RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 SOCS1O15524 211 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 CHST1O43916 411 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 TBX19O60806 448 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 HOXD4P09016 255 aaPredicted RBP9.82□□□□□ -0.84
PTCH1-205ENST00000418258 MESTQ5EB52 335 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 WDR73Q6P4I2 378 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 OR2V2Q96R30 315 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 DCTN5Q9BTE1 182 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 A0A1W2PPE3 182 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 PHOX2AO14813 284 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 GALP22466 123 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 CEBPDP49716 269 aaPredicted RBP9.82□□□□□ -0.84
PTCH1-205ENST00000418258 GFRA1P56159 465 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 DLX1P56177 255 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 ST3GAL2Q16842 350 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 FRRS1LQ9P0K9 344 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 ANXA10Q9UJ72 324 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 CGB1A6NKQ9 187 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 PRSS44E7EML9 344 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 PF4P02776 101 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 INHBBP09529 407 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 HLA-DRB3P79483 266 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 ZIC1Q15915 447 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 ATG4DQ86TL0 474 aaPredicted RBP9.82□□□□□ -0.84
PTCH1-205ENST00000418258 PRR19A6NJB7 356 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 C11orf94C9JXX5 98 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 J3QR06 171 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 ERVS71-1P61550 626 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 UQCC3Q6UW78 93 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 SHISA5Q8N114 240 aa9.82□□□□□ -0.84
PTCH1-205ENST00000418258 M0R3E3 92 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 CLDN14O95500 239 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 PRDX2P32119 198 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 TEX261Q6UWH6 196 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 NFAM1Q8NET5 270 aaPredicted RBP9.81□□□□□ -0.84
PTCH1-205ENST00000418258 OR10J6PQ8NGY7 276 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 MRM2Q9UI43 246 aaKnown RBP9.81□□□□□ -0.84
PTCH1-205ENST00000418258 B4E171 279 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 DAOP14920 347 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 SPNP16150 400 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 TSPAN7P41732 249 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 TCL1AP56279 114 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 ANKRD55Q3KP44 614 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 ZBTB44Q8NCP5 570 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 SLC52A3Q9NQ40 469 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 PARP14Q460N5 1801 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 PSG6Q00889 435 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 TMEM183BQ1AE95 376 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 OR4A5Q8NH83 315 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 ANGPTL6Q8NI99 470 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 MPC2O95563 127 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 ZNF841Q6ZN19 808 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 C9orf40Q8IXQ3 194 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 C17orf47Q8NEP4 570 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 OR2D3Q8NGH3 330 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 ZCCHC14Q8WYQ9 949 aaKnown RBP9.81□□□□□ -0.84
PTCH1-205ENST00000418258 PRR13Q9NZ81 148 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 AHRRA9YTQ3 701 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 H3BVH4 76 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 KCNAB3O43448 404 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 SYNGR2O43760 224 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 LOXL4Q96JB6 756 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 LOC389332A0A1B0GUA5 103 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 FFAR1O14842 300 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 PPOXP50336 477 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 CCL13Q99616 98 aa9.81□□□□□ -0.84
PTCH1-205ENST00000418258 TMSB15BA0A087X1C1 80 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 CLDN18P56856 261 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 SCAND1P57086 179 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 SRSF9Q13242 221 aaKnown RBP eCLIP9.8□□□□□ -0.84
PTCH1-205ENST00000418258 LRP11Q86VZ4 500 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 DTD1Q8TEA8 209 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 TRAV34A0A0B4J273 112 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 SMPD2O60906 423 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 PPYP01298 95 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 KIAA0040Q15053 153 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 Q6ZNX1 250 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 FBXL17Q9UF56 701 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 ARID2Q68CP9 1835 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 IL24Q13007 206 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 C1orf174Q8IYL3 243 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 OR1K1Q8NGR3 316 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 TRAV39A0A0B4J263 110 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 GCSHP23434 173 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 ZNF137PP52743 207 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 AANATQ16613 207 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 C19orf54Q5BKX5 351 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 LIMS2Q7Z4I7 341 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 HSD17B13Q7Z5P4 300 aaPredicted RBP9.8□□□□□ -0.84
PTCH1-205ENST00000418258 ZNF738Q8NE65 137 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 RPS4Y2Q8TD47 263 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 PACRGQ96M98 296 aaPredicted RBP9.8□□□□□ -0.84
PTCH1-205ENST00000418258 HIGD1AQ9Y241 93 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 HELTA6NFD8 242 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 FAM157CP0CG43 387 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 GABRA6Q16445 453 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 LY6EQ16553 131 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 MPV17LQ2QL34 196 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 GBGT1Q8N5D6 347 aa9.8□□□□□ -0.84
PTCH1-205ENST00000418258 CHAC2Q8WUX2 184 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms