RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 GPR107Q5VW38 600 aa18.75■□□□□ 0.59
SMARCB1-205ENST00000417137 BAIAP2L2Q6UXY1 529 aa18.75■□□□□ 0.59
SMARCB1-205ENST00000417137 NDNFQ8TB73 568 aa18.75■□□□□ 0.59
SMARCB1-205ENST00000417137 DUX5Q96PT3 197 aa18.75■□□□□ 0.59
SMARCB1-205ENST00000417137 ABRACLQ9P1F3 81 aa18.75■□□□□ 0.59
SMARCB1-205ENST00000417137 AK3Q9UIJ7 227 aa18.75■□□□□ 0.59
SMARCB1-205ENST00000417137 FBN1P35555 2871 aaKnown RBP18.74■□□□□ 0.59
SMARCB1-205ENST00000417137 C12orf77C9JDV5 145 aa18.74■□□□□ 0.59
SMARCB1-205ENST00000417137 SDCBPO00560 298 aaPredicted RBP18.74■□□□□ 0.59
SMARCB1-205ENST00000417137 RNASE1P07998 156 aaKnown RBP18.74■□□□□ 0.59
SMARCB1-205ENST00000417137 SERPINB10P48595 397 aa18.74■□□□□ 0.59
SMARCB1-205ENST00000417137 VBP1P61758 197 aa18.74■□□□□ 0.59
SMARCB1-205ENST00000417137 AANATQ16613 207 aa18.74■□□□□ 0.59
SMARCB1-205ENST00000417137 MOB1BQ7L9L4 216 aa18.74■□□□□ 0.59
SMARCB1-205ENST00000417137 LHFPL4Q7Z7J7 247 aa18.74■□□□□ 0.59
SMARCB1-205ENST00000417137 LGALS14Q8TCE9 139 aa18.74■□□□□ 0.59
SMARCB1-205ENST00000417137 PHF21AQ96BD5 680 aa18.74■□□□□ 0.59
SMARCB1-205ENST00000417137 CMSS1Q9BQ75 279 aaKnown RBP18.74■□□□□ 0.59
SMARCB1-205ENST00000417137 TAF9BQ9HBM6 251 aa18.74■□□□□ 0.59
SMARCB1-205ENST00000417137 ZNF286AQ9HBT8 521 aa18.74■□□□□ 0.59
SMARCB1-205ENST00000417137 MGAT4AQ9UM21 535 aa18.74■□□□□ 0.59
SMARCB1-205ENST00000417137 KIAA2026Q5HYC2 2103 aa18.73■□□□□ 0.59
SMARCB1-205ENST00000417137 STAB1Q9NY15 2570 aa18.73■□□□□ 0.59
SMARCB1-205ENST00000417137 TRBV6-6A0A0A6YYG2 114 aa18.73■□□□□ 0.59
SMARCB1-205ENST00000417137 FAM172BPA6NC97 362 aa18.73■□□□□ 0.59
SMARCB1-205ENST00000417137 RAB27BO00194 218 aa18.73■□□□□ 0.59
SMARCB1-205ENST00000417137 F2RL2O00254 374 aa18.73■□□□□ 0.59
SMARCB1-205ENST00000417137 NAPSAO96009 420 aa18.73■□□□□ 0.59
SMARCB1-205ENST00000417137 HBZP02008 142 aa18.73■□□□□ 0.59
SMARCB1-205ENST00000417137 CEACAM3P40198 252 aa18.73■□□□□ 0.59
SMARCB1-205ENST00000417137 RPL5P46777 297 aaKnown RBP18.73■□□□□ 0.59
SMARCB1-205ENST00000417137 NCS1P62166 190 aa18.73■□□□□ 0.59
SMARCB1-205ENST00000417137 KRTAP24-1Q3LI83 254 aa18.73■□□□□ 0.59
SMARCB1-205ENST00000417137 PLAC9Q5JTB6 97 aa18.73■□□□□ 0.59
SMARCB1-205ENST00000417137 C16orf87Q6PH81 154 aa18.73■□□□□ 0.59
SMARCB1-205ENST00000417137 PRR18Q8N4B5 295 aa18.73■□□□□ 0.59
SMARCB1-205ENST00000417137 OR5R1Q8NH85 324 aa18.73■□□□□ 0.59
SMARCB1-205ENST00000417137 C17orf50Q8WW18 174 aa18.73■□□□□ 0.59
SMARCB1-205ENST00000417137 AJUBAQ96IF1 538 aa18.73■□□□□ 0.59
SMARCB1-205ENST00000417137 C12orf4Q9NQ89 552 aa18.73■□□□□ 0.59
SMARCB1-205ENST00000417137 DPM3Q9P2X0 92 aa18.73■□□□□ 0.59
SMARCB1-205ENST00000417137 SERPINE3A8MV23 424 aa18.72■□□□□ 0.59
SMARCB1-205ENST00000417137 LEUTXA8MZ59 168 aa18.72■□□□□ 0.59
SMARCB1-205ENST00000417137 GABARAPO95166 117 aa18.72■□□□□ 0.59
SMARCB1-205ENST00000417137 IGLV1-47P01700 117 aa18.72■□□□□ 0.59
SMARCB1-205ENST00000417137 CD3GP09693 182 aa18.72■□□□□ 0.59
SMARCB1-205ENST00000417137 SSX2Q16385 188 aa18.72■□□□□ 0.59
SMARCB1-205ENST00000417137 HLA-DRB5Q30154 266 aa18.72■□□□□ 0.59
SMARCB1-205ENST00000417137 MOGAT2Q3SYC2 334 aa18.72■□□□□ 0.59
SMARCB1-205ENST00000417137 OR4P4Q8NGL7 312 aa18.72■□□□□ 0.59
SMARCB1-205ENST00000417137 SETD6Q8TBK2 473 aa18.72■□□□□ 0.59
SMARCB1-205ENST00000417137 SLC25A46Q96AG3 418 aa18.72■□□□□ 0.59
SMARCB1-205ENST00000417137 GALMQ96C23 342 aa18.72■□□□□ 0.59
SMARCB1-205ENST00000417137 SSX3Q99909 188 aa18.72■□□□□ 0.59
SMARCB1-205ENST00000417137 TNFRSF19Q9NS68 423 aa18.72■□□□□ 0.59
SMARCB1-205ENST00000417137 GFOD1Q9NXC2 390 aa18.72■□□□□ 0.59
SMARCB1-205ENST00000417137 SCOCQ9UIL1 159 aa18.72■□□□□ 0.59
SMARCB1-205ENST00000417137 SPATA2Q9UM82 520 aa18.72■□□□□ 0.59
SMARCB1-205ENST00000417137 PSG11Q9UQ72 335 aa18.72■□□□□ 0.59
SMARCB1-205ENST00000417137 AMMECR1Q9Y4X0 333 aaPredicted RBP18.72■□□□□ 0.59
SMARCB1-205ENST00000417137 CUBNO60494 3623 aa18.72■□□□□ 0.59
SMARCB1-205ENST00000417137 J3QR06 171 aa18.71■□□□□ 0.59
SMARCB1-205ENST00000417137 IGHV4-59P01825 116 aa18.71■□□□□ 0.59
SMARCB1-205ENST00000417137 HIST1H1DP16402 221 aaKnown RBP18.71■□□□□ 0.59
SMARCB1-205ENST00000417137 LRRC75BQ2VPJ9 315 aa18.71■□□□□ 0.59
SMARCB1-205ENST00000417137 Q3ZCU0 254 aa18.71■□□□□ 0.59
SMARCB1-205ENST00000417137 ZNF880Q6PDB4 577 aa18.71■□□□□ 0.59
SMARCB1-205ENST00000417137 UBALD1Q8TB05 177 aa18.71■□□□□ 0.59
SMARCB1-205ENST00000417137 MMP28Q9H239 520 aa18.71■□□□□ 0.59
SMARCB1-205ENST00000417137 RHBDL2Q9NX52 303 aa18.71■□□□□ 0.59
SMARCB1-205ENST00000417137 GNG12Q9UBI6 72 aa18.71■□□□□ 0.59
SMARCB1-205ENST00000417137 BUB1B-PAK6H3BSN5 160 aa18.7■□□□□ 0.58
SMARCB1-205ENST00000417137 GNB3P16520 340 aa18.7■□□□□ 0.58
SMARCB1-205ENST00000417137 ARHGDIBP52566 201 aa18.7■□□□□ 0.58
SMARCB1-205ENST00000417137 LOXL3P58215 753 aa18.7■□□□□ 0.58
SMARCB1-205ENST00000417137 CTF1Q16619 201 aa18.7■□□□□ 0.58
SMARCB1-205ENST00000417137 OR1L1Q8NH94 360 aa18.7■□□□□ 0.58
SMARCB1-205ENST00000417137 LEAP2Q969E1 77 aa18.7■□□□□ 0.58
SMARCB1-205ENST00000417137 KCTD12Q96CX2 325 aaKnown RBP18.7■□□□□ 0.58
SMARCB1-205ENST00000417137 CYYR1Q96J86 154 aa18.7■□□□□ 0.58
SMARCB1-205ENST00000417137 C19orf24Q9BVV8 132 aa18.7■□□□□ 0.58
SMARCB1-205ENST00000417137 NAA50Q9GZZ1 169 aaKnown RBP18.7■□□□□ 0.58
SMARCB1-205ENST00000417137 OR2S2Q9NQN1 319 aa18.7■□□□□ 0.58
SMARCB1-205ENST00000417137 ABCB10Q9NRK6 738 aa18.7■□□□□ 0.58
SMARCB1-205ENST00000417137 HILPDAQ9Y5L2 63 aa18.7■□□□□ 0.58
SMARCB1-205ENST00000417137 A0A075B6Q4 140 aa18.69■□□□□ 0.58
SMARCB1-205ENST00000417137 VGLL3A8MV65 326 aa18.69■□□□□ 0.58
SMARCB1-205ENST00000417137 IGHV3-7P01780 117 aa18.69■□□□□ 0.58
SMARCB1-205ENST00000417137 CRYBA1P05813 215 aa18.69■□□□□ 0.58
SMARCB1-205ENST00000417137 HTD2P86397 168 aa18.69■□□□□ 0.58
SMARCB1-205ENST00000417137 HMGN3Q15651 99 aa18.69■□□□□ 0.58
SMARCB1-205ENST00000417137 CDNFQ49AH0 187 aa18.69■□□□□ 0.58
SMARCB1-205ENST00000417137 C8orf31Q8N9H6 132 aa18.69■□□□□ 0.58
SMARCB1-205ENST00000417137 OR5H6Q8NGV6 325 aa18.69■□□□□ 0.58
SMARCB1-205ENST00000417137 HDHD3Q9BSH5 251 aaPredicted RBP18.69■□□□□ 0.58
SMARCB1-205ENST00000417137 CHIAQ9BZP6 476 aa18.69■□□□□ 0.58
SMARCB1-205ENST00000417137 KCNK7Q9Y2U2 307 aa18.69■□□□□ 0.58
SMARCB1-205ENST00000417137 A0A0A6YYH2 397 aa18.68■□□□□ 0.58
SMARCB1-205ENST00000417137 IGHV3-43A0A0B4J1X8 118 aa18.68■□□□□ 0.58
SMARCB1-205ENST00000417137 A6NJ64 397 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms