RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 CFHR2P36980 270 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 MPV17P39210 176 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 CD151P48509 253 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 HSPA13P48723 471 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 ZNF140P52738 457 aaPredicted RBP1.31□□□□□ -2.2
PTPRC-208ENST00000427110 TAS2R39P59534 338 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 PPP1CAP62136 330 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 PRKCDQ05655 676 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 STX5Q13190 355 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 BTN1A1Q13410 526 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 MED21Q13503 144 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 IHHQ14623 411 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 LIN52Q52LA3 116 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 LUZP6Q538Z0 58 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 CLLU1OSQ5K130 101 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 ZNF678Q5SXM1 525 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 LCN8Q6JVE9 175 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 UGT2A3Q6UWM9 527 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 IZUMO2Q6UXV1 221 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 CYHR1Q6ZMK1 362 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 SLC35D2Q76EJ3 337 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 PDPNQ86YL7 162 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 FUNDC1Q8IVP5 155 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 DEFB107AQ8IZN7 70 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 ORMDL3Q8N138 153 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 STK40Q8N2I9 435 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 ATPAF2Q8N5M1 289 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 PACRGLQ8N7B6 248 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 ZNF321PQ8N8H1 164 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 SLC25A29Q8N8R3 303 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 CYB561A3Q8NBI2 242 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 OR52E4Q8NGH9 312 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 OR5M1Q8NGP8 315 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 OR6K6Q8NGW6 343 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 OR1P1Q8NH06 330 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 SFXN5Q8TD22 340 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 DDI1Q8WTU0 396 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 PHF10Q8WUB8 498 aaKnown RBP1.31□□□□□ -2.2
PTPRC-208ENST00000427110 TMEM234Q8WY98 164 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 HGDQ93099 445 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 UBE2E2Q96LR5 201 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 C18orf15Q96N68 181 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 TRIB3Q96RU7 358 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 HOPXQ9BPY8 73 aaPredicted RBP1.31□□□□□ -2.2
PTPRC-208ENST00000427110 TBL1XR1Q9BZK7 514 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 ARV1Q9H2C2 271 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 MFSD1Q9H3U5 465 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 WDR55Q9H6Y2 383 aaPredicted RBP1.31□□□□□ -2.2
PTPRC-208ENST00000427110 PRSS16Q9NQE7 514 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 C8orf4Q9NR00 106 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 HEBP1Q9NRV9 189 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 ARMC1Q9NVT9 282 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 DHCR7Q9UBM7 475 aaKnown RBP1.31□□□□□ -2.2
PTPRC-208ENST00000427110 PEF1Q9UBV8 284 aaKnown RBP1.31□□□□□ -2.2
PTPRC-208ENST00000427110 CD300AQ9UGN4 299 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 STOML2Q9UJZ1 356 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 GINS2Q9Y248 185 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 SIGLEC7Q9Y286 467 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 NDUFAF1Q9Y375 327 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 WIF1Q9Y5W5 379 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 KPTNQ9Y664 436 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 TET2Q6N021 2002 aaPredicted RBP1.31□□□□□ -2.2
PTPRC-208ENST00000427110 MDC1Q14676 2089 aaKnown RBP1.31□□□□□ -2.2
PTPRC-208ENST00000427110 SRCAPQ6ZRS2 3230 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 NUMA1Q14980 2115 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 CENPFP49454 3210 aa1.3□□□□□ -2.2
PTPRC-208ENST00000427110 TRPM6Q9BX84 2022 aa1.3□□□□□ -2.2
PTPRC-208ENST00000427110 DOCK9Q9BZ29 2069 aa1.3□□□□□ -2.2
PTPRC-208ENST00000427110 MUC22E2RYF6 1773 aaPredicted RBP1.3□□□□□ -2.2
PTPRC-208ENST00000427110 IGHV3OR16-8A0A075B7F1 116 aa1.3□□□□□ -2.2
PTPRC-208ENST00000427110 LOC102724200A0A096LPH7 203 aaPredicted RBP1.3□□□□□ -2.2
PTPRC-208ENST00000427110 TRAV8-6A0A0B4J262 113 aa1.3□□□□□ -2.2
PTPRC-208ENST00000427110 A0A0B4J2E0 115 aa1.3□□□□□ -2.2
PTPRC-208ENST00000427110 A0A0G2JMP0 313 aa1.3□□□□□ -2.2
PTPRC-208ENST00000427110 A0A0J9YYE9 177 aa1.3□□□□□ -2.2
PTPRC-208ENST00000427110 A0A0X1KG70 313 aa1.3□□□□□ -2.2
PTPRC-208ENST00000427110 PRORSD1PA6NEY8 169 aa1.3□□□□□ -2.2
PTPRC-208ENST00000427110 F5H5T6 163 aa1.3□□□□□ -2.2
PTPRC-208ENST00000427110 LINC01619G3V211 115 aa1.3□□□□□ -2.2
PTPRC-208ENST00000427110 ZNF701M0R085 212 aaPredicted RBP1.3□□□□□ -2.2
PTPRC-208ENST00000427110 FXYD1O00168 92 aa1.3□□□□□ -2.2
PTPRC-208ENST00000427110 PSMD12O00232 456 aaPredicted RBP1.3□□□□□ -2.2
PTPRC-208ENST00000427110 UBFD1O14562 309 aaKnown RBP1.3□□□□□ -2.2
PTPRC-208ENST00000427110 MRASO14807 208 aa1.3□□□□□ -2.2
PTPRC-208ENST00000427110 AZIN1O14977 448 aa1.3□□□□□ -2.2
PTPRC-208ENST00000427110 PFDN6O15212 129 aa1.3□□□□□ -2.2
PTPRC-208ENST00000427110 OR7C2O60412 319 aa1.3□□□□□ -2.2
PTPRC-208ENST00000427110 SMIM24O75264 130 aa1.3□□□□□ -2.2
PTPRC-208ENST00000427110 ZMPSTE24O75844 475 aa1.3□□□□□ -2.2
PTPRC-208ENST00000427110 CDK14O94921 469 aa1.3□□□□□ -2.2
PTPRC-208ENST00000427110 TNFAIP8O95379 198 aa1.3□□□□□ -2.2
PTPRC-208ENST00000427110 IGLV2-8P01709 118 aa1.3□□□□□ -2.2
PTPRC-208ENST00000427110 IGKV4-1P06312 121 aa1.3□□□□□ -2.2
PTPRC-208ENST00000427110 RPS17P08708 135 aaKnown RBP1.3□□□□□ -2.2
PTPRC-208ENST00000427110 MMP7P09237 267 aaPredicted RBP1.3□□□□□ -2.2
PTPRC-208ENST00000427110 OR4Q2P0C623 313 aa1.3□□□□□ -2.2
PTPRC-208ENST00000427110 IDO1P14902 403 aa1.3□□□□□ -2.2
PTPRC-208ENST00000427110 HMGA1P17096 107 aaKnown RBP1.3□□□□□ -2.2
PTPRC-208ENST00000427110 PRKACAP17612 351 aa1.3□□□□□ -2.2
PTPRC-208ENST00000427110 NTF3P20783 257 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms