RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 A0A1W2PRF3 423 aa13.87□□□□□ -0.19
FOXN4-203ENST00000423960 A0A1W2PRM7 423 aa13.87□□□□□ -0.19
FOXN4-203ENST00000423960 HBZP02008 142 aa13.87□□□□□ -0.19
FOXN4-203ENST00000423960 EIF4EP06730 217 aaKnown RBP13.87□□□□□ -0.19
FOXN4-203ENST00000423960 ELK1P19419 428 aa13.87□□□□□ -0.19
FOXN4-203ENST00000423960 EPHA1P21709 976 aa13.87□□□□□ -0.19
FOXN4-203ENST00000423960 NFYBP25208 207 aa13.87□□□□□ -0.19
FOXN4-203ENST00000423960 LTC4SQ16873 150 aa13.87□□□□□ -0.19
FOXN4-203ENST00000423960 PNLIPRP3Q17RR3 467 aa13.87□□□□□ -0.19
FOXN4-203ENST00000423960 RUSC1-AS1Q66K80 236 aa13.87□□□□□ -0.19
FOXN4-203ENST00000423960 BAIAP2L2Q6UXY1 529 aa13.87□□□□□ -0.19
FOXN4-203ENST00000423960 BRD3OSQ6XYD6 125 aa13.87□□□□□ -0.19
FOXN4-203ENST00000423960 MOB1BQ7L9L4 216 aa13.87□□□□□ -0.19
FOXN4-203ENST00000423960 PRR18Q8N4B5 295 aa13.87□□□□□ -0.19
FOXN4-203ENST00000423960 DTX3Q8N9I9 347 aa13.87□□□□□ -0.19
FOXN4-203ENST00000423960 UBALD1Q8TB05 177 aa13.87□□□□□ -0.19
FOXN4-203ENST00000423960 KIRREL1Q96J84 757 aa13.87□□□□□ -0.19
FOXN4-203ENST00000423960 SLIRPQ9GZT3 109 aaKnown RBP13.87□□□□□ -0.19
FOXN4-203ENST00000423960 MGAT4AQ9UM21 535 aa13.87□□□□□ -0.19
FOXN4-203ENST00000423960 TMEM235A6NFC5 223 aa13.86□□□□□ -0.19
FOXN4-203ENST00000423960 FAM25AB3EWG3 89 aa13.86□□□□□ -0.19
FOXN4-203ENST00000423960 FAM25CB3EWG5 89 aa13.86□□□□□ -0.19
FOXN4-203ENST00000423960 FAM25GB3EWG6 89 aa13.86□□□□□ -0.19
FOXN4-203ENST00000423960 MELTFP08582 738 aa13.86□□□□□ -0.19
FOXN4-203ENST00000423960 PITPNAQ00169 270 aa13.86□□□□□ -0.19
FOXN4-203ENST00000423960 TMEM69Q5SWH9 247 aa13.86□□□□□ -0.19
FOXN4-203ENST00000423960 Q6ZPA2 131 aa13.86□□□□□ -0.19
FOXN4-203ENST00000423960 C9orf139Q6ZV77 190 aa13.86□□□□□ -0.19
FOXN4-203ENST00000423960 IZUMO1Q8IYV9 350 aa13.86□□□□□ -0.19
FOXN4-203ENST00000423960 ABHD12Q8N2K0 398 aa13.86□□□□□ -0.19
FOXN4-203ENST00000423960 OR11H6Q8NGC7 330 aa13.86□□□□□ -0.19
FOXN4-203ENST00000423960 OR1L1Q8NH94 360 aa13.86□□□□□ -0.19
FOXN4-203ENST00000423960 C22orf15Q8WYQ4 148 aa13.86□□□□□ -0.19
FOXN4-203ENST00000423960 DCUN1D5Q9BTE7 237 aa13.86□□□□□ -0.19
FOXN4-203ENST00000423960 AUNIPQ9H7T9 357 aa13.86□□□□□ -0.19
FOXN4-203ENST00000423960 Q9N2K0 584 aa13.86□□□□□ -0.19
FOXN4-203ENST00000423960 DSCAML1Q8TD84 2053 aa13.86□□□□□ -0.19
FOXN4-203ENST00000423960 MXRA5Q9NR99 2828 aa13.86□□□□□ -0.19
FOXN4-203ENST00000423960 KIAA2026Q5HYC2 2103 aa13.85□□□□□ -0.19
FOXN4-203ENST00000423960 IGHV2-26A0A0B4J1V2 119 aa13.85□□□□□ -0.19
FOXN4-203ENST00000423960 RNF212BA8MTL3 300 aa13.85□□□□□ -0.19
FOXN4-203ENST00000423960 F2RL2O00254 374 aa13.85□□□□□ -0.19
FOXN4-203ENST00000423960 SDCBPO00560 298 aaPredicted RBP13.85□□□□□ -0.19
FOXN4-203ENST00000423960 CTDSP2O14595 271 aa13.85□□□□□ -0.19
FOXN4-203ENST00000423960 NPFFO15130 113 aa13.85□□□□□ -0.19
FOXN4-203ENST00000423960 RGS5O15539 181 aa13.85□□□□□ -0.19
FOXN4-203ENST00000423960 CD34P28906 385 aa13.85□□□□□ -0.19
FOXN4-203ENST00000423960 MNDAP41218 407 aa13.85□□□□□ -0.19
FOXN4-203ENST00000423960 GNG2P59768 71 aa13.85□□□□□ -0.19
FOXN4-203ENST00000423960 HMGN3Q15651 99 aa13.85□□□□□ -0.19
FOXN4-203ENST00000423960 MIDNQ504T8 468 aa13.85□□□□□ -0.19
FOXN4-203ENST00000423960 C5orf24Q7Z6I8 188 aa13.85□□□□□ -0.19
FOXN4-203ENST00000423960 BCL6BQ8N143 479 aaPredicted RBP13.85□□□□□ -0.19
FOXN4-203ENST00000423960 PIP4P2Q8N4L2 257 aa13.85□□□□□ -0.19
FOXN4-203ENST00000423960 OR52M1Q8NGK5 317 aa13.85□□□□□ -0.19
FOXN4-203ENST00000423960 CLEC7AQ9BXN2 247 aa13.85□□□□□ -0.19
FOXN4-203ENST00000423960 SOX21Q9Y651 276 aaPredicted RBP13.85□□□□□ -0.19
FOXN4-203ENST00000423960 A0A087X0M5 115 aa13.84□□□□□ -0.19
FOXN4-203ENST00000423960 A0A1B0GX30 115 aa13.84□□□□□ -0.19
FOXN4-203ENST00000423960 MEIOCA2RUB1 952 aa13.84□□□□□ -0.19
FOXN4-203ENST00000423960 FAM172BPA6NC97 362 aa13.84□□□□□ -0.19
FOXN4-203ENST00000423960 ARG1P05089 322 aa13.84□□□□□ -0.19
FOXN4-203ENST00000423960 FCGR3AP08637 254 aa13.84□□□□□ -0.19
FOXN4-203ENST00000423960 DTYMKP23919 212 aa13.84□□□□□ -0.19
FOXN4-203ENST00000423960 LGALS4P56470 323 aa13.84□□□□□ -0.19
FOXN4-203ENST00000423960 TAS2R20P59543 309 aa13.84□□□□□ -0.19
FOXN4-203ENST00000423960 SRSF7Q16629 238 aaKnown RBP eCLIP13.84□□□□□ -0.19
FOXN4-203ENST00000423960 TMEM30BQ3MIR4 351 aa13.84□□□□□ -0.19
FOXN4-203ENST00000423960 FOXB2Q5VYV0 432 aa13.84□□□□□ -0.19
FOXN4-203ENST00000423960 MCFD2Q8NI22 146 aa13.84□□□□□ -0.19
FOXN4-203ENST00000423960 NUDCD2Q8WVJ2 157 aa13.84□□□□□ -0.19
FOXN4-203ENST00000423960 GALMQ96C23 342 aa13.84□□□□□ -0.19
FOXN4-203ENST00000423960 C6orf62Q9GZU0 229 aaPredicted RBP13.84□□□□□ -0.19
FOXN4-203ENST00000423960 NXF2Q9GZY0 626 aaKnown RBP13.84□□□□□ -0.19
FOXN4-203ENST00000423960 MIXL1Q9H2W2 232 aa13.84□□□□□ -0.19
FOXN4-203ENST00000423960 GFOD1Q9NXC2 390 aa13.84□□□□□ -0.19
FOXN4-203ENST00000423960 ZNF230Q9UIE0 474 aaPredicted RBP13.84□□□□□ -0.19
FOXN4-203ENST00000423960 ADAM30Q9UKF2 790 aa13.84□□□□□ -0.19
FOXN4-203ENST00000423960 MRPS7Q9Y2R9 242 aaKnown RBP13.84□□□□□ -0.19
FOXN4-203ENST00000423960 COL6A5A8TX70 2615 aa13.83□□□□□ -0.19
FOXN4-203ENST00000423960 ODF3BA8MYP8 253 aa13.83□□□□□ -0.2
FOXN4-203ENST00000423960 TRDCB7Z8K6 153 aa13.83□□□□□ -0.2
FOXN4-203ENST00000423960 TOR1AO14656 332 aa13.83□□□□□ -0.2
FOXN4-203ENST00000423960 SAA4P35542 130 aa13.83□□□□□ -0.2
FOXN4-203ENST00000423960 PRRX1P54821 245 aa13.83□□□□□ -0.2
FOXN4-203ENST00000423960 LOXL3P58215 753 aa13.83□□□□□ -0.2
FOXN4-203ENST00000423960 HLA-DRB3P79483 266 aa13.83□□□□□ -0.2
FOXN4-203ENST00000423960 HTD2P86397 168 aa13.83□□□□□ -0.2
FOXN4-203ENST00000423960 SRSF2Q01130 221 aaKnown RBP13.83□□□□□ -0.2
FOXN4-203ENST00000423960 UTF1Q5T230 341 aa13.83□□□□□ -0.2
FOXN4-203ENST00000423960 ZNF626Q68DY1 528 aa13.83□□□□□ -0.2
FOXN4-203ENST00000423960 LEAP2Q969E1 77 aa13.83□□□□□ -0.2
FOXN4-203ENST00000423960 ST6GALNAC5Q9BVH7 336 aa13.83□□□□□ -0.2
FOXN4-203ENST00000423960 OCEL1Q9H607 264 aa13.83□□□□□ -0.2
FOXN4-203ENST00000423960 ZNF286AQ9HBT8 521 aa13.83□□□□□ -0.2
FOXN4-203ENST00000423960 GNG12Q9UBI6 72 aa13.83□□□□□ -0.2
FOXN4-203ENST00000423960 FAM96BQ9Y3D0 163 aa13.83□□□□□ -0.2
FOXN4-203ENST00000423960 IGHV3-43A0A0B4J1X8 118 aa13.82□□□□□ -0.2
FOXN4-203ENST00000423960 A0A0U1RQK1 487 aa13.82□□□□□ -0.2
FOXN4-203ENST00000423960 A6NHS1 94 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms