RNA–Protein interactions for RNA: ENST00000425049.1

SHANK2-207, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 4

Gene SHANK2, Length 557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-207ENST00000425049 RNLSQ5VYX0 342 aa13.2□□□□□ -0.3
SHANK2-207ENST00000425049 PRR18Q8N4B5 295 aa13.2□□□□□ -0.3
SHANK2-207ENST00000425049 OR4K15Q8NH41 348 aa13.2□□□□□ -0.3
SHANK2-207ENST00000425049 FAM46BQ96A09 425 aa13.2□□□□□ -0.3
SHANK2-207ENST00000425049 TSSC4Q9Y5U2 329 aaPredicted RBP13.2□□□□□ -0.3
SHANK2-207ENST00000425049 IGHV3-43A0A0B4J1X8 118 aa13.19□□□□□ -0.3
SHANK2-207ENST00000425049 FAM90A9PA6NNJ1 464 aa13.19□□□□□ -0.3
SHANK2-207ENST00000425049 PF4P02776 101 aa13.19□□□□□ -0.3
SHANK2-207ENST00000425049 AMY1AP04745 511 aa13.19□□□□□ -0.3
SHANK2-207ENST00000425049 AMY2AP04746 511 aa13.19□□□□□ -0.3
SHANK2-207ENST00000425049 UBBP0CG47 229 aa13.19□□□□□ -0.3
SHANK2-207ENST00000425049 IGHV3-43DP0DP04 118 aa13.19□□□□□ -0.3
SHANK2-207ENST00000425049 FUT3P21217 361 aa13.19□□□□□ -0.3
SHANK2-207ENST00000425049 REG1BP48304 166 aa13.19□□□□□ -0.3
SHANK2-207ENST00000425049 AQP4P55087 323 aa13.19□□□□□ -0.3
SHANK2-207ENST00000425049 CD83Q01151 205 aa13.19□□□□□ -0.3
SHANK2-207ENST00000425049 ZNF816Q0VGE8 651 aaPredicted RBP13.19□□□□□ -0.3
SHANK2-207ENST00000425049 DIAPH2-AS1Q14236 149 aa13.19□□□□□ -0.3
SHANK2-207ENST00000425049 SPHARQ15513 63 aa13.19□□□□□ -0.3
SHANK2-207ENST00000425049 SAMD5Q5TGI4 173 aa13.19□□□□□ -0.3
SHANK2-207ENST00000425049 GLT8D1Q68CQ7 371 aa13.19□□□□□ -0.3
SHANK2-207ENST00000425049 C8orf31Q8N9H6 132 aa13.19□□□□□ -0.3
SHANK2-207ENST00000425049 TMEM104Q8NE00 496 aa13.19□□□□□ -0.3
SHANK2-207ENST00000425049 Q96M66 194 aa13.19□□□□□ -0.3
SHANK2-207ENST00000425049 VCX3BQ9H321 246 aa13.19□□□□□ -0.3
SHANK2-207ENST00000425049 KCNIP1Q9NZI2 227 aa13.19□□□□□ -0.3
SHANK2-207ENST00000425049 TPRKBQ9Y3C4 175 aa13.19□□□□□ -0.3
SHANK2-207ENST00000425049 IGHV1-3A0A0C4DH29 117 aa13.18□□□□□ -0.3
SHANK2-207ENST00000425049 PSMB11A5LHX3 300 aa13.18□□□□□ -0.3
SHANK2-207ENST00000425049 ADARB2-AS1A8MUL3 147 aa13.18□□□□□ -0.3
SHANK2-207ENST00000425049 C12orf77C9JDV5 145 aa13.18□□□□□ -0.3
SHANK2-207ENST00000425049 H0YHG0 523 aa13.18□□□□□ -0.3
SHANK2-207ENST00000425049 FGF16O43320 207 aa13.18□□□□□ -0.3
SHANK2-207ENST00000425049 PDCD6O75340 191 aa13.18□□□□□ -0.3
SHANK2-207ENST00000425049 MPIG6BO95866 241 aa13.18□□□□□ -0.3
SHANK2-207ENST00000425049 GLAP06280 429 aa13.18□□□□□ -0.3
SHANK2-207ENST00000425049 CD33P20138 364 aa13.18□□□□□ -0.3
SHANK2-207ENST00000425049 BEAN1Q3B7T3 259 aa13.18□□□□□ -0.3
SHANK2-207ENST00000425049 Q3ZCU0 254 aa13.18□□□□□ -0.3
SHANK2-207ENST00000425049 HSD17B12Q53GQ0 312 aa13.18□□□□□ -0.3
SHANK2-207ENST00000425049 NKAPLQ5M9Q1 402 aa13.18□□□□□ -0.3
SHANK2-207ENST00000425049 LINC00311Q8N616 119 aa13.18□□□□□ -0.3
SHANK2-207ENST00000425049 C5orf56Q8N8D9 126 aa13.18□□□□□ -0.3
SHANK2-207ENST00000425049 PHYHIPQ92561 330 aa13.18□□□□□ -0.3
SHANK2-207ENST00000425049 UFD1Q92890 307 aa13.18□□□□□ -0.3
SHANK2-207ENST00000425049 NKX1-2Q9UD57 310 aaPredicted RBP13.18□□□□□ -0.3
SHANK2-207ENST00000425049 UBE2QL1A1L167 161 aa13.17□□□□□ -0.3
SHANK2-207ENST00000425049 NCBP2LA6PVI3 153 aaKnown RBP13.17□□□□□ -0.3
SHANK2-207ENST00000425049 SERPINE3A8MV23 424 aa13.17□□□□□ -0.3
SHANK2-207ENST00000425049 TXNL1O43396 289 aa13.17□□□□□ -0.3
SHANK2-207ENST00000425049 HBZP02008 142 aa13.17□□□□□ -0.3
SHANK2-207ENST00000425049 LOXL3P58215 753 aa13.17□□□□□ -0.3
SHANK2-207ENST00000425049 INSL4Q14641 139 aa13.17□□□□□ -0.3
SHANK2-207ENST00000425049 CEACAM19Q7Z692 300 aa13.17□□□□□ -0.3
SHANK2-207ENST00000425049 FOXRED2Q8IWF2 684 aa13.17□□□□□ -0.3
SHANK2-207ENST00000425049 OR10V1Q8NGI7 309 aa13.17□□□□□ -0.3
SHANK2-207ENST00000425049 NEDD4LQ96PU5 975 aa13.17□□□□□ -0.3
SHANK2-207ENST00000425049 IGHV3-72A0A0B4J1Y9 119 aa13.16□□□□□ -0.3
SHANK2-207ENST00000425049 HSMCR30P0CW71 290 aa13.16□□□□□ -0.3
SHANK2-207ENST00000425049 VHLP40337 213 aa13.16□□□□□ -0.3
SHANK2-207ENST00000425049 SLC35B1P78383 322 aa13.16□□□□□ -0.3
SHANK2-207ENST00000425049 FAM27D1Q5T7N8 215 aa13.16□□□□□ -0.3
SHANK2-207ENST00000425049 REC114Q7Z4M0 266 aa13.16□□□□□ -0.3
SHANK2-207ENST00000425049 SLC35E3Q7Z769 313 aa13.16□□□□□ -0.3
SHANK2-207ENST00000425049 TGIF2LXQ8IUE1 241 aa13.16□□□□□ -0.3
SHANK2-207ENST00000425049 IZUMO1Q8IYV9 350 aa13.16□□□□□ -0.3
SHANK2-207ENST00000425049 OR2T10Q8NGZ9 312 aa13.16□□□□□ -0.3
SHANK2-207ENST00000425049 OR1L1Q8NH94 360 aa13.16□□□□□ -0.3
SHANK2-207ENST00000425049 CHPT1Q8WUD6 406 aa13.16□□□□□ -0.3
SHANK2-207ENST00000425049 RTN4IP1Q8WWV3 396 aaPredicted RBP13.16□□□□□ -0.3
SHANK2-207ENST00000425049 SGCDQ92629 289 aa13.16□□□□□ -0.3
SHANK2-207ENST00000425049 TMEM59Q9BXS4 323 aa13.16□□□□□ -0.3
SHANK2-207ENST00000425049 OR2S2Q9NQN1 319 aa13.16□□□□□ -0.3
SHANK2-207ENST00000425049 RGS10O43665 173 aa13.15□□□□□ -0.3
SHANK2-207ENST00000425049 SC5DO75845 299 aa13.15□□□□□ -0.3
SHANK2-207ENST00000425049 RCC1P18754 421 aaPredicted RBP13.15□□□□□ -0.3
SHANK2-207ENST00000425049 OXLD1Q5BKU9 147 aa13.15□□□□□ -0.3
SHANK2-207ENST00000425049 TCTEX1D4Q5JR98 221 aa13.15□□□□□ -0.3
SHANK2-207ENST00000425049 KPRPQ5T749 579 aaPredicted RBP13.15□□□□□ -0.3
SHANK2-207ENST00000425049 LIPKQ5VXJ0 399 aa13.15□□□□□ -0.3
SHANK2-207ENST00000425049 UNQ9370/PRO34162Q6UXP9 181 aa13.15□□□□□ -0.3
SHANK2-207ENST00000425049 SLC25A48Q6ZT89 311 aaKnown RBP13.15□□□□□ -0.3
SHANK2-207ENST00000425049 ZNF554Q86TJ5 538 aa13.15□□□□□ -0.3
SHANK2-207ENST00000425049 LYPD6Q86Y78 171 aa13.15□□□□□ -0.3
SHANK2-207ENST00000425049 GAPTQ8N292 157 aa13.15□□□□□ -0.3
SHANK2-207ENST00000425049 EAF1Q96JC9 268 aaPredicted RBP13.15□□□□□ -0.3
SHANK2-207ENST00000425049 CCDC90BQ9GZT6 254 aa13.15□□□□□ -0.3
SHANK2-207ENST00000425049 TAF9BQ9HBM6 251 aa13.15□□□□□ -0.3
SHANK2-207ENST00000425049 LSM2Q9Y333 95 aaKnown RBP13.15□□□□□ -0.3
SHANK2-207ENST00000425049 PLXNB1O43157 2135 aa13.15□□□□□ -0.3
SHANK2-207ENST00000425049 NOTCH3Q9UM47 2321 aa13.14□□□□□ -0.31
SHANK2-207ENST00000425049 MOSP00540 346 aa13.14□□□□□ -0.31
SHANK2-207ENST00000425049 SRMP19623 302 aa13.14□□□□□ -0.31
SHANK2-207ENST00000425049 HTR2CP28335 458 aa13.14□□□□□ -0.31
SHANK2-207ENST00000425049 CD1BP29016 333 aa13.14□□□□□ -0.31
SHANK2-207ENST00000425049 SLC35A2P78381 396 aa13.14□□□□□ -0.31
SHANK2-207ENST00000425049 TRAM1Q15629 374 aa13.14□□□□□ -0.31
SHANK2-207ENST00000425049 SIGIRRQ6IA17 410 aa13.14□□□□□ -0.31
SHANK2-207ENST00000425049 C10orf99Q6UWK7 81 aa13.14□□□□□ -0.31
SHANK2-207ENST00000425049 ZNF329Q86UD4 541 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms