RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 ALKAL2Q6UX46 152 aa9.27□□□□□ -0.92
PTCH1-206ENST00000421141 PKIBQ9C010 78 aa9.27□□□□□ -0.92
PTCH1-206ENST00000421141 MED9Q9NWA0 146 aa9.27□□□□□ -0.92
PTCH1-206ENST00000421141 PTGDSP41222 190 aa9.27□□□□□ -0.92
PTCH1-206ENST00000421141 TMUB2Q71RG4 321 aa9.27□□□□□ -0.92
PTCH1-206ENST00000421141 OR1L8Q8NGR8 309 aa9.27□□□□□ -0.92
PTCH1-206ENST00000421141 YIPF5Q969M3 257 aa9.27□□□□□ -0.92
PTCH1-206ENST00000421141 UQCC1Q9NVA1 299 aa9.27□□□□□ -0.92
PTCH1-206ENST00000421141 SOCS1O15524 211 aa9.27□□□□□ -0.93
PTCH1-206ENST00000421141 TGFBR1P36897 503 aa9.27□□□□□ -0.93
PTCH1-206ENST00000421141 TMEM30BQ3MIR4 351 aa9.27□□□□□ -0.93
PTCH1-206ENST00000421141 CELF2-AS1Q8N7Q2 184 aa9.27□□□□□ -0.93
PTCH1-206ENST00000421141 FLVCR1-AS1Q8TAF5 88 aa9.27□□□□□ -0.93
PTCH1-206ENST00000421141 ATPIF1Q9UII2 106 aa9.27□□□□□ -0.93
PTCH1-206ENST00000421141 REG1BP48304 166 aa9.27□□□□□ -0.93
PTCH1-206ENST00000421141 ETV3LQ6ZN32 361 aa9.27□□□□□ -0.93
PTCH1-206ENST00000421141 PXT1Q8NFP0 134 aa9.27□□□□□ -0.93
PTCH1-206ENST00000421141 Q8WTZ3 238 aa9.27□□□□□ -0.93
PTCH1-206ENST00000421141 PPP1R1CQ8WVI7 109 aa9.27□□□□□ -0.93
PTCH1-206ENST00000421141 ATP5SQ99766 215 aa9.27□□□□□ -0.93
PTCH1-206ENST00000421141 PATZ1Q9HBE1 687 aaKnown RBP9.27□□□□□ -0.93
PTCH1-206ENST00000421141 POM121CA8CG34 1229 aa9.27□□□□□ -0.93
PTCH1-206ENST00000421141 BOLA2-SMG1P6H3BVE0 249 aa9.27□□□□□ -0.93
PTCH1-206ENST00000421141 TOX4O94842 621 aa9.27□□□□□ -0.93
PTCH1-206ENST00000421141 IL18BPO95998 194 aa9.27□□□□□ -0.93
PTCH1-206ENST00000421141 LYZP61626 148 aa9.27□□□□□ -0.93
PTCH1-206ENST00000421141 ZNF260Q3ZCT1 412 aa9.27□□□□□ -0.93
PTCH1-206ENST00000421141 GGNBP1Q5YKI7 109 aa9.27□□□□□ -0.93
PTCH1-206ENST00000421141 BCL2L2Q92843 193 aaPredicted RBP9.27□□□□□ -0.93
PTCH1-206ENST00000421141 SPRR3Q9UBC9 169 aa9.27□□□□□ -0.93
PTCH1-206ENST00000421141 C1orf196B1AJZ1 125 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 PPYP01298 95 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 CECR9P0C854 216 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 IGHV1-2P23083 117 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 ARF6P62330 175 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 SAXO1Q8IYX7 474 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 WNT5BQ9H1J7 359 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 PYCARD-AS1I3L0S3 204 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 TTRP02766 147 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 GNLYP22749 145 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 CLDN18P56856 261 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 PLA2G2CQ5R387 149 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 FAM122CQ6P4D5 195 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 SAMD10Q9BYL1 202 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 WASHC3Q9Y3C0 194 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 TXNL1O43396 289 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 RAB5CP51148 216 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 FFAR4Q5NUL3 377 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 HIST2H3PS2Q5TEC6 136 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 ZFP82Q8N141 532 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 NEURL1O76050 574 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 OR2H2O95918 312 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 GABRB1P18505 474 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 TIMP3P35625 211 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 DSCR9P59020 149 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 SLC25A53Q5H9E4 307 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 FNDC7Q5VTL7 733 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 PCSK4Q6UW60 755 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 C14orf79Q96F83 325 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 SH2D2AQ9NP31 389 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 PF4P02776 101 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 ROM1Q03395 351 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 ADIRFQ15847 76 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 SPINK9Q5DT21 86 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 ASCL3Q9NQ33 180 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 YAE1D1Q9NRH1 226 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 ZG16O60844 167 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 OR1L6Q8NGR2 347 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 ZNF106Q9H2Y7 1883 aaKnown RBP9.26□□□□□ -0.93
PTCH1-206ENST00000421141 MED12LQ86YW9 2145 aa9.26□□□□□ -0.93
PTCH1-206ENST00000421141 SSX1Q16384 188 aa9.25□□□□□ -0.93
PTCH1-206ENST00000421141 ZXDCQ2QGD7 858 aaPredicted RBP9.25□□□□□ -0.93
PTCH1-206ENST00000421141 LINC00303Q3SY05 128 aa9.25□□□□□ -0.93
PTCH1-206ENST00000421141 PFDN5Q99471 154 aa9.25□□□□□ -0.93
PTCH1-206ENST00000421141 SNRNP70P08621 437 aaKnown RBP9.25□□□□□ -0.93
PTCH1-206ENST00000421141 ID1P41134 155 aa9.25□□□□□ -0.93
PTCH1-206ENST00000421141 PXDC1Q5TGL8 231 aa9.25□□□□□ -0.93
PTCH1-206ENST00000421141 CLEC7AQ9BXN2 247 aa9.25□□□□□ -0.93
PTCH1-206ENST00000421141 SLC25A22Q9H936 323 aa9.25□□□□□ -0.93
PTCH1-206ENST00000421141 HBZP02008 142 aa9.25□□□□□ -0.93
PTCH1-206ENST00000421141 ZNF826PQ6ZT77 177 aa9.25□□□□□ -0.93
PTCH1-206ENST00000421141 GLRX5Q86SX6 157 aa9.25□□□□□ -0.93
PTCH1-206ENST00000421141 LILRB1Q8NHL6 650 aaPredicted RBP9.25□□□□□ -0.93
PTCH1-206ENST00000421141 TMEM106BQ9NUM4 274 aa9.25□□□□□ -0.93
PTCH1-206ENST00000421141 ZNF107Q9UII5 783 aaPredicted RBP9.25□□□□□ -0.93
PTCH1-206ENST00000421141 FLVCR2Q9UPI3 526 aa9.25□□□□□ -0.93
PTCH1-206ENST00000421141 KLHDC2Q9Y2U9 406 aa9.25□□□□□ -0.93
PTCH1-206ENST00000421141 IGHV2OR16-5A0A0B4J2B6 119 aa9.25□□□□□ -0.93
PTCH1-206ENST00000421141 ORM2P19652 201 aa9.25□□□□□ -0.93
PTCH1-206ENST00000421141 CENPVQ7Z7K6 275 aaPredicted RBP9.25□□□□□ -0.93
PTCH1-206ENST00000421141 FAM131CQ96AQ9 280 aa9.25□□□□□ -0.93
PTCH1-206ENST00000421141 ARHGAP21Q5T5U3 1957 aa9.25□□□□□ -0.93
PTCH1-206ENST00000421141 ZNHIT1O43257 154 aa9.25□□□□□ -0.93
PTCH1-206ENST00000421141 GVQW1Q8N7I0 195 aa9.25□□□□□ -0.93
PTCH1-206ENST00000421141 OR1A1Q9P1Q5 309 aa9.25□□□□□ -0.93
PTCH1-206ENST00000421141 KCNE5Q9UJ90 142 aa9.25□□□□□ -0.93
PTCH1-206ENST00000421141 SERTM2A0A1B0GWG4 89 aa9.25□□□□□ -0.93
PTCH1-206ENST00000421141 TGFBR3LH3BV60 316 aa9.25□□□□□ -0.93
PTCH1-206ENST00000421141 GSTZ1O43708 216 aaPredicted RBP9.25□□□□□ -0.93
PTCH1-206ENST00000421141 APELAP0DMC3 54 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms