RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 HERPUD1Q15011 391 aa9.1□□□□□ -0.95
CUX1-205ENST00000425244 TMEM182Q6ZP80 229 aaPredicted RBP9.1□□□□□ -0.95
CUX1-205ENST00000425244 WDYHV1Q96HA8 205 aa9.1□□□□□ -0.95
CUX1-205ENST00000425244 CCL28Q9NRJ3 127 aa9.1□□□□□ -0.95
CUX1-205ENST00000425244 POMT1Q9Y6A1 747 aa9.1□□□□□ -0.95
CUX1-205ENST00000425244 NBASA2RRP1 2371 aa9.1□□□□□ -0.95
CUX1-205ENST00000425244 IGHV3-64DA0A0J9YX35 117 aa9.1□□□□□ -0.95
CUX1-205ENST00000425244 TRDCB7Z8K6 153 aa9.1□□□□□ -0.95
CUX1-205ENST00000425244 NKX2-1P43699 371 aaPredicted RBP9.1□□□□□ -0.95
CUX1-205ENST00000425244 SPCS3P61009 180 aa9.1□□□□□ -0.95
CUX1-205ENST00000425244 EWSR1Q01844 656 aaKnown RBP eCLIP9.1□□□□□ -0.952e-6■■■□□ 16.3
CUX1-205ENST00000425244 TBR1Q16650 682 aa9.1□□□□□ -0.95
CUX1-205ENST00000425244 P4HA3Q7Z4N8 544 aa9.1□□□□□ -0.95
CUX1-205ENST00000425244 MED12LQ86YW9 2145 aa9.1□□□□□ -0.95
CUX1-205ENST00000425244 ZFP82Q8N141 532 aa9.1□□□□□ -0.95
CUX1-205ENST00000425244 OR4D5Q8NGN0 318 aa9.1□□□□□ -0.95
CUX1-205ENST00000425244 FAM213BQ8TBF2 198 aa9.1□□□□□ -0.95
CUX1-205ENST00000425244 POM121L2Q96KW2 1035 aa9.1□□□□□ -0.95
CUX1-205ENST00000425244 TRIB1Q96RU8 372 aa9.1□□□□□ -0.95
CUX1-205ENST00000425244 RFNGQ9Y644 331 aa9.1□□□□□ -0.95
CUX1-205ENST00000425244 SLC22A20A6NK97 555 aa9.09□□□□□ -0.95
CUX1-205ENST00000425244 ANKRD30BLA7E2S9 258 aa9.09□□□□□ -0.95
CUX1-205ENST00000425244 NAPSAO96009 420 aa9.09□□□□□ -0.95
CUX1-205ENST00000425244 DANCRP0C864 163 aa9.09□□□□□ -0.95
CUX1-205ENST00000425244 APLNRP35414 380 aa9.09□□□□□ -0.95
CUX1-205ENST00000425244 KCNJ3P48549 501 aa9.09□□□□□ -0.95
CUX1-205ENST00000425244 SRPXP78539 464 aa9.09□□□□□ -0.95
CUX1-205ENST00000425244 PEA15Q15121 130 aa9.09□□□□□ -0.95
CUX1-205ENST00000425244 CXorf66Q5JRM2 361 aaPredicted RBP9.09□□□□□ -0.95
CUX1-205ENST00000425244 OR2T2Q6IF00 324 aa9.09□□□□□ -0.95
CUX1-205ENST00000425244 SUMF2Q8NBJ7 301 aa9.09□□□□□ -0.95
CUX1-205ENST00000425244 IL1F10Q8WWZ1 152 aa9.09□□□□□ -0.95
CUX1-205ENST00000425244 C19orf12Q9NSK7 152 aa9.09□□□□□ -0.95
CUX1-205ENST00000425244 CACNA1AO00555 2505 aa9.09□□□□□ -0.95
CUX1-205ENST00000425244 TRAV39A0A0B4J263 110 aa9.09□□□□□ -0.95
CUX1-205ENST00000425244 IGKV1-6A0A0C4DH72 117 aa9.09□□□□□ -0.95
CUX1-205ENST00000425244 SEC11BP0C7V7 166 aa9.09□□□□□ -0.95
CUX1-205ENST00000425244 CA6P23280 308 aa9.09□□□□□ -0.95
CUX1-205ENST00000425244 ARR3P36575 388 aa9.09□□□□□ -0.95
CUX1-205ENST00000425244 VAMP2P63027 116 aa9.09□□□□□ -0.95
CUX1-205ENST00000425244 GUK1Q16774 197 aa9.09□□□□□ -0.95
CUX1-205ENST00000425244 RBMS3Q6XE24 437 aaKnown RBP9.09□□□□□ -0.95
CUX1-205ENST00000425244 SELENOHQ8IZQ5 122 aaKnown RBP9.09□□□□□ -0.95
CUX1-205ENST00000425244 FAM185AQ8N0U4 392 aa9.09□□□□□ -0.95
CUX1-205ENST00000425244 OR2C3Q8N628 320 aa9.09□□□□□ -0.95
CUX1-205ENST00000425244 TMEM217Q8N7C4 229 aa9.09□□□□□ -0.95
CUX1-205ENST00000425244 C2CD4CQ8TF44 421 aa9.09□□□□□ -0.95
CUX1-205ENST00000425244 BOD1Q96IK1 185 aa9.09□□□□□ -0.95
CUX1-205ENST00000425244 GINS3Q9BRX5 216 aa9.09□□□□□ -0.95
CUX1-205ENST00000425244 C20orf24Q9BUV8 137 aa9.09□□□□□ -0.95
CUX1-205ENST00000425244 KIR2DS1A0A191URI9 304 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 A0A1W2PR80 420 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 IGSF23A1L1A6 192 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 FAM90A10PA6NDY2 464 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 FAM90A18PA6NE21 464 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 FAM90A16PA6NEW6 464 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 FAM90A20PA6NIJ5 464 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 FAM90A8PA6NJQ4 464 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 FAM90A7PA6NKC0 464 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 FAM90A22PA8MWA6 464 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 FAM90A12PA8MX19 464 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 FAM90A5PA8MXJ8 464 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 FAM90A23PA8MXZ1 464 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 CST7O76096 145 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 FAM90A15PP0C7V4 464 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 FAM90A13PP0C7W8 464 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 FAM90A14PP0C7W9 464 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 FAM90A24PP0C7X0 464 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 SPP1P10451 314 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 COX5BP10606 129 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 EPHA1P21709 976 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 PMELP40967 661 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 WNT5AP41221 380 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 KIR2DS4P43632 304 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 TMPRSS3P57727 454 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 KIR2DS1Q14954 304 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 IGFL3Q6UXB1 125 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 C20orf204Q6ZNR8 217 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 Q6ZS92 163 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 PRR18Q8N4B5 295 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 RXFP4Q8TDU9 374 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 ARV1Q9H2C2 271 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 PLSCR2Q9NRY7 297 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 CACFD1Q9UGQ2 172 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 FBXO7Q9Y3I1 522 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 ZGRF1Q86YA3 2104 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 M0R036 132 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 RHBDL1O75783 438 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 CDS2O95674 445 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 CRYBA1P05813 215 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 ZNF44P15621 663 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 SNCAP37840 140 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 CASP6P55212 293 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 MPV17LQ2QL34 196 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 SAXO1Q8IYX7 474 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 CMTM1Q8IZ96 169 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 Q8NFD4 153 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 OR5A2Q8NGI9 324 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 OR51H1Q8NH63 302 aa9.08□□□□□ -0.96
CUX1-205ENST00000425244 UBALD1Q8TB05 177 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms