RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 ABCG5Q9H222 651 aa17.16■□□□□ 0.34
ACTB-203ENST00000417101 CHCHD3Q9NX63 227 aaKnown RBP17.16■□□□□ 0.34
ACTB-203ENST00000417101 C12orf77C9JDV5 145 aa17.15■□□□□ 0.34
ACTB-203ENST00000417101 SLC31A2O15432 143 aa17.15■□□□□ 0.34
ACTB-203ENST00000417101 GPX5O75715 221 aa17.15■□□□□ 0.34
ACTB-203ENST00000417101 RPS11P62280 158 aaKnown RBP eCLIP17.15■□□□□ 0.34
ACTB-203ENST00000417101 GPR176Q14439 515 aa17.15■□□□□ 0.34
ACTB-203ENST00000417101 TEX38Q6PEX7 206 aa17.15■□□□□ 0.34
ACTB-203ENST00000417101 JAGN1Q8N5M9 183 aa17.15■□□□□ 0.34
ACTB-203ENST00000417101 Q8N9W7 124 aa17.15■□□□□ 0.34
ACTB-203ENST00000417101 TMEM104Q8NE00 496 aa17.15■□□□□ 0.34
ACTB-203ENST00000417101 CYGBQ8WWM9 190 aa17.15■□□□□ 0.34
ACTB-203ENST00000417101 MUL1Q969V5 352 aa17.15■□□□□ 0.34
ACTB-203ENST00000417101 TMEM80Q96HE8 168 aa17.15■□□□□ 0.34
ACTB-203ENST00000417101 DUX3Q96PT4 197 aa17.15■□□□□ 0.34
ACTB-203ENST00000417101 SPACA1Q9HBV2 294 aa17.15■□□□□ 0.34
ACTB-203ENST00000417101 LIN7CQ9NUP9 197 aaKnown RBP17.15■□□□□ 0.34
ACTB-203ENST00000417101 RCC2Q9P258 522 aaKnown RBP17.15■□□□□ 0.34
ACTB-203ENST00000417101 TRAPPC2LQ9UL33 140 aa17.15■□□□□ 0.34
ACTB-203ENST00000417101 MRPS28Q9Y2Q9 187 aaKnown RBP17.15■□□□□ 0.34
ACTB-203ENST00000417101 A0A1W2PPK0 400 aa17.14■□□□□ 0.33
ACTB-203ENST00000417101 ZNF736B4DX44 427 aaPredicted RBP17.14■□□□□ 0.33
ACTB-203ENST00000417101 MCRIP1C9JLW8 97 aa17.14■□□□□ 0.33
ACTB-203ENST00000417101 CD1BP29016 333 aa17.14■□□□□ 0.33
ACTB-203ENST00000417101 MED21Q13503 144 aa17.14■□□□□ 0.33
ACTB-203ENST00000417101 YIF1BQ5BJH7 314 aa17.14■□□□□ 0.33
ACTB-203ENST00000417101 SYT6Q5T7P8 510 aaPredicted RBP17.14■□□□□ 0.33
ACTB-203ENST00000417101 GLIPR1L1Q6UWM5 242 aa17.14■□□□□ 0.33
ACTB-203ENST00000417101 OR4K15Q8NH41 348 aa17.14■□□□□ 0.33
ACTB-203ENST00000417101 PLSCR3Q9NRY6 295 aa17.14■□□□□ 0.33
ACTB-203ENST00000417101 ETAA1Q9NY74 926 aa17.14■□□□□ 0.33
ACTB-203ENST00000417101 GNG12Q9UBI6 72 aa17.14■□□□□ 0.33
ACTB-203ENST00000417101 KMT2CQ8NEZ4 4911 aaKnown RBP17.14■□□□□ 0.33
ACTB-203ENST00000417101 SPINT2O43291 252 aa17.13■□□□□ 0.33
ACTB-203ENST00000417101 MOSP00540 346 aa17.13■□□□□ 0.33
ACTB-203ENST00000417101 RPLP1P05386 114 aaKnown RBP17.13■□□□□ 0.33
ACTB-203ENST00000417101 FSTP19883 344 aa17.13■□□□□ 0.33
ACTB-203ENST00000417101 RAB25P57735 213 aa17.13■□□□□ 0.33
ACTB-203ENST00000417101 PNLIPRP3Q17RR3 467 aa17.13■□□□□ 0.33
ACTB-203ENST00000417101 LRRC36Q1X8D7 754 aa17.13■□□□□ 0.33
ACTB-203ENST00000417101 Q3ZCU0 254 aa17.13■□□□□ 0.33
ACTB-203ENST00000417101 RAB12Q6IQ22 244 aa17.13■□□□□ 0.33
ACTB-203ENST00000417101 LCNL1Q6ZST4 164 aa17.13■□□□□ 0.33
ACTB-203ENST00000417101 SLC25A48Q6ZT89 311 aaKnown RBP17.13■□□□□ 0.33
ACTB-203ENST00000417101 PRR18Q8N4B5 295 aa17.13■□□□□ 0.33
ACTB-203ENST00000417101 ZNF485Q8NCK3 441 aa17.13■□□□□ 0.33
ACTB-203ENST00000417101 ZNF439Q8NDP4 499 aa17.13■□□□□ 0.33
ACTB-203ENST00000417101 OR10V1Q8NGI7 309 aa17.13■□□□□ 0.33
ACTB-203ENST00000417101 RBMXL1Q96E39 390 aaKnown RBP17.13■□□□□ 0.33
ACTB-203ENST00000417101 RAX2Q96IS3 184 aa17.13■□□□□ 0.33
ACTB-203ENST00000417101 PGLYRP3Q96LB9 341 aa17.13■□□□□ 0.33
ACTB-203ENST00000417101 OR14A2Q96R54 314 aa17.13■□□□□ 0.33
ACTB-203ENST00000417101 S1PR3Q99500 378 aa17.13■□□□□ 0.33
ACTB-203ENST00000417101 TRBV5-7A0A0A0MS05 114 aa17.12■□□□□ 0.33
ACTB-203ENST00000417101 PNMA8CA0A1B0GUJ8 204 aa17.12■□□□□ 0.33
ACTB-203ENST00000417101 CCL24O00175 119 aa17.12■□□□□ 0.33
ACTB-203ENST00000417101 HBZP02008 142 aa17.12■□□□□ 0.33
ACTB-203ENST00000417101 CD69Q07108 199 aa17.12■□□□□ 0.33
ACTB-203ENST00000417101 GPR50Q13585 617 aa17.12■□□□□ 0.33
ACTB-203ENST00000417101 CT45A1Q5HYN5 189 aa17.12■□□□□ 0.33
ACTB-203ENST00000417101 OR1L1Q8NH94 360 aa17.12■□□□□ 0.33
ACTB-203ENST00000417101 CT45A3Q8NHU0 189 aa17.12■□□□□ 0.33
ACTB-203ENST00000417101 MRPS24Q96EL2 167 aaKnown RBP17.12■□□□□ 0.33
ACTB-203ENST00000417101 RASL11BQ9BPW5 248 aa17.12■□□□□ 0.33
ACTB-203ENST00000417101 GON7Q9BXV9 100 aa17.12■□□□□ 0.33
ACTB-203ENST00000417101 BANF2Q9H503 90 aa17.12■□□□□ 0.33
ACTB-203ENST00000417101 DCLRE1BQ9H816 532 aa17.12■□□□□ 0.33
ACTB-203ENST00000417101 RAB9BQ9NP90 201 aa17.12■□□□□ 0.33
ACTB-203ENST00000417101 PEX16Q9Y5Y5 336 aa17.12■□□□□ 0.33
ACTB-203ENST00000417101 H0YHG0 523 aa17.11■□□□□ 0.33
ACTB-203ENST00000417101 TXNL1O43396 289 aa17.11■□□□□ 0.33
ACTB-203ENST00000417101 ZNF134P52741 427 aa17.11■□□□□ 0.33
ACTB-203ENST00000417101 ZNF137PP52743 207 aa17.11■□□□□ 0.33
ACTB-203ENST00000417101 ST3GAL4Q11206 333 aa17.11■□□□□ 0.33
ACTB-203ENST00000417101 CXorf66Q5JRM2 361 aaPredicted RBP17.11■□□□□ 0.33
ACTB-203ENST00000417101 C6orf183Q5T699 404 aa17.11■□□□□ 0.33
ACTB-203ENST00000417101 TTC23Q5W5X9 447 aa17.11■□□□□ 0.33
ACTB-203ENST00000417101 AWAT2Q6E213 333 aa17.11■□□□□ 0.33
ACTB-203ENST00000417101 UNQ9370/PRO34162Q6UXP9 181 aa17.11■□□□□ 0.33
ACTB-203ENST00000417101 OR8H1Q8NGG4 311 aa17.11■□□□□ 0.33
ACTB-203ENST00000417101 GGHQ92820 318 aa17.11■□□□□ 0.33
ACTB-203ENST00000417101 SELENOIQ9C0D9 397 aa17.11■□□□□ 0.33
ACTB-203ENST00000417101 TENM3Q9P273 2699 aa17.11■□□□□ 0.33
ACTB-203ENST00000417101 MAS1P04201 325 aa17.1■□□□□ 0.33
ACTB-203ENST00000417101 RCC1P18754 421 aaPredicted RBP17.1■□□□□ 0.33
ACTB-203ENST00000417101 F2RL1P55085 397 aa17.1■□□□□ 0.33
ACTB-203ENST00000417101 FOXE3Q13461 319 aa17.1■□□□□ 0.33
ACTB-203ENST00000417101 DEFB136Q30KP8 78 aa17.1■□□□□ 0.33
ACTB-203ENST00000417101 TMEM30BQ3MIR4 351 aa17.1■□□□□ 0.33
ACTB-203ENST00000417101 GAPTQ8N292 157 aa17.1■□□□□ 0.33
ACTB-203ENST00000417101 SETD9Q8NE22 299 aa17.1■□□□□ 0.33
ACTB-203ENST00000417101 B9D2Q9BPU9 175 aa17.1■□□□□ 0.33
ACTB-203ENST00000417101 HSPB9Q9BQS6 159 aa17.1■□□□□ 0.33
ACTB-203ENST00000417101 EBAG9O00559 213 aa17.09■□□□□ 0.33
ACTB-203ENST00000417101 RRP9O43818 475 aaKnown RBP17.09■□□□□ 0.33
ACTB-203ENST00000417101 CRTAPO75718 401 aaPredicted RBP17.09■□□□□ 0.33
ACTB-203ENST00000417101 MGMTP16455 207 aa17.09■□□□□ 0.33
ACTB-203ENST00000417101 VHLP40337 213 aa17.09■□□□□ 0.33
ACTB-203ENST00000417101 TRAT1Q6PIZ9 186 aa17.09■□□□□ 0.33
ACTB-203ENST00000417101 CDH26Q8IXH8 852 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms