RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 VSIG8P0DPA2 414 aa10.35□□□□□ -0.75
VRK3-203ENST00000424804 CD24P25063 80 aa10.35□□□□□ -0.75
VRK3-203ENST00000424804 CLDN12P56749 244 aa10.35□□□□□ -0.75
VRK3-203ENST00000424804 RAB11BQ15907 218 aa10.35□□□□□ -0.75
VRK3-203ENST00000424804 ARSJQ5FYB0 599 aaPredicted RBP10.35□□□□□ -0.75
VRK3-203ENST00000424804 C1orf100Q5SVJ3 147 aa10.35□□□□□ -0.75
VRK3-203ENST00000424804 SYT6Q5T7P8 510 aaPredicted RBP10.35□□□□□ -0.75
VRK3-203ENST00000424804 HES5Q5TA89 166 aa10.35□□□□□ -0.75
VRK3-203ENST00000424804 REC114Q7Z4M0 266 aa10.35□□□□□ -0.75
VRK3-203ENST00000424804 SPARTQ8N0X7 666 aa10.35□□□□□ -0.75
VRK3-203ENST00000424804 OR6M1Q8NGM8 313 aa10.35□□□□□ -0.75
VRK3-203ENST00000424804 Q96M66 194 aa10.35□□□□□ -0.75
VRK3-203ENST00000424804 NEDD4LQ96PU5 975 aa10.35□□□□□ -0.75
VRK3-203ENST00000424804 NICN1Q9BSH3 213 aa10.35□□□□□ -0.75
VRK3-203ENST00000424804 DPM3Q9P2X0 92 aa10.35□□□□□ -0.75
VRK3-203ENST00000424804 PITPNC1Q9UKF7 332 aa10.35□□□□□ -0.75
VRK3-203ENST00000424804 NBEAL2Q6ZNJ1 2754 aa10.35□□□□□ -0.75
VRK3-203ENST00000424804 LEUTXA8MZ59 168 aa10.34□□□□□ -0.75
VRK3-203ENST00000424804 LY6LH3BQJ8 138 aa10.34□□□□□ -0.75
VRK3-203ENST00000424804 SDCBPO00560 298 aaPredicted RBP10.34□□□□□ -0.75
VRK3-203ENST00000424804 MRPS14O60783 128 aaKnown RBP10.34□□□□□ -0.75
VRK3-203ENST00000424804 PDCD6O75340 191 aa10.34□□□□□ -0.75
VRK3-203ENST00000424804 IGLV1-47P01700 117 aa10.34□□□□□ -0.75
VRK3-203ENST00000424804 MT-ND4P03905 459 aa10.34□□□□□ -0.75
VRK3-203ENST00000424804 ARSBP15848 533 aa10.34□□□□□ -0.75
VRK3-203ENST00000424804 FUT3P21217 361 aa10.34□□□□□ -0.75
VRK3-203ENST00000424804 MYL9P24844 172 aa10.34□□□□□ -0.75
VRK3-203ENST00000424804 LOXL3P58215 753 aa10.34□□□□□ -0.75
VRK3-203ENST00000424804 HLA-DRB5Q30154 266 aa10.34□□□□□ -0.75
VRK3-203ENST00000424804 FOXB2Q5VYV0 432 aa10.34□□□□□ -0.75
VRK3-203ENST00000424804 C10orf99Q6UWK7 81 aa10.34□□□□□ -0.75
VRK3-203ENST00000424804 ZNF497Q6ZNH5 498 aa10.34□□□□□ -0.75
VRK3-203ENST00000424804 OR9G1Q8NH87 305 aa10.34□□□□□ -0.75
VRK3-203ENST00000424804 KCNG3Q8TAE7 436 aa10.34□□□□□ -0.75
VRK3-203ENST00000424804 SETD6Q8TBK2 473 aa10.34□□□□□ -0.75
VRK3-203ENST00000424804 GFI1Q99684 422 aa10.34□□□□□ -0.75
VRK3-203ENST00000424804 YTHDF1Q9BYJ9 559 aaKnown RBP10.34□□□□□ -0.75
VRK3-203ENST00000424804 NECAP2Q9NVZ3 263 aa10.34□□□□□ -0.75
VRK3-203ENST00000424804 NDUFB11Q9NX14 153 aa10.34□□□□□ -0.75
VRK3-203ENST00000424804 RCC2Q9P258 522 aaKnown RBP10.34□□□□□ -0.75
VRK3-203ENST00000424804 LRRC42Q9Y546 428 aa10.34□□□□□ -0.75
VRK3-203ENST00000424804 SMIM30A4D0T7 59 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 FAM90A10PA6NDY2 464 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 FAM90A18PA6NE21 464 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 FAM90A16PA6NEW6 464 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 FAM90A20PA6NIJ5 464 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 FAM90A7PA6NKC0 464 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 FAM90A12PA8MX19 464 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 FAM90A5PA8MXJ8 464 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 FAM90A23PA8MXZ1 464 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 BUB1B-PAK6H3BSN5 160 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 CCRL2O00421 344 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 PDCD5O14737 125 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 SLC22A1O15245 554 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 BPNT1O95861 308 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 FAM90A15PP0C7V4 464 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 FAM90A13PP0C7W8 464 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 FAM90A14PP0C7W9 464 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 FAM90A24PP0C7X0 464 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 CGB3P0DN86 165 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 CGB7P0DN87 165 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 IGLL1P15814 213 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 GZMHP20718 246 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 BLVRBP30043 206 aaPredicted RBP10.33□□□□□ -0.76
VRK3-203ENST00000424804 CEACAM3P40198 252 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 ARHGDIBP52566 201 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 RPS27AP62979 156 aaKnown RBP10.33□□□□□ -0.76
VRK3-203ENST00000424804 UNC119Q13432 240 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 NEDD8Q15843 81 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 C22orf42Q6IC83 251 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 C6orf201Q7Z4U5 140 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 OR4F17Q8NGA8 305 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 OR5AU1Q8NGC0 362 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 OR51D1Q8NGF3 324 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 OR10X1Q8NGY0 326 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 MRAPQ8TCY5 172 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 TOMM40LQ969M1 308 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 OR4F4Q96R69 305 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 NCOR1P1Q9H4R4 102 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 CHMP1AQ9HD42 196 aaPredicted RBP10.33□□□□□ -0.76
VRK3-203ENST00000424804 PSG11Q9UQ72 335 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 AMMECR1Q9Y4X0 333 aaPredicted RBP10.33□□□□□ -0.76
VRK3-203ENST00000424804 V9GY05 133 aa10.33□□□□□ -0.76
VRK3-203ENST00000424804 H3BUI4 141 aa10.32□□□□□ -0.76
VRK3-203ENST00000424804 J3QR06 171 aa10.32□□□□□ -0.76
VRK3-203ENST00000424804 SLC17A2O00624 439 aa10.32□□□□□ -0.76
VRK3-203ENST00000424804 SPINT2O43291 252 aa10.32□□□□□ -0.76
VRK3-203ENST00000424804 RCC1P18754 421 aaPredicted RBP10.32□□□□□ -0.76
VRK3-203ENST00000424804 CD34P28906 385 aa10.32□□□□□ -0.76
VRK3-203ENST00000424804 BRS3P32247 399 aa10.32□□□□□ -0.76
VRK3-203ENST00000424804 MNDAP41218 407 aa10.32□□□□□ -0.76
VRK3-203ENST00000424804 VDAC2P45880 294 aaPredicted RBP10.32□□□□□ -0.76
VRK3-203ENST00000424804 OR10A3P58181 314 aa10.32□□□□□ -0.76
VRK3-203ENST00000424804 PAX5Q02548 391 aa10.32□□□□□ -0.76
VRK3-203ENST00000424804 C6orf183Q5T699 404 aa10.32□□□□□ -0.76
VRK3-203ENST00000424804 TPTE2P1Q5T6R2 138 aa10.32□□□□□ -0.76
VRK3-203ENST00000424804 UBE2UQ5VVX9 321 aa10.32□□□□□ -0.76
VRK3-203ENST00000424804 SIGIRRQ6IA17 410 aa10.32□□□□□ -0.76
VRK3-203ENST00000424804 FAM53AQ6NSI3 398 aaPredicted RBP10.32□□□□□ -0.76
VRK3-203ENST00000424804 ZNF773Q6PK81 442 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms