RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 LRP11Q86VZ4 500 aa11.79□□□□□ -0.52
APOBEC3D-202ENST00000427494 DMBX1Q8NFW5 382 aa11.79□□□□□ -0.52
APOBEC3D-202ENST00000427494 MARC2Q969Z3 335 aa11.79□□□□□ -0.52
APOBEC3D-202ENST00000427494 MUCL1Q96DR8 90 aa11.79□□□□□ -0.52
APOBEC3D-202ENST00000427494 DUSP13Q9UII6 198 aa11.79□□□□□ -0.52
APOBEC3D-202ENST00000427494 KCNS2Q9ULS6 477 aa11.79□□□□□ -0.52
APOBEC3D-202ENST00000427494 TP53TG5Q9Y2B4 290 aa11.79□□□□□ -0.52
APOBEC3D-202ENST00000427494 RBM7Q9Y580 266 aaKnown RBP11.79□□□□□ -0.52
APOBEC3D-202ENST00000427494 ZNF705EA8MWA4 302 aaPredicted RBP11.79□□□□□ -0.52
APOBEC3D-202ENST00000427494 PROB1E7EW31 1015 aa11.79□□□□□ -0.52
APOBEC3D-202ENST00000427494 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.79□□□□□ -0.52
APOBEC3D-202ENST00000427494 JTBO76095 146 aa11.79□□□□□ -0.52
APOBEC3D-202ENST00000427494 FAM157CP0CG43 387 aa11.79□□□□□ -0.52
APOBEC3D-202ENST00000427494 CEACAM8P31997 349 aaPredicted RBP11.79□□□□□ -0.52
APOBEC3D-202ENST00000427494 MSMPQ1L6U9 139 aa11.79□□□□□ -0.52
APOBEC3D-202ENST00000427494 SMIM21Q3B7S5 101 aa11.79□□□□□ -0.52
APOBEC3D-202ENST00000427494 GPR157Q5UAW9 335 aa11.79□□□□□ -0.52
APOBEC3D-202ENST00000427494 IL22RA2Q969J5 263 aa11.79□□□□□ -0.52
APOBEC3D-202ENST00000427494 KCNIP1Q9NZI2 227 aa11.79□□□□□ -0.52
APOBEC3D-202ENST00000427494 A0A1B0GWJ7 208 aa11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 C1QTNF9BB2RNN3 333 aa11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 PTBP3O95758 552 aaKnown RBP11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 CRYAAP02489 173 aa11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 VDAC1P21796 283 aa11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 CEACAM6P40199 344 aa11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 NMSQ5H8A3 153 aa11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 SLC35E4Q6ICL7 350 aa11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 STPG2Q8N412 459 aa11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 SUN5Q8TC36 379 aa11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 LRRC29Q8WV35 223 aa11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 LPAR3Q9UBY5 353 aa11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 PPP1R3CQ9UQK1 317 aa11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 SPEF1Q9Y4P9 236 aa11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 GVINP1Q7Z2Y8 2422 aa11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 CEP250Q9BV73 2442 aa11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 ZSCAN5BA6NJL1 495 aa11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 FBXO24O75426 580 aa11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 IGLV2-14P01704 120 aa11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 SERPINE2P07093 398 aa11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 HOXD4P09016 255 aaPredicted RBP11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 PSG2P11465 335 aa11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 POLR2GP62487 172 aaKnown RBP eCLIP11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 COL10A1Q03692 680 aa11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 AESQ08117 197 aa11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 C3orf36Q3SXR2 165 aa11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 BPIFCQ8NFQ6 507 aa11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 OR1L1Q8NH94 360 aa11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 PRR7Q8TB68 274 aa11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 ARL11Q969Q4 196 aa11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 COL25A1Q9BXS0 654 aaPredicted RBP11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 PARP12Q9H0J9 701 aaKnown RBP11.78□□□□□ -0.52
APOBEC3D-202ENST00000427494 RAB19A4D1S5 217 aa11.77□□□□□ -0.53
APOBEC3D-202ENST00000427494 CLEC18AA5D8T8 446 aa11.77□□□□□ -0.53
APOBEC3D-202ENST00000427494 SSSCA1O60232 199 aa11.77□□□□□ -0.53
APOBEC3D-202ENST00000427494 HEXAP06865 529 aa11.77□□□□□ -0.53
APOBEC3D-202ENST00000427494 OR8U9P0C7N5 309 aa11.77□□□□□ -0.53
APOBEC3D-202ENST00000427494 PVALBP20472 110 aaPredicted RBP11.77□□□□□ -0.53
APOBEC3D-202ENST00000427494 BMP5P22003 454 aa11.77□□□□□ -0.53
APOBEC3D-202ENST00000427494 OR3A1P47881 315 aa11.77□□□□□ -0.53
APOBEC3D-202ENST00000427494 VHLLQ6RSH7 139 aa11.77□□□□□ -0.53
APOBEC3D-202ENST00000427494 SPACA3Q8IXA5 215 aa11.77□□□□□ -0.53
APOBEC3D-202ENST00000427494 UBAC2Q8NBM4 344 aa11.77□□□□□ -0.53
APOBEC3D-202ENST00000427494 CLEC18CQ8NCF0 446 aa11.77□□□□□ -0.53
APOBEC3D-202ENST00000427494 OR8U1Q8NH10 309 aa11.77□□□□□ -0.53
APOBEC3D-202ENST00000427494 NARS2Q96I59 477 aaKnown RBP11.77□□□□□ -0.53
APOBEC3D-202ENST00000427494 ABHD14BQ96IU4 210 aa11.77□□□□□ -0.53
APOBEC3D-202ENST00000427494 AKR1E2Q96JD6 320 aa11.77□□□□□ -0.53
APOBEC3D-202ENST00000427494 MAGT1Q9H0U3 335 aa11.77□□□□□ -0.53
APOBEC3D-202ENST00000427494 C11orf1Q9H5F2 150 aa11.77□□□□□ -0.53
APOBEC3D-202ENST00000427494 WFDC1Q9HC57 220 aa11.77□□□□□ -0.53
APOBEC3D-202ENST00000427494 COQ3Q9NZJ6 369 aa11.77□□□□□ -0.53
APOBEC3D-202ENST00000427494 METRNQ9UJH8 293 aa11.77□□□□□ -0.53
APOBEC3D-202ENST00000427494 CHD3Q12873 2000 aaKnown RBP11.77□□□□□ -0.53
APOBEC3D-202ENST00000427494 BORCS7-ASMTA0A0B4J1R7 106 aa11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 C12orf77C9JDV5 145 aa11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 MED6O75586 246 aa11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 NXPH3O95157 252 aa11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 CD200P41217 278 aa11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 GABRA2P47869 451 aa11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 KLF3P57682 345 aaPredicted RBP11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 CXorf66Q5JRM2 361 aaPredicted RBP11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 UQCC3Q6UW78 93 aa11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 COQ2Q96H96 371 aa11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 SCNM1Q9BWG6 230 aa11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 OOEPA6NGQ2 149 aa11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 IFNL4K9M1U5 179 aa11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 IGHV3-13P01766 116 aa11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 WNT2P09544 360 aa11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 ZNF16P17020 682 aaPredicted RBP11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 EGR1P18146 543 aa11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 EPHA1P21709 976 aa11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 IL2RGP31785 369 aa11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 SULT1A2P50226 295 aa11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 TDGF1P3P51864 188 aa11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 VAMP2P63027 116 aa11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 EWSR1Q01844 656 aaKnown RBP eCLIP11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 NHLH2Q02577 135 aa11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 FAM27E3Q08E93 113 aa11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 MST1LQ2TV78 715 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms