RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 C2orf68Q2NKX9 166 aa7.91□□□□□ -1.14
HMGCLL1-206ENST00000428842 SMIM21Q3B7S5 101 aa7.91□□□□□ -1.14
HMGCLL1-206ENST00000428842 C1orf174Q8IYL3 243 aa7.91□□□□□ -1.14
HMGCLL1-206ENST00000428842 SPERTQ8NA61 448 aa7.91□□□□□ -1.14
HMGCLL1-206ENST00000428842 OR2AK2Q8NG84 335 aa7.91□□□□□ -1.14
HMGCLL1-206ENST00000428842 OR13A1Q8NGR1 328 aa7.91□□□□□ -1.14
HMGCLL1-206ENST00000428842 ASB13Q8WXK3 278 aa7.91□□□□□ -1.14
HMGCLL1-206ENST00000428842 H1FXQ92522 213 aaKnown RBP7.91□□□□□ -1.14
HMGCLL1-206ENST00000428842 CMSS1Q9BQ75 279 aaKnown RBP7.91□□□□□ -1.14
HMGCLL1-206ENST00000428842 RAB1BQ9H0U4 201 aa7.91□□□□□ -1.14
HMGCLL1-206ENST00000428842 MED9Q9NWA0 146 aa7.91□□□□□ -1.14
HMGCLL1-206ENST00000428842 IL36GQ9NZH8 169 aa7.91□□□□□ -1.14
HMGCLL1-206ENST00000428842 PPIAL4AQ9Y536 164 aa7.91□□□□□ -1.14
HMGCLL1-206ENST00000428842 CYSRT1A8MQ03 144 aa7.9□□□□□ -1.14
HMGCLL1-206ENST00000428842 BET1O15155 118 aa7.9□□□□□ -1.14
HMGCLL1-206ENST00000428842 B3GALNT1O75752 331 aa7.9□□□□□ -1.14
HMGCLL1-206ENST00000428842 CD55P08174 381 aa7.9□□□□□ -1.14
HMGCLL1-206ENST00000428842 CCL3L1P16619 93 aa7.9□□□□□ -1.14
HMGCLL1-206ENST00000428842 H2BFSP57053 126 aa7.9□□□□□ -1.14
HMGCLL1-206ENST00000428842 STUMQ69YW2 141 aa7.9□□□□□ -1.14
HMGCLL1-206ENST00000428842 CDH26Q8IXH8 852 aa7.9□□□□□ -1.14
HMGCLL1-206ENST00000428842 OR51S1Q8NGJ8 323 aa7.9□□□□□ -1.14
HMGCLL1-206ENST00000428842 LRRC20Q8TCA0 184 aa7.9□□□□□ -1.14
HMGCLL1-206ENST00000428842 PCNPQ8WW12 178 aaKnown RBP7.9□□□□□ -1.14
HMGCLL1-206ENST00000428842 C19orf12Q9NSK7 152 aa7.9□□□□□ -1.14
HMGCLL1-206ENST00000428842 FBXO9Q9UK97 447 aaPredicted RBP7.9□□□□□ -1.14
HMGCLL1-206ENST00000428842 IGKV1-6A0A0C4DH72 117 aa7.9□□□□□ -1.15
HMGCLL1-206ENST00000428842 CEACAM18A8MTB9 384 aa7.9□□□□□ -1.15
HMGCLL1-206ENST00000428842 DVL1O14640 695 aa7.9□□□□□ -1.15
HMGCLL1-206ENST00000428842 SH2D1BO14796 132 aa7.9□□□□□ -1.15
HMGCLL1-206ENST00000428842 FCGR3AP08637 254 aa7.9□□□□□ -1.15
HMGCLL1-206ENST00000428842 S100A11P31949 105 aa7.9□□□□□ -1.15
HMGCLL1-206ENST00000428842 PPOXP50336 477 aa7.9□□□□□ -1.15
HMGCLL1-206ENST00000428842 ACTBP60709 375 aa7.9□□□□□ -1.15
HMGCLL1-206ENST00000428842 ACTG1P63261 375 aa7.9□□□□□ -1.15
HMGCLL1-206ENST00000428842 GNMTQ14749 295 aa7.9□□□□□ -1.15
HMGCLL1-206ENST00000428842 HERPUD1Q15011 391 aa7.9□□□□□ -1.15
HMGCLL1-206ENST00000428842 TESK1Q15569 626 aa7.9□□□□□ -1.15
HMGCLL1-206ENST00000428842 STEAP1BQ6NZ63 245 aa7.9□□□□□ -1.15
HMGCLL1-206ENST00000428842 SSX8Q7RTT4 187 aa7.9□□□□□ -1.15
HMGCLL1-206ENST00000428842 TCF23Q7RTU1 214 aa7.9□□□□□ -1.15
HMGCLL1-206ENST00000428842 MUC20Q8N307 709 aaPredicted RBP7.9□□□□□ -1.15
HMGCLL1-206ENST00000428842 TMEM229BQ8NBD8 167 aa7.9□□□□□ -1.15
HMGCLL1-206ENST00000428842 Q8NFD4 153 aa7.9□□□□□ -1.15
HMGCLL1-206ENST00000428842 REG4Q9BYZ8 158 aa7.9□□□□□ -1.15
HMGCLL1-206ENST00000428842 SCPEP1Q9HB40 452 aa7.9□□□□□ -1.15
HMGCLL1-206ENST00000428842 MYOZ1Q9NP98 299 aaPredicted RBP7.9□□□□□ -1.15
HMGCLL1-206ENST00000428842 OR1A1Q9P1Q5 309 aa7.9□□□□□ -1.15
HMGCLL1-206ENST00000428842 A0A0A6YYH2 397 aa7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 A6NJ64 397 aa7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 F12P00748 615 aaPredicted RBP7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 LPLP06858 475 aa7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 ADH4P08319 380 aa7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 GLP1RP43220 463 aa7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 TAS2R19P59542 299 aa7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 ZNF273Q14593 569 aa7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 SCGB2B2Q4G0G5 96 aa7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 TMEM65Q6PI78 240 aa7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 TMUB2Q71RG4 321 aa7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 LDLRAD3Q86YD5 345 aa7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 SAXO1Q8IYX7 474 aa7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 OR10V1Q8NGI7 309 aa7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 OR11L1Q8NGX0 322 aa7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 OR1L1Q8NH94 360 aa7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 MRPL30Q8TCC3 161 aaKnown RBP7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 PTX4Q96A99 478 aa7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 CPNE2Q96FN4 548 aaPredicted RBP7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 KIRREL1Q96J84 757 aa7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 GHRLQ9UBU3 117 aa7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 ZNF107Q9UII5 783 aaPredicted RBP7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 JMJD1CQ15652 2540 aa7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 LOC105371267A0A1B0GV96 52 aa7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 H3BUI4 141 aa7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 PLXNB1O43157 2135 aa7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 SIX6O95475 246 aa7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 TK1P04183 234 aa7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 RLN1P04808 185 aa7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 ZFP36P26651 326 aaKnown RBP7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 LCN2P80188 198 aa7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 KRBOX4Q5JUW0 171 aa7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 RBPMSQ93062 196 aaKnown RBP7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 MRGPRFQ96AM1 343 aa7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 SLC6A7Q99884 636 aa7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 PRR13Q9NZ81 148 aa7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 RCC2Q9P258 522 aaKnown RBP7.89□□□□□ -1.15
HMGCLL1-206ENST00000428842 IGHV4-61A0A0C4DH41 118 aa7.88□□□□□ -1.15
HMGCLL1-206ENST00000428842 A0A1W2PRD5 423 aa7.88□□□□□ -1.15
HMGCLL1-206ENST00000428842 A0A1W2PRF3 423 aa7.88□□□□□ -1.15
HMGCLL1-206ENST00000428842 A0A1W2PRM7 423 aa7.88□□□□□ -1.15
HMGCLL1-206ENST00000428842 LRRC30A6NM36 301 aa7.88□□□□□ -1.15
HMGCLL1-206ENST00000428842 GOSR2O14653 212 aa7.88□□□□□ -1.15
HMGCLL1-206ENST00000428842 CD74P04233 296 aa7.88□□□□□ -1.15
HMGCLL1-206ENST00000428842 ZNF735P0CB33 412 aa7.88□□□□□ -1.15
HMGCLL1-206ENST00000428842 DCAF12L2Q5VW00 463 aa7.88□□□□□ -1.15
HMGCLL1-206ENST00000428842 Q8TCH9 128 aa7.88□□□□□ -1.15
HMGCLL1-206ENST00000428842 SLC25A21Q9BQT8 299 aaPredicted RBP7.88□□□□□ -1.15
HMGCLL1-206ENST00000428842 IFT46Q9NQC8 304 aa7.88□□□□□ -1.15
HMGCLL1-206ENST00000428842 MMP26Q9NRE1 261 aa7.88□□□□□ -1.15
HMGCLL1-206ENST00000428842 TRAPPC2LQ9UL33 140 aa7.88□□□□□ -1.15
HMGCLL1-206ENST00000428842 NOP16Q9Y3C1 178 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms