RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 LYPD6Q86Y78 171 aa20.1■□□□□ 0.81
VEGFA-208ENST00000417285 LINC00311Q8N616 119 aa20.1■□□□□ 0.81
VEGFA-208ENST00000417285 CHPT1Q8WUD6 406 aa20.1■□□□□ 0.81
VEGFA-208ENST00000417285 PHF21AQ96BD5 680 aa20.1■□□□□ 0.81
VEGFA-208ENST00000417285 BANF2Q9H503 90 aa20.1■□□□□ 0.81
VEGFA-208ENST00000417285 GHRLQ9UBU3 117 aa20.1■□□□□ 0.81
VEGFA-208ENST00000417285 A0A1W2PPE3 182 aa20.09■□□□□ 0.81
VEGFA-208ENST00000417285 PSMB11A5LHX3 300 aa20.09■□□□□ 0.81
VEGFA-208ENST00000417285 CCRL2O00421 344 aa20.09■□□□□ 0.81
VEGFA-208ENST00000417285 SLC35A2P78381 396 aa20.09■□□□□ 0.81
VEGFA-208ENST00000417285 EBI3Q14213 229 aa20.09■□□□□ 0.81
VEGFA-208ENST00000417285 DIAPH2-AS1Q14236 149 aa20.09■□□□□ 0.81
VEGFA-208ENST00000417285 HNF4GQ14541 408 aa20.09■□□□□ 0.81
VEGFA-208ENST00000417285 Q3ZCU0 254 aa20.09■□□□□ 0.81
VEGFA-208ENST00000417285 ACSM3Q53FZ2 586 aa20.09■□□□□ 0.81
VEGFA-208ENST00000417285 C5orf56Q8N8D9 126 aa20.09■□□□□ 0.81
VEGFA-208ENST00000417285 GFOD1Q9NXC2 390 aa20.09■□□□□ 0.81
VEGFA-208ENST00000417285 TRAPPC2LQ9UL33 140 aa20.09■□□□□ 0.81
VEGFA-208ENST00000417285 PEX16Q9Y5Y5 336 aa20.09■□□□□ 0.81
VEGFA-208ENST00000417285 HSD17B6O14756 317 aa20.08■□□□□ 0.81
VEGFA-208ENST00000417285 CA11O75493 328 aa20.08■□□□□ 0.81
VEGFA-208ENST00000417285 DUS4LO95620 317 aaKnown RBP20.08■□□□□ 0.81
VEGFA-208ENST00000417285 IGKV1D-33P01593 117 aa20.08■□□□□ 0.81
VEGFA-208ENST00000417285 IGKV1-33P01594 117 aa20.08■□□□□ 0.81
VEGFA-208ENST00000417285 IGLL1P15814 213 aa20.08■□□□□ 0.81
VEGFA-208ENST00000417285 AQP4P55087 323 aa20.08■□□□□ 0.81
VEGFA-208ENST00000417285 GPR50Q13585 617 aa20.08■□□□□ 0.81
VEGFA-208ENST00000417285 SPHARQ15513 63 aa20.08■□□□□ 0.81
VEGFA-208ENST00000417285 C6orf183Q5T699 404 aa20.08■□□□□ 0.81
VEGFA-208ENST00000417285 SYT6Q5T7P8 510 aaPredicted RBP20.08■□□□□ 0.81
VEGFA-208ENST00000417285 UNQ9370/PRO34162Q6UXP9 181 aa20.08■□□□□ 0.81
VEGFA-208ENST00000417285 MOB3BQ86TA1 216 aa20.08■□□□□ 0.81
VEGFA-208ENST00000417285 MRAPQ8TCY5 172 aa20.08■□□□□ 0.81
VEGFA-208ENST00000417285 RCC1LQ96I51 464 aaKnown RBP20.08■□□□□ 0.81
VEGFA-208ENST00000417285 Q96M66 194 aa20.08■□□□□ 0.81
VEGFA-208ENST00000417285 TMED9Q9BVK6 235 aa20.08■□□□□ 0.81
VEGFA-208ENST00000417285 IGHV1-3A0A0C4DH29 117 aa20.07■□□□□ 0.8
VEGFA-208ENST00000417285 SPINT2O43291 252 aa20.07■□□□□ 0.8
VEGFA-208ENST00000417285 GLAP06280 429 aa20.07■□□□□ 0.8
VEGFA-208ENST00000417285 IL3RAP26951 378 aa20.07■□□□□ 0.8
VEGFA-208ENST00000417285 MED22Q15528 200 aa20.07■□□□□ 0.8
VEGFA-208ENST00000417285 TMEM30BQ3MIR4 351 aa20.07■□□□□ 0.8
VEGFA-208ENST00000417285 KHDC1LQ5JSQ8 128 aa20.07■□□□□ 0.8
VEGFA-208ENST00000417285 FOXB2Q5VYV0 432 aa20.07■□□□□ 0.8
VEGFA-208ENST00000417285 TRAT1Q6PIZ9 186 aa20.07■□□□□ 0.8
VEGFA-208ENST00000417285 C10orf99Q6UWK7 81 aa20.07■□□□□ 0.8
VEGFA-208ENST00000417285 TMEM104Q8NE00 496 aa20.07■□□□□ 0.8
VEGFA-208ENST00000417285 UBALD1Q8TB05 177 aa20.07■□□□□ 0.8
VEGFA-208ENST00000417285 CST11Q9H112 138 aa20.07■□□□□ 0.8
VEGFA-208ENST00000417285 H0YHG0 523 aa20.06■□□□□ 0.8
VEGFA-208ENST00000417285 UBBP0CG47 229 aa20.06■□□□□ 0.8
VEGFA-208ENST00000417285 FUT3P21217 361 aa20.06■□□□□ 0.8
VEGFA-208ENST00000417285 GLT8D1Q68CQ7 371 aa20.06■□□□□ 0.8
VEGFA-208ENST00000417285 GAPTQ8N292 157 aa20.06■□□□□ 0.8
VEGFA-208ENST00000417285 OR4K15Q8NH41 348 aa20.06■□□□□ 0.8
VEGFA-208ENST00000417285 NRG4Q8WWG1 115 aa20.06■□□□□ 0.8
VEGFA-208ENST00000417285 PHYHIPQ92561 330 aa20.06■□□□□ 0.8
VEGFA-208ENST00000417285 LSM2Q9Y333 95 aaKnown RBP20.06■□□□□ 0.8
VEGFA-208ENST00000417285 TPRKBQ9Y3C4 175 aa20.06■□□□□ 0.8
VEGFA-208ENST00000417285 IGHV3-43A0A0B4J1X8 118 aa20.05■□□□□ 0.8
VEGFA-208ENST00000417285 SERPINE3A8MV23 424 aa20.05■□□□□ 0.8
VEGFA-208ENST00000417285 C12orf77C9JDV5 145 aa20.05■□□□□ 0.8
VEGFA-208ENST00000417285 SC5DO75845 299 aa20.05■□□□□ 0.8
VEGFA-208ENST00000417285 IGHG2P01859 326 aa20.05■□□□□ 0.8
VEGFA-208ENST00000417285 IGHV3-43DP0DP04 118 aa20.05■□□□□ 0.8
VEGFA-208ENST00000417285 SLC6A1P30531 599 aa20.05■□□□□ 0.8
VEGFA-208ENST00000417285 SLC35B1P78383 322 aa20.05■□□□□ 0.8
VEGFA-208ENST00000417285 INSL4Q14641 139 aa20.05■□□□□ 0.8
VEGFA-208ENST00000417285 RBM48Q5RL73 367 aaKnown RBP20.05■□□□□ 0.8
VEGFA-208ENST00000417285 COMMD1Q8N668 190 aa20.05■□□□□ 0.8
VEGFA-208ENST00000417285 OR2T10Q8NGZ9 312 aa20.05■□□□□ 0.8
VEGFA-208ENST00000417285 FAM46BQ96A09 425 aa20.05■□□□□ 0.8
VEGFA-208ENST00000417285 ZFP57Q9NU63 452 aa20.05■□□□□ 0.8
VEGFA-208ENST00000417285 AURKAIP1Q9NWT8 199 aaPredicted RBP20.05■□□□□ 0.8
VEGFA-208ENST00000417285 PDCD6O75340 191 aa20.04■□□□□ 0.8
VEGFA-208ENST00000417285 CD1BP29016 333 aa20.04■□□□□ 0.8
VEGFA-208ENST00000417285 FAM27D1Q5T7N8 215 aa20.04■□□□□ 0.8
VEGFA-208ENST00000417285 STEAP3Q658P3 488 aa20.04■□□□□ 0.8
VEGFA-208ENST00000417285 ZNF329Q86UD4 541 aa20.04■□□□□ 0.8
VEGFA-208ENST00000417285 FOXRED2Q8IWF2 684 aa20.04■□□□□ 0.8
VEGFA-208ENST00000417285 IZUMO1Q8IYV9 350 aa20.04■□□□□ 0.8
VEGFA-208ENST00000417285 OR51D1Q8NGF3 324 aa20.04■□□□□ 0.8
VEGFA-208ENST00000417285 UFD1Q92890 307 aa20.04■□□□□ 0.8
VEGFA-208ENST00000417285 ST6GALNAC6Q969X2 333 aa20.04■□□□□ 0.8
VEGFA-208ENST00000417285 EAF1Q96JC9 268 aaPredicted RBP20.04■□□□□ 0.8
VEGFA-208ENST00000417285 GNG12Q9UBI6 72 aa20.04■□□□□ 0.8
VEGFA-208ENST00000417285 UBE2QL1A1L167 161 aa20.03■□□□□ 0.8
VEGFA-208ENST00000417285 NCBP2LA6PVI3 153 aaKnown RBP20.03■□□□□ 0.8
VEGFA-208ENST00000417285 MPIG6BO95866 241 aa20.03■□□□□ 0.8
VEGFA-208ENST00000417285 HBZP02008 142 aa20.03■□□□□ 0.8
VEGFA-208ENST00000417285 MYF6P23409 242 aa20.03■□□□□ 0.8
VEGFA-208ENST00000417285 VHLP40337 213 aa20.03■□□□□ 0.8
VEGFA-208ENST00000417285 REG1BP48304 166 aa20.03■□□□□ 0.8
VEGFA-208ENST00000417285 GP2P55259 537 aaKnown RBP20.03■□□□□ 0.8
VEGFA-208ENST00000417285 IRF3Q14653 427 aa20.03■□□□□ 0.8
VEGFA-208ENST00000417285 HSD17B12Q53GQ0 312 aa20.03■□□□□ 0.8
VEGFA-208ENST00000417285 CEACAM19Q7Z692 300 aa20.03■□□□□ 0.8
VEGFA-208ENST00000417285 SLC35E3Q7Z769 313 aa20.03■□□□□ 0.8
VEGFA-208ENST00000417285 LRRTM1Q86UE6 522 aa20.03■□□□□ 0.8
VEGFA-208ENST00000417285 TGIF2LXQ8IUE1 241 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms