RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 CDC20BQ86Y33 519 aa13.84□□□□□ -0.19
PKP4-205ENST00000426248 ZNF524Q96C55 264 aa13.84□□□□□ -0.19
PKP4-205ENST00000426248 ARHGAP5-AS1Q96IT6 56 aa13.84□□□□□ -0.19
PKP4-205ENST00000426248 CIB3Q96Q77 187 aaPredicted RBP13.84□□□□□ -0.19
PKP4-205ENST00000426248 RPH3ALQ9UNE2 315 aa13.84□□□□□ -0.19
PKP4-205ENST00000426248 OPN1MWP04001 364 aa13.84□□□□□ -0.19
PKP4-205ENST00000426248 OR5AC1P0C628 307 aa13.84□□□□□ -0.19
PKP4-205ENST00000426248 OPN1MW2P0DN77 364 aa13.84□□□□□ -0.19
PKP4-205ENST00000426248 OPN1MW3P0DN78 364 aa13.84□□□□□ -0.19
PKP4-205ENST00000426248 GABRR1P24046 479 aa13.84□□□□□ -0.19
PKP4-205ENST00000426248 HOXC12P31275 282 aa13.84□□□□□ -0.19
PKP4-205ENST00000426248 ZNF92Q03936 586 aa13.84□□□□□ -0.19
PKP4-205ENST00000426248 OTOSQ8NHW6 89 aa13.84□□□□□ -0.19
PKP4-205ENST00000426248 VN1R17PQ8TDU5 208 aa13.84□□□□□ -0.19
PKP4-205ENST00000426248 ARV1Q9H2C2 271 aa13.84□□□□□ -0.19
PKP4-205ENST00000426248 ZNF71Q9NQZ8 489 aaPredicted RBP13.84□□□□□ -0.19
PKP4-205ENST00000426248 CYB5R3P00387 301 aaPredicted RBP13.84□□□□□ -0.19
PKP4-205ENST00000426248 TMEM225BP0DP42 221 aa13.84□□□□□ -0.19
PKP4-205ENST00000426248 CSRP1P21291 193 aaKnown RBP13.84□□□□□ -0.19
PKP4-205ENST00000426248 OR10J1P30954 320 aa13.84□□□□□ -0.19
PKP4-205ENST00000426248 ENDOGQ14249 297 aaKnown RBP13.84□□□□□ -0.19
PKP4-205ENST00000426248 RSPO4Q2I0M5 234 aaPredicted RBP13.84□□□□□ -0.19
PKP4-205ENST00000426248 RNASE8Q8TDE3 154 aaKnown RBP13.84□□□□□ -0.19
PKP4-205ENST00000426248 EMG1Q92979 244 aaKnown RBP13.84□□□□□ -0.19
PKP4-205ENST00000426248 ZNF845Q96IR2 970 aaPredicted RBP13.84□□□□□ -0.19
PKP4-205ENST00000426248 OR2J1Q9GZK6 312 aa13.84□□□□□ -0.19
PKP4-205ENST00000426248 VAMP5O95183 116 aa13.83□□□□□ -0.19
PKP4-205ENST00000426248 SRP19P09132 144 aaKnown RBP13.83□□□□□ -0.19
PKP4-205ENST00000426248 SOX8P57073 446 aa13.83□□□□□ -0.19
PKP4-205ENST00000426248 DNM1P46Q6ZS02 220 aa13.83□□□□□ -0.19
PKP4-205ENST00000426248 PCGF1Q9BSM1 259 aa13.83□□□□□ -0.19
PKP4-205ENST00000426248 FER1L5A0AVI2 2057 aa13.83□□□□□ -0.2
PKP4-205ENST00000426248 A0A1W2PP11 408 aa13.83□□□□□ -0.2
PKP4-205ENST00000426248 GALR1P47211 349 aa13.83□□□□□ -0.2
PKP4-205ENST00000426248 HIST1H3AP68431 136 aa13.83□□□□□ -0.2
PKP4-205ENST00000426248 FDCSPQ8NFU4 85 aa13.83□□□□□ -0.2
PKP4-205ENST00000426248 AQP3Q92482 292 aa13.83□□□□□ -0.2
PKP4-205ENST00000426248 MRGPRFQ96AM1 343 aa13.83□□□□□ -0.2
PKP4-205ENST00000426248 BTF3L4Q96K17 158 aa13.83□□□□□ -0.2
PKP4-205ENST00000426248 TECTBQ96PL2 329 aa13.83□□□□□ -0.2
PKP4-205ENST00000426248 LRP12Q9Y561 859 aa13.83□□□□□ -0.2
PKP4-205ENST00000426248 A0A1W2PNU3 283 aaPredicted RBP13.83□□□□□ -0.2
PKP4-205ENST00000426248 HSD17B6O14756 317 aa13.83□□□□□ -0.2
PKP4-205ENST00000426248 SP1P08047 785 aa13.83□□□□□ -0.2
PKP4-205ENST00000426248 VSIG8P0DPA2 414 aa13.83□□□□□ -0.2
PKP4-205ENST00000426248 PIGPP57054 158 aa13.83□□□□□ -0.2
PKP4-205ENST00000426248 ABLIM2Q6H8Q1 611 aa13.83□□□□□ -0.2
PKP4-205ENST00000426248 TRGV5A0A0B4J1U4 118 aa13.83□□□□□ -0.2
PKP4-205ENST00000426248 PHF1O43189 567 aaPredicted RBP13.83□□□□□ -0.2
PKP4-205ENST00000426248 SSSCA1O60232 199 aa13.83□□□□□ -0.2
PKP4-205ENST00000426248 LINC00114Q6XXX2 140 aa13.83□□□□□ -0.2
PKP4-205ENST00000426248 ABHD12BQ7Z5M8 362 aaPredicted RBP13.83□□□□□ -0.2
PKP4-205ENST00000426248 OR5D14Q8NGL3 314 aa13.83□□□□□ -0.2
PKP4-205ENST00000426248 DYRK2Q92630 601 aa13.83□□□□□ -0.2
PKP4-205ENST00000426248 ABHD6Q9BV23 337 aa13.83□□□□□ -0.2
PKP4-205ENST00000426248 ACTR3CQ9C0K3 210 aaPredicted RBP13.83□□□□□ -0.2
PKP4-205ENST00000426248 WFDC1Q9HC57 220 aa13.83□□□□□ -0.2
PKP4-205ENST00000426248 HEATR1Q9H583 2144 aaKnown RBP13.82□□□□□ -0.2
PKP4-205ENST00000426248 H3BP45 60 aa13.82□□□□□ -0.2
PKP4-205ENST00000426248 TAS2R46P59540 309 aa13.82□□□□□ -0.2
PKP4-205ENST00000426248 ERASQ7Z444 233 aa13.82□□□□□ -0.2
PKP4-205ENST00000426248 OR1L6Q8NGR2 347 aa13.82□□□□□ -0.2
PKP4-205ENST00000426248 SLC5A6Q9Y289 635 aa13.82□□□□□ -0.2
PKP4-205ENST00000426248 WNK1Q9H4A3 2382 aa13.82□□□□□ -0.2
PKP4-205ENST00000426248 IFNA5P01569 189 aa13.82□□□□□ -0.2
PKP4-205ENST00000426248 LCATP04180 440 aa13.82□□□□□ -0.2
PKP4-205ENST00000426248 NKAIN3Q8N8D7 197 aa13.82□□□□□ -0.2
PKP4-205ENST00000426248 OR13G1Q8NGZ3 307 aa13.82□□□□□ -0.2
PKP4-205ENST00000426248 A0A096LPE4 126 aa13.82□□□□□ -0.2
PKP4-205ENST00000426248 TRAV17A0A0B4J275 112 aa13.82□□□□□ -0.2
PKP4-205ENST00000426248 A0A1W2PPZ6 126 aa13.82□□□□□ -0.2
PKP4-205ENST00000426248 HBE1P02100 147 aa13.82□□□□□ -0.2
PKP4-205ENST00000426248 CELA3AP09093 270 aa13.82□□□□□ -0.2
PKP4-205ENST00000426248 THBS4P35443 961 aa13.82□□□□□ -0.2
PKP4-205ENST00000426248 LYZL2Q7Z4W2 148 aa13.82□□□□□ -0.2
PKP4-205ENST00000426248 GCNT2Q8N0V5 402 aa13.82□□□□□ -0.2
PKP4-205ENST00000426248 ABHD3Q8WU67 409 aa13.82□□□□□ -0.2
PKP4-205ENST00000426248 C11orf40Q8WZ69 217 aa13.82□□□□□ -0.2
PKP4-205ENST00000426248 SCNM1Q9BWG6 230 aa13.82□□□□□ -0.2
PKP4-205ENST00000426248 HMGB3O15347 200 aaKnown RBP13.81□□□□□ -0.2
PKP4-205ENST00000426248 KRTDAPP60985 99 aa13.81□□□□□ -0.2
PKP4-205ENST00000426248 MRPS11P82912 194 aaKnown RBP13.81□□□□□ -0.2
PKP4-205ENST00000426248 ZNF573Q86YE8 665 aa13.81□□□□□ -0.2
PKP4-205ENST00000426248 SCGB1C1Q8TD33 95 aa13.81□□□□□ -0.2
PKP4-205ENST00000426248 ZNF385AQ96PM9 386 aaKnown RBP13.81□□□□□ -0.2
PKP4-205ENST00000426248 TTTY12Q9BZ98 90 aa13.81□□□□□ -0.2
PKP4-205ENST00000426248 KIAA1456Q9P272 454 aa13.81□□□□□ -0.2
PKP4-205ENST00000426248 FIGNL2A6NMB9 653 aa13.81□□□□□ -0.2
PKP4-205ENST00000426248 ZNHIT1O43257 154 aa13.81□□□□□ -0.2
PKP4-205ENST00000426248 CCKARP32238 428 aa13.81□□□□□ -0.2
PKP4-205ENST00000426248 TMEM183BQ1AE95 376 aa13.81□□□□□ -0.2
PKP4-205ENST00000426248 TMEM251Q8N6I4 163 aa13.81□□□□□ -0.2
PKP4-205ENST00000426248 OR5C1Q8NGR4 320 aa13.81□□□□□ -0.2
PKP4-205ENST00000426248 ZNF107Q9UII5 783 aaPredicted RBP13.81□□□□□ -0.2
PKP4-205ENST00000426248 DXOO77932 396 aaKnown RBP13.81□□□□□ -0.2
PKP4-205ENST00000426248 FREM3P0C091 2139 aa13.81□□□□□ -0.2
PKP4-205ENST00000426248 OPRM1P35372 400 aa13.81□□□□□ -0.2
PKP4-205ENST00000426248 RPS4XP62701 263 aaKnown RBP13.81□□□□□ -0.2
PKP4-205ENST00000426248 PLP2Q04941 152 aa13.81□□□□□ -0.2
PKP4-205ENST00000426248 ZNF787Q6DD87 383 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms