RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 SLC25A10Q9UBX3 287 aaPredicted RBP4.98□□□□□ -1.61
HMGB3-202ENST00000419110 SLC23A1Q9UHI7 598 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 OPN4Q9UHM6 478 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 PCDHB10Q9UN67 800 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 FLVCR2Q9UPI3 526 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 LAMP3Q9UQV4 416 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 FLNCQ14315 2725 aa4.98□□□□□ -1.61
HMGB3-202ENST00000419110 TRBV6-7A0A0A0MS04 114 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 TRBV23-1A0A0A0MS06 115 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 PIGBOS1A0A0B4J2F0 54 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 hADV38S2A0JD32 116 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 OR5H14A6NHG9 310 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 HMX3A6NHT5 357 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 C12orf77C9JDV5 145 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 NDUFB3O43676 98 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 RGS11O94810 467 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 ZNF205O95201 554 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 FSTL3O95633 263 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 HBZP02008 142 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 TFF1P04155 84 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 SOD3P08294 240 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 OR4E1P0C645 316 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 DANCRP0C864 163 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 GSTT2P0CG29 244 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 SELLP14151 372 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 DAOP14920 347 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 NDUFB7P17568 137 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 RCC1P18754 421 aaPredicted RBP4.97□□□□□ -1.61
HMGB3-202ENST00000419110 NFYAP23511 347 aaPredicted RBP4.97□□□□□ -1.61
HMGB3-202ENST00000419110 CD34P28906 385 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 ERP29P30040 261 aaKnown RBP4.97□□□□□ -1.61
HMGB3-202ENST00000419110 SSTR5P35346 364 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 SRPXP78539 464 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 HOXA4Q00056 320 aaPredicted RBP4.97□□□□□ -1.61
HMGB3-202ENST00000419110 AESQ08117 197 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 HERPUD1Q15011 391 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 CARTPTQ16568 116 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 MST1LQ2TV78 715 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 TMEM128Q5BJH2 165 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 IGSF11Q5DX21 431 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 AADACL3Q5VUY0 350 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 LPCAT3Q6P1A2 487 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 Q6ZPA2 131 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 SLC25A42Q86VD7 318 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 SGPP2Q8IWX5 399 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 CMTM1Q8IZ96 169 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 H1FOOQ8IZA3 346 aaPredicted RBP4.97□□□□□ -1.61
HMGB3-202ENST00000419110 OR8B3Q8NGG8 313 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 OR13A1Q8NGR1 328 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 COQ8AQ8NI60 647 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 SECTM1Q8WVN6 248 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 ASB13Q8WXK3 278 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 RAB1CQ92928 201 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 GALMQ96C23 342 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 RAB39BQ96DA2 213 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 OR8B2Q96RD0 313 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 CCL13Q99616 98 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 SLC5A7Q9GZV3 580 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 ALX4Q9H161 411 aaPredicted RBP4.97□□□□□ -1.61
HMGB3-202ENST00000419110 GHITMQ9H3K2 345 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 NCOR1P1Q9H4R4 102 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 CHODLQ9H9P2 273 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 SLC2A9Q9NRM0 540 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 LIN7CQ9NUP9 197 aaKnown RBP4.97□□□□□ -1.61
HMGB3-202ENST00000419110 DCAF16Q9NXF7 216 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 GNG12Q9UBI6 72 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 MGAT4CQ9UBM8 478 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 JPT1Q9UK76 154 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 RBM7Q9Y580 266 aaKnown RBP4.97□□□□□ -1.61
HMGB3-202ENST00000419110 LINC00312Q9Y6C7 94 aa4.97□□□□□ -1.61
HMGB3-202ENST00000419110 ANKRD17O75179 2603 aaKnown RBP4.96□□□□□ -1.61
HMGB3-202ENST00000419110 TEX13DA0A0J9YY54 714 aaPredicted RBP4.96□□□□□ -1.62
HMGB3-202ENST00000419110 A0A1W2PPH5 198 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 A1L4Q6 167 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 ZNF729A6NN14 1252 aaPredicted RBP4.96□□□□□ -1.62
HMGB3-202ENST00000419110 RNF212BA8MTL3 300 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 BOLA2-SMG1P6H3BVE0 249 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 J3QKU1 62 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 GPR31O00270 319 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 GOSR2O14653 212 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 PPIHO43447 177 aaKnown RBP4.96□□□□□ -1.62
HMGB3-202ENST00000419110 RP2O75695 350 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 TUSC2O75896 110 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 IFNA2P01563 188 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 IGHV2-70P01814 119 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 GIPP09681 153 aaPredicted RBP4.96□□□□□ -1.62
HMGB3-202ENST00000419110 SCTP09683 121 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 RNF224P0DH78 156 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 VSIG10L2P0DP72 767 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 AKR1C4P17516 323 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 ZBTB25P24278 435 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 CDKN1AP38936 164 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 GPR6P46095 362 aaPredicted RBP4.96□□□□□ -1.62
HMGB3-202ENST00000419110 GLIPR1P48060 266 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 LUMP51884 338 aaPredicted RBP4.96□□□□□ -1.62
HMGB3-202ENST00000419110 UCP3P55916 312 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 PIGPP57054 158 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 CD83Q01151 205 aa4.96□□□□□ -1.62
HMGB3-202ENST00000419110 MEF2CQ06413 473 aaPredicted RBP4.96□□□□□ -1.62
HMGB3-202ENST00000419110 CATR1Q13166 79 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms