RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 PKIBQ9C010 78 aa12.99□□□□□ -0.33
C9orf3-204ENST00000424143 AKIRIN1Q9H9L7 192 aaPredicted RBP12.99□□□□□ -0.33
C9orf3-204ENST00000424143 OCIAD1Q9NX40 245 aa12.99□□□□□ -0.33
C9orf3-204ENST00000424143 NAT8Q9UHE5 227 aa12.99□□□□□ -0.33
C9orf3-204ENST00000424143 BRWD1Q9NSI6 2320 aa12.99□□□□□ -0.33
C9orf3-204ENST00000424143 TRBV23-1A0A0A0MS06 115 aa12.99□□□□□ -0.33
C9orf3-204ENST00000424143 OR5B21A6NL26 309 aa12.99□□□□□ -0.33
C9orf3-204ENST00000424143 TMEM250H0YL14 139 aa12.99□□□□□ -0.33
C9orf3-204ENST00000424143 CXCL13O43927 109 aa12.99□□□□□ -0.33
C9orf3-204ENST00000424143 RAB11AP62491 216 aa12.99□□□□□ -0.33
C9orf3-204ENST00000424143 CYP2G1PQ6ZSU1 146 aa12.99□□□□□ -0.33
C9orf3-204ENST00000424143 OR56B2PQ8NGI1 322 aa12.99□□□□□ -0.33
C9orf3-204ENST00000424143 OR10D3Q8NH80 312 aa12.99□□□□□ -0.33
C9orf3-204ENST00000424143 CLDN23Q96B33 292 aa12.99□□□□□ -0.33
C9orf3-204ENST00000424143 ALKBH3Q96Q83 286 aaPredicted RBP12.99□□□□□ -0.33
C9orf3-204ENST00000424143 GPR61Q9BZJ8 451 aa12.99□□□□□ -0.33
C9orf3-204ENST00000424143 FGF23Q9GZV9 251 aaPredicted RBP12.99□□□□□ -0.33
C9orf3-204ENST00000424143 MTCH1Q9NZJ7 389 aa12.99□□□□□ -0.33
C9orf3-204ENST00000424143 GNG13Q9P2W3 67 aa12.99□□□□□ -0.33
C9orf3-204ENST00000424143 OR14J1Q9UGF5 321 aa12.99□□□□□ -0.33
C9orf3-204ENST00000424143 CABIN1Q9Y6J0 2220 aa12.98□□□□□ -0.33
C9orf3-204ENST00000424143 TSTD3H0UI37 97 aa12.98□□□□□ -0.33
C9orf3-204ENST00000424143 PFN1P07737 140 aaKnown RBP12.98□□□□□ -0.33
C9orf3-204ENST00000424143 PATE4P0C8F1 98 aa12.98□□□□□ -0.33
C9orf3-204ENST00000424143 RPS18P62269 152 aaKnown RBP12.98□□□□□ -0.33
C9orf3-204ENST00000424143 JOSD1Q15040 202 aaPredicted RBP12.98□□□□□ -0.33
C9orf3-204ENST00000424143 ATP6V1FQ16864 119 aa12.98□□□□□ -0.33
C9orf3-204ENST00000424143 WDR25Q64LD2 544 aaPredicted RBP12.98□□□□□ -0.33
C9orf3-204ENST00000424143 SLC25A24Q6NUK1 477 aa12.98□□□□□ -0.33
C9orf3-204ENST00000424143 TMEM183AQ8IXX5 376 aa12.98□□□□□ -0.33
C9orf3-204ENST00000424143 CPEB3Q8NE35 698 aaKnown RBP12.98□□□□□ -0.33
C9orf3-204ENST00000424143 OR10A7Q8NGE5 316 aa12.98□□□□□ -0.33
C9orf3-204ENST00000424143 OR10J5Q8NHC4 309 aa12.98□□□□□ -0.33
C9orf3-204ENST00000424143 C14orf144Q96I85 54 aa12.98□□□□□ -0.33
C9orf3-204ENST00000424143 ACTR3CQ9C0K3 210 aaPredicted RBP12.98□□□□□ -0.33
C9orf3-204ENST00000424143 WNT16Q9UBV4 365 aa12.98□□□□□ -0.33
C9orf3-204ENST00000424143 MPC1Q9Y5U8 109 aa12.98□□□□□ -0.33
C9orf3-204ENST00000424143 PDCD1Q15116 288 aa12.97□□□□□ -0.33
C9orf3-204ENST00000424143 ZNF726P1Q15940 193 aa12.97□□□□□ -0.33
C9orf3-204ENST00000424143 C9orf152Q5JTZ5 239 aa12.97□□□□□ -0.33
C9orf3-204ENST00000424143 ZNF573Q86YE8 665 aa12.97□□□□□ -0.33
C9orf3-204ENST00000424143 OR10V1Q8NGI7 309 aa12.97□□□□□ -0.33
C9orf3-204ENST00000424143 ACY3Q96HD9 319 aa12.97□□□□□ -0.33
C9orf3-204ENST00000424143 JSRP1Q96MG2 331 aaPredicted RBP12.97□□□□□ -0.33
C9orf3-204ENST00000424143 HIST1H2AAQ96QV6 131 aa12.97□□□□□ -0.33
C9orf3-204ENST00000424143 WDR61Q9GZS3 305 aaKnown RBP12.97□□□□□ -0.33
C9orf3-204ENST00000424143 URGCP-MRPS24S4R325 110 aa12.97□□□□□ -0.33
C9orf3-204ENST00000424143 MED12Q93074 2177 aa12.97□□□□□ -0.33
C9orf3-204ENST00000424143 A0A0G2JRQ6 117 aa12.96□□□□□ -0.33
C9orf3-204ENST00000424143 LRRC3CA6NJW4 275 aa12.96□□□□□ -0.33
C9orf3-204ENST00000424143 CD300LBA8K4G0 201 aa12.96□□□□□ -0.33
C9orf3-204ENST00000424143 K7ESF4 209 aa12.96□□□□□ -0.33
C9orf3-204ENST00000424143 MBP02144 154 aa12.96□□□□□ -0.33
C9orf3-204ENST00000424143 PDLIM4P50479 330 aa12.96□□□□□ -0.33
C9orf3-204ENST00000424143 MSMO1Q15800 293 aa12.96□□□□□ -0.33
C9orf3-204ENST00000424143 MRPL21Q7Z2W9 205 aaKnown RBP12.96□□□□□ -0.33
C9orf3-204ENST00000424143 YRDCQ86U90 279 aaKnown RBP12.96□□□□□ -0.33
C9orf3-204ENST00000424143 OR5P3Q8WZ94 311 aa12.96□□□□□ -0.33
C9orf3-204ENST00000424143 HIST1H2BLQ99880 126 aa12.96□□□□□ -0.33
C9orf3-204ENST00000424143 LIN7CQ9NUP9 197 aaKnown RBP12.96□□□□□ -0.33
C9orf3-204ENST00000424143 PSENENQ9NZ42 101 aa12.96□□□□□ -0.33
C9orf3-204ENST00000424143 LRFN1Q9P244 771 aa12.96□□□□□ -0.33
C9orf3-204ENST00000424143 CACNA1EQ15878 2313 aa12.96□□□□□ -0.33
C9orf3-204ENST00000424143 SMCO3A2RU48 225 aa12.95□□□□□ -0.34
C9orf3-204ENST00000424143 RNF212BA8MTL3 300 aa12.95□□□□□ -0.34
C9orf3-204ENST00000424143 KBTBD11O94819 623 aa12.95□□□□□ -0.34
C9orf3-204ENST00000424143 DDTP30046 118 aa12.95□□□□□ -0.34
C9orf3-204ENST00000424143 ARR3P36575 388 aa12.95□□□□□ -0.34
C9orf3-204ENST00000424143 CEBPGP53567 150 aa12.95□□□□□ -0.34
C9orf3-204ENST00000424143 GFRA1P56159 465 aa12.95□□□□□ -0.34
C9orf3-204ENST00000424143 TMEM241Q24JQ0 296 aa12.95□□□□□ -0.34
C9orf3-204ENST00000424143 ZBTB34Q8NCN2 500 aa12.95□□□□□ -0.34
C9orf3-204ENST00000424143 PSMF1Q92530 271 aa12.95□□□□□ -0.34
C9orf3-204ENST00000424143 BTF3L4Q96K17 158 aa12.95□□□□□ -0.34
C9orf3-204ENST00000424143 NOL4LQ96MY1 436 aaPredicted RBP12.95□□□□□ -0.34
C9orf3-204ENST00000424143 ZNF665Q9H7R5 613 aa12.95□□□□□ -0.34
C9orf3-204ENST00000424143 NTN3O00634 580 aaPredicted RBP12.95□□□□□ -0.34
C9orf3-204ENST00000424143 SOX15O60248 233 aa12.95□□□□□ -0.34
C9orf3-204ENST00000424143 GCGP01275 180 aa12.95□□□□□ -0.34
C9orf3-204ENST00000424143 FOLR3P41439 243 aa12.95□□□□□ -0.34
C9orf3-204ENST00000424143 TMEM249Q2WGJ8 235 aa12.95□□□□□ -0.34
C9orf3-204ENST00000424143 TCEAL6Q6IPX3 200 aa12.95□□□□□ -0.34
C9orf3-204ENST00000424143 TMEM14EPQ6UXP3 125 aa12.95□□□□□ -0.34
C9orf3-204ENST00000424143 BEND2Q8NDZ0 799 aa12.95□□□□□ -0.34
C9orf3-204ENST00000424143 ANAPC16Q96DE5 110 aa12.95□□□□□ -0.34
C9orf3-204ENST00000424143 PACRGQ96M98 296 aaPredicted RBP12.95□□□□□ -0.34
C9orf3-204ENST00000424143 ZNF576Q9H609 170 aa12.95□□□□□ -0.34
C9orf3-204ENST00000424143 TRAV24A0A0B4J272 114 aa12.94□□□□□ -0.34
C9orf3-204ENST00000424143 MAP1LC3B2A6NCE7 125 aa12.94□□□□□ -0.34
C9orf3-204ENST00000424143 IGKV1-39P01597 117 aa12.94□□□□□ -0.34
C9orf3-204ENST00000424143 IGKV1D-39P04432 117 aa12.94□□□□□ -0.34
C9orf3-204ENST00000424143 TYMSP04818 313 aa12.94□□□□□ -0.34
C9orf3-204ENST00000424143 PSG2P11465 335 aa12.94□□□□□ -0.34
C9orf3-204ENST00000424143 FGF7P21781 194 aa12.94□□□□□ -0.34
C9orf3-204ENST00000424143 GPM6AP51674 278 aa12.94□□□□□ -0.34
C9orf3-204ENST00000424143 GNG3P63215 75 aa12.94□□□□□ -0.34
C9orf3-204ENST00000424143 ARF1P84077 181 aaKnown RBP12.94□□□□□ -0.34
C9orf3-204ENST00000424143 ZNF468Q5VIY5 522 aaPredicted RBP12.94□□□□□ -0.34
C9orf3-204ENST00000424143 Q6ZRM9 215 aa12.94□□□□□ -0.34
C9orf3-204ENST00000424143 HAPLN4Q86UW8 402 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms