RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 IGHV3-13P01766 116 aa12.28□□□□□ -0.44
HLA-DPA1-242ENST00000419277 GRPP07492 148 aa12.28□□□□□ -0.44
HLA-DPA1-242ENST00000419277 ID3Q02535 119 aa12.28□□□□□ -0.44
HLA-DPA1-242ENST00000419277 SWI5Q1ZZU3 235 aa12.28□□□□□ -0.44
HLA-DPA1-242ENST00000419277 TUSC1Q2TAM9 212 aa12.28□□□□□ -0.44
HLA-DPA1-242ENST00000419277 RBMXL3Q8N7X1 1067 aaKnown RBP12.28□□□□□ -0.44
HLA-DPA1-242ENST00000419277 OR52M1Q8NGK5 317 aa12.28□□□□□ -0.44
HLA-DPA1-242ENST00000419277 OR1S2Q8NGQ3 325 aa12.28□□□□□ -0.44
HLA-DPA1-242ENST00000419277 GALMQ96C23 342 aa12.28□□□□□ -0.44
HLA-DPA1-242ENST00000419277 RAB40CQ96S21 281 aa12.28□□□□□ -0.44
HLA-DPA1-242ENST00000419277 C11orf1Q9H5F2 150 aa12.28□□□□□ -0.44
HLA-DPA1-242ENST00000419277 ERRFI1Q9UJM3 462 aaPredicted RBP12.28□□□□□ -0.44
HLA-DPA1-242ENST00000419277 LAMP3Q9UQV4 416 aa12.28□□□□□ -0.44
HLA-DPA1-242ENST00000419277 FAM215AQ9Y5M1 114 aa12.28□□□□□ -0.44
HLA-DPA1-242ENST00000419277 A6NLC8 198 aa12.28□□□□□ -0.44
HLA-DPA1-242ENST00000419277 FAM90A26D6RGX4 464 aa12.28□□□□□ -0.44
HLA-DPA1-242ENST00000419277 TRIM77I1YAP6 450 aa12.28□□□□□ -0.44
HLA-DPA1-242ENST00000419277 SELENOVP59797 346 aa12.28□□□□□ -0.44
HLA-DPA1-242ENST00000419277 VAMP2P63027 116 aa12.28□□□□□ -0.44
HLA-DPA1-242ENST00000419277 PJVKQ0ZLH3 352 aa12.28□□□□□ -0.44
HLA-DPA1-242ENST00000419277 FAM219AQ8IW50 185 aa12.28□□□□□ -0.44
HLA-DPA1-242ENST00000419277 GALNT11Q8NCW6 608 aa12.28□□□□□ -0.44
HLA-DPA1-242ENST00000419277 PLPPR1Q8TBJ4 325 aa12.28□□□□□ -0.44
HLA-DPA1-242ENST00000419277 IL1F10Q8WWZ1 152 aa12.28□□□□□ -0.44
HLA-DPA1-242ENST00000419277 NINJ1Q92982 152 aa12.28□□□□□ -0.44
HLA-DPA1-242ENST00000419277 LURAP1Q96LR2 239 aa12.28□□□□□ -0.44
HLA-DPA1-242ENST00000419277 DMRTA2Q96SC8 542 aa12.28□□□□□ -0.44
HLA-DPA1-242ENST00000419277 NCOR1P1Q9H4R4 102 aa12.28□□□□□ -0.44
HLA-DPA1-242ENST00000419277 COA4Q9NYJ1 87 aa12.28□□□□□ -0.44
HLA-DPA1-242ENST00000419277 LUZP4Q9P127 313 aa12.28□□□□□ -0.44
HLA-DPA1-242ENST00000419277 URB1O60287 2271 aaKnown RBP12.27□□□□□ -0.45
HLA-DPA1-242ENST00000419277 UMAD1C9J7I0 102 aa12.27□□□□□ -0.45
HLA-DPA1-242ENST00000419277 WRBO00258 174 aa12.27□□□□□ -0.45
HLA-DPA1-242ENST00000419277 HSD17B6O14756 317 aa12.27□□□□□ -0.45
HLA-DPA1-242ENST00000419277 CAV2P51636 162 aa12.27□□□□□ -0.45
HLA-DPA1-242ENST00000419277 KLF3P57682 345 aaPredicted RBP12.27□□□□□ -0.45
HLA-DPA1-242ENST00000419277 CATR1Q13166 79 aa12.27□□□□□ -0.45
HLA-DPA1-242ENST00000419277 TESK1Q15569 626 aa12.27□□□□□ -0.45
HLA-DPA1-242ENST00000419277 IGFBP7Q16270 282 aa12.27□□□□□ -0.45
HLA-DPA1-242ENST00000419277 ALKBH6Q3KRA9 238 aa12.27□□□□□ -0.45
HLA-DPA1-242ENST00000419277 MRGPRGQ86SM5 289 aa12.27□□□□□ -0.45
HLA-DPA1-242ENST00000419277 C11orf53Q8IXP5 236 aa12.27□□□□□ -0.45
HLA-DPA1-242ENST00000419277 ZNF645Q8N7E2 425 aa12.27□□□□□ -0.45
HLA-DPA1-242ENST00000419277 DMBX1Q8NFW5 382 aa12.27□□□□□ -0.45
HLA-DPA1-242ENST00000419277 LYPD6BQ8NI32 183 aa12.27□□□□□ -0.45
HLA-DPA1-242ENST00000419277 CUL9Q8IWT3 2517 aa12.27□□□□□ -0.45
HLA-DPA1-242ENST00000419277 CHD3Q12873 2000 aaKnown RBP12.27□□□□□ -0.45
HLA-DPA1-242ENST00000419277 IGLV3-9A0A075B6K5 115 aa12.26□□□□□ -0.45
HLA-DPA1-242ENST00000419277 NKX2-6A6NCS4 301 aa12.26□□□□□ -0.45
HLA-DPA1-242ENST00000419277 ZSCAN5BA6NJL1 495 aa12.26□□□□□ -0.45
HLA-DPA1-242ENST00000419277 SRRM5B3KS81 715 aa12.26□□□□□ -0.45
HLA-DPA1-242ENST00000419277 ADAM20O43506 726 aa12.26□□□□□ -0.45
HLA-DPA1-242ENST00000419277 AGFG2O95081 481 aa12.26□□□□□ -0.45
HLA-DPA1-242ENST00000419277 SCAF4O95104 1147 aaKnown RBP12.26□□□□□ -0.45
HLA-DPA1-242ENST00000419277 SPP1P10451 314 aa12.26□□□□□ -0.45
HLA-DPA1-242ENST00000419277 GATA4P43694 442 aa12.26□□□□□ -0.45
HLA-DPA1-242ENST00000419277 SVBPQ8N300 66 aa12.26□□□□□ -0.45
HLA-DPA1-242ENST00000419277 LFNGQ8NES3 379 aa12.26□□□□□ -0.45
HLA-DPA1-242ENST00000419277 C17orf50Q8WW18 174 aa12.26□□□□□ -0.45
HLA-DPA1-242ENST00000419277 ERGIC1Q969X5 290 aa12.26□□□□□ -0.45
HLA-DPA1-242ENST00000419277 ELOVL5Q9NYP7 299 aa12.26□□□□□ -0.45
HLA-DPA1-242ENST00000419277 RBM7Q9Y580 266 aaKnown RBP12.26□□□□□ -0.45
HLA-DPA1-242ENST00000419277 WSB1Q9Y6I7 421 aa12.26□□□□□ -0.45
HLA-DPA1-242ENST00000419277 PRRG2O14669 202 aa12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 ZNHIT1O43257 154 aa12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 KCNAB3O43448 404 aa12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 MED6O75586 246 aa12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 ADH4P08319 380 aa12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 IL2RGP31785 369 aa12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 NKX6-1P78426 367 aaPredicted RBP12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 HTD2P86397 168 aa12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 EWSR1Q01844 656 aaKnown RBP eCLIP12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 PXDC1Q5TGL8 231 aa12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 STX12Q86Y82 276 aa12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 LRFN3Q9BTN0 628 aa12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 RIF1Q5UIP0 2472 aaKnown RBP12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 TMEM218A2RU14 115 aa12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 H0YL77 283 aa12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 DFFBO76075 338 aa12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 LY86O95711 162 aa12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 TAS2R30P59541 319 aa12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 RPL23AP62750 156 aaKnown RBP12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 MIDNQ504T8 468 aa12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 C10orf91Q5T1B1 145 aa12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 Q6ZR03 302 aa12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 EDARADDQ8WWZ3 215 aa12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 S100PBPQ96BU1 408 aa12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 GNPNAT1Q96EK6 184 aaPredicted RBP12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 SEC11CQ9BY50 192 aa12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 SMDT1Q9H4I9 107 aa12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 OR14J1Q9UGF5 321 aa12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 CACFD1Q9UGQ2 172 aa12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 CARHSP1Q9Y2V2 147 aaKnown RBP12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 MUC6Q6W4X9 2439 aa12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 GVINP1Q7Z2Y8 2422 aa12.25□□□□□ -0.45
HLA-DPA1-242ENST00000419277 SPINT2O43291 252 aa12.24□□□□□ -0.45
HLA-DPA1-242ENST00000419277 DANCRP0C864 163 aa12.24□□□□□ -0.45
HLA-DPA1-242ENST00000419277 FABP6P51161 128 aa12.24□□□□□ -0.45
HLA-DPA1-242ENST00000419277 TAGLNQ01995 201 aaKnown RBP12.24□□□□□ -0.45
HLA-DPA1-242ENST00000419277 TMEM30BQ3MIR4 351 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms