RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 C1QTNF9BB2RNN3 333 aa13.66□□□□□ -0.22
CTSB-203ENST00000420692 SSSCA1O60232 199 aa13.66□□□□□ -0.22
CTSB-203ENST00000420692 NXPH3O95157 252 aa13.66□□□□□ -0.22
CTSB-203ENST00000420692 GRPP07492 148 aa13.66□□□□□ -0.22
CTSB-203ENST00000420692 CD80P33681 288 aa13.66□□□□□ -0.22
CTSB-203ENST00000420692 CEBPDP49716 269 aaPredicted RBP13.66□□□□□ -0.22
CTSB-203ENST00000420692 PAX9P55771 341 aa13.66□□□□□ -0.22
CTSB-203ENST00000420692 ZNF295-AS1Q8N0V1 137 aa13.66□□□□□ -0.22
CTSB-203ENST00000420692 HSD17B11Q8NBQ5 300 aa13.66□□□□□ -0.22
CTSB-203ENST00000420692 FAM212BQ9NTI7 297 aaPredicted RBP13.66□□□□□ -0.22
CTSB-203ENST00000420692 DKK4Q9UBT3 224 aa13.66□□□□□ -0.22
CTSB-203ENST00000420692 CACFD1Q9UGQ2 172 aa13.66□□□□□ -0.22
CTSB-203ENST00000420692 RNF115Q9Y4L5 304 aa13.66□□□□□ -0.22
CTSB-203ENST00000420692 RIF1Q5UIP0 2472 aaKnown RBP13.66□□□□□ -0.22
CTSB-203ENST00000420692 BORCS7-ASMTA0A0B4J1R7 106 aa13.66□□□□□ -0.22
CTSB-203ENST00000420692 DUXBA0A1W2PPF3 345 aa13.66□□□□□ -0.22
CTSB-203ENST00000420692 MED19A0JLT2 244 aaPredicted RBP13.66□□□□□ -0.22
CTSB-203ENST00000420692 TOR1AO14656 332 aa13.66□□□□□ -0.22
CTSB-203ENST00000420692 IGKV1-39P01597 117 aa13.66□□□□□ -0.22
CTSB-203ENST00000420692 IGKV1D-39P04432 117 aa13.66□□□□□ -0.22
CTSB-203ENST00000420692 IZUMO4Q1ZYL8 232 aa13.66□□□□□ -0.22
CTSB-203ENST00000420692 DEFB109BQ30KR1 87 aa13.66□□□□□ -0.22
CTSB-203ENST00000420692 SHEQ5VZ18 495 aa13.66□□□□□ -0.22
CTSB-203ENST00000420692 Q6ZRM9 215 aa13.66□□□□□ -0.22
CTSB-203ENST00000420692 ZNF826PQ6ZT77 177 aa13.66□□□□□ -0.22
CTSB-203ENST00000420692 TMEM252Q8N6L7 170 aa13.66□□□□□ -0.22
CTSB-203ENST00000420692 LYRM2Q9NU23 88 aaPredicted RBP13.66□□□□□ -0.22
CTSB-203ENST00000420692 WNT9BO14905 357 aa13.65□□□□□ -0.22
CTSB-203ENST00000420692 PITX3O75364 302 aa13.65□□□□□ -0.22
CTSB-203ENST00000420692 NXPH2O95156 264 aa13.65□□□□□ -0.22
CTSB-203ENST00000420692 PSG2P11465 335 aa13.65□□□□□ -0.22
CTSB-203ENST00000420692 CBLN2Q8IUK8 224 aa13.65□□□□□ -0.22
CTSB-203ENST00000420692 Q8IYB0 196 aa13.65□□□□□ -0.22
CTSB-203ENST00000420692 SPAG16Q8N0X2 631 aa13.65□□□□□ -0.22
CTSB-203ENST00000420692 PRR18Q8N4B5 295 aa13.65□□□□□ -0.22
CTSB-203ENST00000420692 OR10V1Q8NGI7 309 aa13.65□□□□□ -0.22
CTSB-203ENST00000420692 OR51H1Q8NH63 302 aa13.65□□□□□ -0.22
CTSB-203ENST00000420692 IL22RA2Q969J5 263 aa13.65□□□□□ -0.22
CTSB-203ENST00000420692 GPR146Q96CH1 333 aa13.65□□□□□ -0.22
CTSB-203ENST00000420692 SPIN2AQ99865 258 aa13.65□□□□□ -0.22
CTSB-203ENST00000420692 SPIN2BQ9BPZ2 258 aa13.65□□□□□ -0.22
CTSB-203ENST00000420692 HEATR1Q9H583 2144 aaKnown RBP13.65□□□□□ -0.22
CTSB-203ENST00000420692 HES4Q9HCC6 221 aa13.65□□□□□ -0.22
CTSB-203ENST00000420692 MBNL3Q9NUK0 354 aaKnown RBP13.65□□□□□ -0.22
CTSB-203ENST00000420692 POLDIP2Q9Y2S7 368 aa13.65□□□□□ -0.22
CTSB-203ENST00000420692 PSPNO60542 156 aa13.64□□□□□ -0.23
CTSB-203ENST00000420692 CNOT4O95628 575 aaKnown RBP13.64□□□□□ -0.23
CTSB-203ENST00000420692 SFTA3P0C7M3 94 aa13.64□□□□□ -0.23
CTSB-203ENST00000420692 OMGP23515 440 aa13.64□□□□□ -0.23
CTSB-203ENST00000420692 MDH2P40926 338 aaKnown RBP13.64□□□□□ -0.23
CTSB-203ENST00000420692 CLINT1Q14677 625 aa13.64□□□□□ -0.23
CTSB-203ENST00000420692 OR8G1Q15617 311 aa13.64□□□□□ -0.23
CTSB-203ENST00000420692 MIDNQ504T8 468 aa13.64□□□□□ -0.23
CTSB-203ENST00000420692 Q6ZR03 302 aa13.64□□□□□ -0.23
CTSB-203ENST00000420692 CLRN3Q8NCR9 226 aa13.64□□□□□ -0.23
CTSB-203ENST00000420692 WIPI2Q9Y4P8 454 aa13.64□□□□□ -0.23
CTSB-203ENST00000420692 DIDO1Q9BTC0 2240 aaKnown RBP13.64□□□□□ -0.23
CTSB-203ENST00000420692 PRR33A8MZF0 331 aa13.64□□□□□ -0.23
CTSB-203ENST00000420692 CHST1O43916 411 aa13.64□□□□□ -0.23
CTSB-203ENST00000420692 TNFSF13O75888 250 aa13.64□□□□□ -0.23
CTSB-203ENST00000420692 TFF1P04155 84 aa13.64□□□□□ -0.23
CTSB-203ENST00000420692 HEXAP06865 529 aa13.64□□□□□ -0.23
CTSB-203ENST00000420692 H2AFB1P0C5Y9 115 aa13.64□□□□□ -0.23
CTSB-203ENST00000420692 SNCAP37840 140 aa13.64□□□□□ -0.23
CTSB-203ENST00000420692 ACSF3Q4G176 576 aaPredicted RBP13.64□□□□□ -0.23
CTSB-203ENST00000420692 CXorf67Q86X51 503 aaPredicted RBP13.64□□□□□ -0.23
CTSB-203ENST00000420692 ABHD14BQ96IU4 210 aa13.64□□□□□ -0.23
CTSB-203ENST00000420692 PLEKHF2Q9H8W4 249 aa13.64□□□□□ -0.23
CTSB-203ENST00000420692 CEACAM4O75871 244 aa13.63□□□□□ -0.23
CTSB-203ENST00000420692 WNT2P09544 360 aa13.63□□□□□ -0.23
CTSB-203ENST00000420692 CECR9P0C854 216 aa13.63□□□□□ -0.23
CTSB-203ENST00000420692 HOXB1P14653 301 aaPredicted RBP13.63□□□□□ -0.23
CTSB-203ENST00000420692 DVL1P1P54792 670 aaPredicted RBP13.63□□□□□ -0.23
CTSB-203ENST00000420692 SWI5Q1ZZU3 235 aa13.63□□□□□ -0.23
CTSB-203ENST00000420692 DHRS7BQ6IAN0 325 aaPredicted RBP13.63□□□□□ -0.23
CTSB-203ENST00000420692 FAM53AQ6NSI3 398 aaPredicted RBP13.63□□□□□ -0.23
CTSB-203ENST00000420692 SEM1Q6ZVN7 128 aa13.63□□□□□ -0.23
CTSB-203ENST00000420692 PLSCR4Q9NRQ2 329 aa13.63□□□□□ -0.23
CTSB-203ENST00000420692 TRAPPC2LQ9UL33 140 aa13.63□□□□□ -0.23
CTSB-203ENST00000420692 FZR1Q9UM11 496 aa13.63□□□□□ -0.23
CTSB-203ENST00000420692 CHD3Q12873 2000 aaKnown RBP13.63□□□□□ -0.23
CTSB-203ENST00000420692 ZFHX2Q9C0A1 2572 aaPredicted RBP13.63□□□□□ -0.23
CTSB-203ENST00000420692 USF3Q68DE3 2245 aa13.63□□□□□ -0.23
CTSB-203ENST00000420692 WDR1O75083 606 aa13.63□□□□□ -0.23
CTSB-203ENST00000420692 CST7O76096 145 aa13.63□□□□□ -0.23
CTSB-203ENST00000420692 CGAP01215 116 aa13.63□□□□□ -0.23
CTSB-203ENST00000420692 ACAA1P09110 424 aaPredicted RBP13.63□□□□□ -0.23
CTSB-203ENST00000420692 EPHA1P21709 976 aa13.63□□□□□ -0.23
CTSB-203ENST00000420692 NFYBP25208 207 aa13.63□□□□□ -0.23
CTSB-203ENST00000420692 HMGN3Q15651 99 aa13.63□□□□□ -0.23
CTSB-203ENST00000420692 ZNF585BQ52M93 769 aa13.63□□□□□ -0.23
CTSB-203ENST00000420692 ZNF610Q8N9Z0 462 aa13.63□□□□□ -0.23
CTSB-203ENST00000420692 OR8G5Q8NG78 346 aa13.63□□□□□ -0.23
CTSB-203ENST00000420692 ABHD14AQ9BUJ0 271 aa13.63□□□□□ -0.23
CTSB-203ENST00000420692 C19orf12Q9NSK7 152 aa13.63□□□□□ -0.23
CTSB-203ENST00000420692 PPP1R3CQ9UQK1 317 aa13.63□□□□□ -0.23
CTSB-203ENST00000420692 CADP27708 2225 aa13.62□□□□□ -0.23
CTSB-203ENST00000420692 TMEM210A6NLX4 147 aa13.62□□□□□ -0.23
CTSB-203ENST00000420692 K7N7A8 449 aa13.62□□□□□ -0.23
CTSB-203ENST00000420692 SH2D1BO14796 132 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms