A0A075B6Q4 140 aa12.17□□□□□ -0.46
GARNL3-204ENST00000429629 SSTR5P35346 364 aa12.17□□□□□ -0.46
GARNL3-204ENST00000429629 LGALS4P56470 323 aa12.17□□□□□ -0.46
GARNL3-204ENST00000429629 PRAMEF5Q5TYX0 476 aa12.17□□□□□ -0.46
GARNL3-204ENST00000429629 RBMS3Q6XE24 437 aaKnown RBP12.17□□□□□ -0.46
GARNL3-204ENST00000429629 ZNF782Q6ZMW2 699 aaPredicted RBP12.17□□□□□ -0.46
GARNL3-204ENST00000429629 PNKDQ8N490 385 aa12.17□□□□□ -0.46
GARNL3-204ENST00000429629 LINC00311Q8N616 119 aa12.17□□□□□ -0.46
GARNL3-204ENST00000429629 OR9G1Q8NH87 305 aa12.17□□□□□ -0.46
GARNL3-204ENST00000429629 GALMQ96C23 342 aa12.17□□□□□ -0.46
GARNL3-204ENST00000429629 MEGF9Q9H1U4 602 aa12.17□□□□□ -0.46
GARNL3-204ENST00000429629 CHMP1AQ9HD42 196 aaPredicted RBP12.17□□□□□ -0.46
GARNL3-204ENST00000429629 GFOD1Q9NXC2 390 aa12.17□□□□□ -0.46
GARNL3-204ENST00000429629 COMMD3Q9UBI1 195 aa12.17□□□□□ -0.46
GARNL3-204ENST00000429629 MEX3AA1L020 520 aaKnown RBP12.16□□□□□ -0.46
GARNL3-204ENST00000429629 CLDN34H7C241 214 aa12.16□□□□□ -0.46
GARNL3-204ENST00000429629 HBZP02008 142 aa12.16□□□□□ -0.46
GARNL3-204ENST00000429629 FBP1P09467 338 aa12.16□□□□□ -0.46
GARNL3-204ENST00000429629 OMGP23515 440 aa12.16□□□□□ -0.46
GARNL3-204ENST00000429629 SAA4P35542 130 aa12.16□□□□□ -0.46
GARNL3-204ENST00000429629 TALDO1P37837 337 aa12.16□□□□□ -0.46
GARNL3-204ENST00000429629 GDNFP39905 211 aa12.16□□□□□ -0.46
GARNL3-204ENST00000429629 MNDAP41218 407 aa12.16□□□□□ -0.46
GARNL3-204ENST00000429629 KIR2DS4P43632 304 aa12.16□□□□□ -0.46
GARNL3-204ENST00000429629 KIR2DS1Q14954 304 aa12.16□□□□□ -0.46
GARNL3-204ENST00000429629 BRD3OSQ6XYD6 125 aa12.16□□□□□ -0.46
GARNL3-204ENST00000429629 TMEM86BQ8N661 226 aa12.16□□□□□ -0.46
GARNL3-204ENST00000429629 RFESDQ8TAC1 157 aa12.16□□□□□ -0.46
GARNL3-204ENST00000429629 AJUBAQ96IF1 538 aa12.16□□□□□ -0.46
GARNL3-204ENST00000429629 AUNIPQ9H7T9 357 aa12.16□□□□□ -0.46
GARNL3-204ENST00000429629 JPT1Q9UK76 154 aa12.16□□□□□ -0.46
GARNL3-204ENST00000429629 FAM96BQ9Y3D0 163 aa12.16□□□□□ -0.46
GARNL3-204ENST00000429629 A3GALT2U3KPV4 340 aa12.16□□□□□ -0.46
GARNL3-204ENST00000429629 TRAV18A0A075B6X5 111 aa12.15□□□□□ -0.46
GARNL3-204ENST00000429629 TRAV39A0A0B4J263 110 aa12.15□□□□□ -0.46
GARNL3-204ENST00000429629 MEIOCA2RUB1 952 aa12.15□□□□□ -0.46
GARNL3-204ENST00000429629 OOSP1A8MZH6 123 aa12.15□□□□□ -0.46
GARNL3-204ENST00000429629 TRDCB7Z8K6 153 aa12.15□□□□□ -0.46
GARNL3-204ENST00000429629 TOR1AO14656 332 aa12.15□□□□□ -0.46
GARNL3-204ENST00000429629 ITGB1BP1O14713 200 aa12.15□□□□□ -0.46
GARNL3-204ENST00000429629 YPEL1O60688 119 aa12.15□□□□□ -0.46
GARNL3-204ENST00000429629 FCGR3AP08637 254 aa12.15□□□□□ -0.46
GARNL3-204ENST00000429629 HILS1P60008 231 aa12.15□□□□□ -0.46
GARNL3-204ENST00000429629 KLRD1Q13241 179 aa12.15□□□□□ -0.46
GARNL3-204ENST00000429629 ARFRP1Q13795 201 aa12.15□□□□□ -0.46
GARNL3-204ENST00000429629 Q6YL49 198 aa12.15□□□□□ -0.46
GARNL3-204ENST00000429629 Q6ZPA2 131 aa12.15□□□□□ -0.46
GARNL3-204ENST00000429629 LDLRAD3Q86YD5 345 aa12.15□□□□□ -0.46
GARNL3-204ENST00000429629 BCL6BQ8N143 479 aaPredicted RBP12.15□□□□□ -0.46
GARNL3-204ENST00000429629 C15orf40Q8WUR7 153 aa12.15□□□□□ -0.46
GARNL3-204ENST00000429629 YPEL2Q96QA6 119 aa12.15□□□□□ -0.46
GARNL3-204ENST00000429629 OCSTAMPQ9BR26 566 aa12.15□□□□□ -0.46
GARNL3-204ENST00000429629 SLIRPQ9GZT3 109 aaKnown RBP12.15□□□□□ -0.46
GARNL3-204ENST00000429629 NXF2Q9GZY0 626 aaKnown RBP12.15□□□□□ -0.46
GARNL3-204ENST00000429629 TOLLIPQ9H0E2 274 aa12.15□□□□□ -0.46
GARNL3-204ENST00000429629 GHITMQ9H3K2 345 aa12.15□□□□□ -0.46
GARNL3-204ENST00000429629 ZMAT3Q9HA38 289 aaKnown RBP12.15□□□□□ -0.46
GARNL3-204ENST00000429629 DPM3Q9P2X0 92 aa12.15□□□□□ -0.46
GARNL3-204ENST00000429629 RABL2AQ9UBK7 228 aaPredicted RBP12.15□□□□□ -0.46
GARNL3-204ENST00000429629 RABL2BQ9UNT1 228 aa12.15□□□□□ -0.46
GARNL3-204ENST00000429629 PSG11Q9UQ72 335 aa12.15□□□□□ -0.46
GARNL3-204ENST00000429629 IGHV3OR16-10A0A075B7F0 116 aa12.14□□□□□ -0.47
GARNL3-204ENST00000429629 A0A0U1RQK1 487 aa12.14□□□□□ -0.47
GARNL3-204ENST00000429629 VGLL3A8MV65 326 aa12.14□□□□□ -0.47
GARNL3-204ENST00000429629 J3QR06 171 aa12.14□□□□□ -0.47
GARNL3-204ENST00000429629 SDCBPO00560 298 aaPredicted RBP12.14□□□□□ -0.47
GARNL3-204ENST00000429629 TCF21O43680 179 aa12.14□□□□□ -0.47
GARNL3-204ENST00000429629 RGS11O94810 467 aa12.14□□□□□ -0.47
GARNL3-204ENST00000429629 ARG1P05089 322 aa12.14□□□□□ -0.47
GARNL3-204ENST00000429629 COX7A1P24310 79 aa12.14□□□□□ -0.47
GARNL3-204ENST00000429629 NFYBP25208 207 aa12.14□□□□□ -0.47
GARNL3-204ENST00000429629 HTR1DP28221 377 aa12.14□□□□□ -0.47
GARNL3-204ENST00000429629 CEACAM3P40198 252 aa12.14□□□□□ -0.47
GARNL3-204ENST00000429629 CBX5P45973 191 aa12.14□□□□□ -0.47
GARNL3-204ENST00000429629 DYNLT3P51808 116 aa12.14□□□□□ -0.47
GARNL3-204ENST00000429629 DLX1P56177 255 aa12.14□□□□□ -0.47
GARNL3-204ENST00000429629 HLA-DRB5Q30154 266 aa12.14□□□□□ -0.47
GARNL3-204ENST00000429629 DEFB112Q30KQ8 113 aa12.14□□□□□ -0.47
GARNL3-204ENST00000429629 RUSC1-AS1Q66K80 236 aa12.14□□□□□ -0.47
GARNL3-204ENST00000429629 OLFML2AQ68BL7 652 aa12.14□□□□□ -0.47
GARNL3-204ENST00000429629 PDZD9Q8IXQ8 264 aa12.14□□□□□ -0.47
GARNL3-204ENST00000429629 OR4P4Q8NGL7 312 aa12.14□□□□□ -0.47
GARNL3-204ENST00000429629 OR4A4PQ8NGN8 299 aa12.14□□□□□ -0.47
GARNL3-204ENST00000429629 FAM216AQ8WUB2 273 aa12.14□□□□□ -0.47
GARNL3-204ENST00000429629 ZFAND2BQ8WV99 257 aa12.14□□□□□ -0.47
GARNL3-204ENST00000429629 ZNF48Q96MX3 618 aaPredicted RBP12.14□□□□□ -0.47
GARNL3-204ENST00000429629 SLC6A7Q99884 636 aa12.14□□□□□ -0.47
GARNL3-204ENST00000429629 HDHD3Q9BSH5 251 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms