RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 CLN5O75503 358 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 NAPSAO96009 420 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 FABP1P07148 127 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 LHX2P50458 406 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 MRPL30Q8TCC3 161 aaKnown RBP10.14□□□□□ -0.79
LIMK1-202ENST00000418310 APOBEC3DQ96AK3 386 aaPredicted RBP10.14□□□□□ -0.79
LIMK1-202ENST00000418310 TTTY12Q9BZ98 90 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 ZNF703Q9H7S9 590 aaPredicted RBP10.14□□□□□ -0.79
LIMK1-202ENST00000418310 IL17BQ9UHF5 180 aa10.14□□□□□ -0.79
LIMK1-202ENST00000418310 CHD3Q12873 2000 aaKnown RBP10.14□□□□□ -0.79
LIMK1-202ENST00000418310 ROS1P08922 2347 aa10.13□□□□□ -0.79
LIMK1-202ENST00000418310 APLNRP35414 380 aa10.13□□□□□ -0.79
LIMK1-202ENST00000418310 WNT5AP41221 380 aa10.13□□□□□ -0.79
LIMK1-202ENST00000418310 ALKBH6Q3KRA9 238 aa10.13□□□□□ -0.79
LIMK1-202ENST00000418310 NMSQ5H8A3 153 aa10.13□□□□□ -0.79
LIMK1-202ENST00000418310 TMPRSS7Q7RTY8 843 aa10.13□□□□□ -0.79
LIMK1-202ENST00000418310 STX12Q86Y82 276 aa10.13□□□□□ -0.79
LIMK1-202ENST00000418310 TMEM251Q8N6I4 163 aa10.13□□□□□ -0.79
LIMK1-202ENST00000418310 PLK3Q9H4B4 646 aa10.13□□□□□ -0.79
LIMK1-202ENST00000418310 RNF122Q9H9V4 155 aa10.13□□□□□ -0.79
LIMK1-202ENST00000418310 ZNF391Q9UJN7 358 aa10.13□□□□□ -0.79
LIMK1-202ENST00000418310 ATP23Q9Y6H3 246 aa10.13□□□□□ -0.79
LIMK1-202ENST00000418310 KIR2DS1A0A191URI9 304 aa10.13□□□□□ -0.79
LIMK1-202ENST00000418310 DEGS1O15121 323 aa10.13□□□□□ -0.79
LIMK1-202ENST00000418310 CXCL1P09341 107 aa10.13□□□□□ -0.79
LIMK1-202ENST00000418310 BMP5P22003 454 aa10.13□□□□□ -0.79
LIMK1-202ENST00000418310 F2RP25116 425 aa10.13□□□□□ -0.79
LIMK1-202ENST00000418310 KIR2DS4P43632 304 aa10.13□□□□□ -0.79
LIMK1-202ENST00000418310 RAB5CP51148 216 aa10.13□□□□□ -0.79
LIMK1-202ENST00000418310 IDH3GP51553 393 aaPredicted RBP10.13□□□□□ -0.79
LIMK1-202ENST00000418310 CLDN18P56856 261 aa10.13□□□□□ -0.79
LIMK1-202ENST00000418310 B2MP61769 119 aa10.13□□□□□ -0.79
LIMK1-202ENST00000418310 KIR2DS1Q14954 304 aa10.13□□□□□ -0.79
LIMK1-202ENST00000418310 LTC4SQ16873 150 aa10.13□□□□□ -0.79
LIMK1-202ENST00000418310 FAM58AQ8N1B3 248 aa10.13□□□□□ -0.79
LIMK1-202ENST00000418310 ARRDC1-AS1Q9H2J1 176 aa10.13□□□□□ -0.79
LIMK1-202ENST00000418310 MIOXQ9UGB7 285 aa10.13□□□□□ -0.79
LIMK1-202ENST00000418310 BDP1A6H8Y1 2624 aa10.13□□□□□ -0.79
LIMK1-202ENST00000418310 MT-CO3P00414 261 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 DEFA4P12838 97 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 SRPXP78539 464 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 CLN3Q13286 438 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 TRA2AQ13595 282 aaKnown RBP eCLIP10.12□□□□□ -0.79
LIMK1-202ENST00000418310 SSPNQ14714 243 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 LILRB2Q8N423 598 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 PLPPR1Q8TBJ4 325 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 TMEM56Q96MV1 263 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 DLL3Q9NYJ7 618 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 FZR1Q9UM11 496 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 TMEM56-RWDD3S4R434 201 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 LAMA5O15230 3695 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 CDIPTO14735 213 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 CYB5BO43169 146 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 SCAF4O95104 1147 aaKnown RBP10.12□□□□□ -0.79
LIMK1-202ENST00000418310 IFNA5P01569 189 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 AGAP20933 346 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 PAX9P55771 341 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 LINC00205P59089 165 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 ARL16Q0P5N6 197 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 PCSK4Q6UW60 755 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 BEND4Q6ZU67 534 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 TPRX1Q8N7U7 411 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 SPSB4Q96A44 273 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 B4GALT7Q9UBV7 327 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 PCSK5Q92824 1860 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 CACNA1HO95180 2353 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 C9orf172C9J069 976 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 SRP19P09132 144 aaKnown RBP10.12□□□□□ -0.79
LIMK1-202ENST00000418310 UCP1P25874 307 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 PMP22Q01453 160 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 ICAM4Q14773 271 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 KRTAP27-1Q3LI81 207 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 CDPF1Q6NVV7 123 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 COMMD1Q8N668 190 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 Q8WTZ3 238 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 FAM173AQ9BQD7 235 aa10.12□□□□□ -0.79
LIMK1-202ENST00000418310 RBMXL2O75526 392 aaKnown RBP10.11□□□□□ -0.79
LIMK1-202ENST00000418310 ERVFRD-1P60508 538 aa10.11□□□□□ -0.79
LIMK1-202ENST00000418310 RHEBQ15382 184 aa10.11□□□□□ -0.79
LIMK1-202ENST00000418310 MDP1Q86V88 176 aa10.11□□□□□ -0.79
LIMK1-202ENST00000418310 OR5T1Q8NG75 326 aa10.11□□□□□ -0.79
LIMK1-202ENST00000418310 RBMXL1Q96E39 390 aaKnown RBP10.11□□□□□ -0.79
LIMK1-202ENST00000418310 POM121L2Q96KW2 1035 aa10.11□□□□□ -0.79
LIMK1-202ENST00000418310 NIPSNAP3BQ9BS92 247 aa10.11□□□□□ -0.79
LIMK1-202ENST00000418310 RPRMQ9NS64 109 aa10.11□□□□□ -0.79
LIMK1-202ENST00000418310 OR2W1Q9Y3N9 320 aa10.11□□□□□ -0.79
LIMK1-202ENST00000418310 TECTAO75443 2155 aa10.11□□□□□ -0.79
LIMK1-202ENST00000418310 IGHV3-13P01766 116 aa10.11□□□□□ -0.79
LIMK1-202ENST00000418310 IGHV3-7P01780 117 aa10.11□□□□□ -0.79
LIMK1-202ENST00000418310 ID3Q02535 119 aa10.11□□□□□ -0.79
LIMK1-202ENST00000418310 ZNF816Q0VGE8 651 aaPredicted RBP10.11□□□□□ -0.79
LIMK1-202ENST00000418310 COLCA1Q6ZS62 124 aa10.11□□□□□ -0.79
LIMK1-202ENST00000418310 FAM185AQ8N0U4 392 aa10.11□□□□□ -0.79
LIMK1-202ENST00000418310 NECAP1Q8NC96 275 aa10.11□□□□□ -0.79
LIMK1-202ENST00000418310 LFNGQ8NES3 379 aa10.11□□□□□ -0.79
LIMK1-202ENST00000418310 SCGB1C1Q8TD33 95 aa10.11□□□□□ -0.79
LIMK1-202ENST00000418310 GSN-AS1Q9NRJ2 163 aa10.11□□□□□ -0.79
LIMK1-202ENST00000418310 UBE2L5PA0A1B0GUS4 154 aa10.11□□□□□ -0.79
LIMK1-202ENST00000418310 KIAA1324LA8MWY0 1029 aaPredicted RBP10.11□□□□□ -0.79
LIMK1-202ENST00000418310 LYZL6O75951 148 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms