RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 COMPP49747 757 aaPredicted RBP6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 LRRC75BQ2VPJ9 315 aa6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 FAM78BQ5VT40 261 aa6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 HLA-DQA1Q5Y7H0 255 aa6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 VN1R17PQ8TDU5 208 aa6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 ST8SIA1Q92185 356 aa6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 RAB40CQ96S21 281 aa6.89□□□□□ -1.31
HMGXB4-202ENST00000418170 TRAV39A0A0B4J263 110 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 OR2J2O76002 312 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 ATXN8OSP0DMR3 200 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 PPP1CBP62140 327 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 SPIN3Q5JUX0 258 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 WDR5BQ86VZ2 330 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 SLC37A2Q8TED4 501 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 ALKBH3Q96Q83 286 aaPredicted RBP6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 ZNF160Q9HCG1 818 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 SLC7A10Q9NS82 523 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 SLC39A9Q9NUM3 307 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 TP53TG3Q9ULZ0 132 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 SLC45A2Q9UMX9 530 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 WIPI2Q9Y4P8 454 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 A0A1W2PN81 502 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 OR6C6A6NF89 314 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 TNFRSF10CO14798 259 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 SPRY1O43609 319 aaPredicted RBP6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 OR5G3P0C626 314 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 CD99P14209 185 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 CHRNA7P36544 502 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 LINC00310P59036 64 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 ETFRF1Q6IPR1 90 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 OR4B1Q8NGF8 309 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 SPSB1Q96BD6 273 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 HSPB9Q9BQS6 159 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 ZFHX4Q86UP3 3567 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 KIAA1324LA8MWY0 1029 aaPredicted RBP6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 CNOT4O95628 575 aaKnown RBP6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 TOMM40O96008 361 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 HNF1AP20823 631 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 ADMP35318 185 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 UBE2V1Q13404 147 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 PIGYQ3MUY2 71 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 FAM180AQ6UWF9 173 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 ZNF818PQ6ZRF7 136 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 RPP25LQ8N5L8 163 aaKnown RBP6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 OR5D13Q8NGL4 314 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 WWTR1Q9GZV5 400 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 UBE2ZQ9H832 354 aaPredicted RBP6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 PLA2G3Q9NZ20 509 aa6.88□□□□□ -1.31
HMGXB4-202ENST00000418170 TMEM150CB9EJG8 249 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 HS3ST1O14792 307 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 MLNRO43193 412 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 GALR2O43603 387 aaPredicted RBP6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 NXPH2O95156 264 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 TLE1Q04724 770 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 DLX2Q07687 328 aaPredicted RBP6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 FOXL1Q12952 345 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 TESK1Q15569 626 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 TMEM211Q6ICI0 200 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 LYG1Q8N1E2 194 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 OR4F5Q8NH21 305 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 OR4F4Q96R69 305 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 GPHA2Q96T91 129 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 PARD6GQ9BYG4 376 aaPredicted RBP6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 PPIAL4AQ9Y536 164 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 THADAQ6YHU6 1953 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 RALGAPA1Q6GYQ0 2036 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 A8MXE2 369 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 ZNF814B7Z6K7 855 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 ACRP10323 421 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 CTRLP40313 264 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 YPEL3P61236 119 aaPredicted RBP6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 ARL16Q0P5N6 197 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 ATP6V1FQ16864 119 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 ASCL4Q6XD76 172 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 GAPTQ8N292 157 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 OR1L6Q8NGR2 347 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 MRGPRDQ8TDS7 321 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 WDR61Q9GZS3 305 aaKnown RBP6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 IGKV3D-11A0A0A0MRZ8 115 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 GRIFINA4D1Z8 144 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 ANKUB1A6NFN9 424 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 F5H5K5 113 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 H3BML4 177 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 TRAPPC6AO75865 159 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 IGKV1D-33P01593 117 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 IGKV1-33P01594 117 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 OR5AU1Q8NGC0 362 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 KCNE4Q8WWG9 221 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 DOCK11Q5JSL3 2073 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 IGKV1-27A0A075B6S5 117 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 LOC105371242A0A075B767 164 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 A0A0G2JRQ6 117 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 TRAF3IP2O43734 574 aaPredicted RBP6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 PDCD6O75340 191 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 WNT2P09544 360 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 SLC25A6P12236 298 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 RPS18P62269 152 aaKnown RBP6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 MYBPHQ13203 477 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 CARD17Q5XLA6 110 aa6.87□□□□□ -1.31
HMGXB4-202ENST00000418170 FBXO46Q6PJ61 603 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms