RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 FBLIM1Q8WUP2 373 aa13.93□□□□□ -0.18
PDLIM2-208ENST00000416159 RCC1LQ96I51 464 aaKnown RBP13.93□□□□□ -0.18
PDLIM2-208ENST00000416159 AURKAIP1Q9NWT8 199 aaPredicted RBP13.93□□□□□ -0.18
PDLIM2-208ENST00000416159 ETAA1Q9NY74 926 aa13.93□□□□□ -0.18
PDLIM2-208ENST00000416159 IGHV3-43A0A0B4J1X8 118 aa13.92□□□□□ -0.18
PDLIM2-208ENST00000416159 SERPINE3A8MV23 424 aa13.92□□□□□ -0.18
PDLIM2-208ENST00000416159 CA11O75493 328 aa13.92□□□□□ -0.18
PDLIM2-208ENST00000416159 DUS4LO95620 317 aaKnown RBP13.92□□□□□ -0.18
PDLIM2-208ENST00000416159 IGHG2P01859 326 aa13.92□□□□□ -0.18
PDLIM2-208ENST00000416159 GLAP06280 429 aa13.92□□□□□ -0.18
PDLIM2-208ENST00000416159 GNAO1P09471 354 aa13.92□□□□□ -0.18
PDLIM2-208ENST00000416159 IGHV3-43DP0DP04 118 aa13.92□□□□□ -0.18
PDLIM2-208ENST00000416159 MAPK3P27361 379 aaPredicted RBP13.92□□□□□ -0.18
PDLIM2-208ENST00000416159 REG1BP48304 166 aa13.92□□□□□ -0.18
PDLIM2-208ENST00000416159 SYT6Q5T7P8 510 aaPredicted RBP13.92□□□□□ -0.18
PDLIM2-208ENST00000416159 OGFRL1Q5TC84 451 aaPredicted RBP13.92□□□□□ -0.18
PDLIM2-208ENST00000416159 RAB12Q6IQ22 244 aa13.92□□□□□ -0.18
PDLIM2-208ENST00000416159 TRAT1Q6PIZ9 186 aa13.92□□□□□ -0.18
PDLIM2-208ENST00000416159 AHSA2Q719I0 299 aa13.92□□□□□ -0.18
PDLIM2-208ENST00000416159 SLC35E3Q7Z769 313 aa13.92□□□□□ -0.18
PDLIM2-208ENST00000416159 ZNF329Q86UD4 541 aa13.92□□□□□ -0.18
PDLIM2-208ENST00000416159 IZUMO1Q8IYV9 350 aa13.92□□□□□ -0.18
PDLIM2-208ENST00000416159 COMMD1Q8N668 190 aa13.92□□□□□ -0.18
PDLIM2-208ENST00000416159 NANOGP1Q8N7R0 232 aa13.92□□□□□ -0.18
PDLIM2-208ENST00000416159 NKAIN3Q8N8D7 197 aa13.92□□□□□ -0.18
PDLIM2-208ENST00000416159 BPIFB6Q8NFQ5 453 aa13.92□□□□□ -0.18
PDLIM2-208ENST00000416159 OR2T10Q8NGZ9 312 aa13.92□□□□□ -0.18
PDLIM2-208ENST00000416159 OR4K15Q8NH41 348 aa13.92□□□□□ -0.18
PDLIM2-208ENST00000416159 ST6GALNAC6Q969X2 333 aa13.92□□□□□ -0.18
PDLIM2-208ENST00000416159 EAF1Q96JC9 268 aaPredicted RBP13.92□□□□□ -0.18
PDLIM2-208ENST00000416159 BANF2Q9H503 90 aa13.92□□□□□ -0.18
PDLIM2-208ENST00000416159 ERGIC3Q9Y282 383 aa13.92□□□□□ -0.18
PDLIM2-208ENST00000416159 PEX16Q9Y5Y5 336 aa13.92□□□□□ -0.18
PDLIM2-208ENST00000416159 IGHV3-72A0A0B4J1Y9 119 aa13.91□□□□□ -0.18
PDLIM2-208ENST00000416159 C12orf77C9JDV5 145 aa13.91□□□□□ -0.18
PDLIM2-208ENST00000416159 CASQ2O14958 399 aaPredicted RBP13.91□□□□□ -0.18
PDLIM2-208ENST00000416159 MGMTP16455 207 aa13.91□□□□□ -0.18
PDLIM2-208ENST00000416159 FUT3P21217 361 aa13.91□□□□□ -0.18
PDLIM2-208ENST00000416159 CD1BP29016 333 aa13.91□□□□□ -0.18
PDLIM2-208ENST00000416159 SLC35B1P78383 322 aa13.91□□□□□ -0.18
PDLIM2-208ENST00000416159 LYPD6Q86Y78 171 aa13.91□□□□□ -0.18
PDLIM2-208ENST00000416159 TGIF2LXQ8IUE1 241 aa13.91□□□□□ -0.18
PDLIM2-208ENST00000416159 FOXRED2Q8IWF2 684 aa13.91□□□□□ -0.18
PDLIM2-208ENST00000416159 GAPTQ8N292 157 aa13.91□□□□□ -0.18
PDLIM2-208ENST00000416159 OR51D1Q8NGF3 324 aa13.91□□□□□ -0.18
PDLIM2-208ENST00000416159 NOL4LQ96MY1 436 aaPredicted RBP13.91□□□□□ -0.18
PDLIM2-208ENST00000416159 UQCC2Q9BRT2 126 aa13.91□□□□□ -0.18
PDLIM2-208ENST00000416159 SELENOIQ9C0D9 397 aa13.91□□□□□ -0.18
PDLIM2-208ENST00000416159 ZFP57Q9NU63 452 aa13.91□□□□□ -0.18
PDLIM2-208ENST00000416159 GNG12Q9UBI6 72 aa13.91□□□□□ -0.18
PDLIM2-208ENST00000416159 GHRLQ9UBU3 117 aa13.91□□□□□ -0.18
PDLIM2-208ENST00000416159 NCBP2LA6PVI3 153 aaKnown RBP13.9□□□□□ -0.18
PDLIM2-208ENST00000416159 TXNL1O43396 289 aa13.9□□□□□ -0.18
PDLIM2-208ENST00000416159 CRTAPO75718 401 aaPredicted RBP13.9□□□□□ -0.18
PDLIM2-208ENST00000416159 RPL23AP62750 156 aaKnown RBP13.9□□□□□ -0.18
PDLIM2-208ENST00000416159 FAM53AQ6NSI3 398 aaPredicted RBP13.9□□□□□ -0.18
PDLIM2-208ENST00000416159 SLC25A48Q6ZT89 311 aaKnown RBP13.9□□□□□ -0.18
PDLIM2-208ENST00000416159 Q8N6K4 173 aa13.9□□□□□ -0.18
PDLIM2-208ENST00000416159 RTN4IP1Q8WWV3 396 aaPredicted RBP13.9□□□□□ -0.18
PDLIM2-208ENST00000416159 Q96M66 194 aa13.9□□□□□ -0.18
PDLIM2-208ENST00000416159 VCXQ9H320 206 aa13.9□□□□□ -0.18
PDLIM2-208ENST00000416159 LIN7CQ9NUP9 197 aaKnown RBP13.9□□□□□ -0.18
PDLIM2-208ENST00000416159 FKBP14Q9NWM8 211 aa13.9□□□□□ -0.18
PDLIM2-208ENST00000416159 SC5DO75845 299 aa13.89□□□□□ -0.19
PDLIM2-208ENST00000416159 HBZP02008 142 aa13.89□□□□□ -0.19
PDLIM2-208ENST00000416159 SLC6A1P30531 599 aa13.89□□□□□ -0.19
PDLIM2-208ENST00000416159 ZNF137PP52743 207 aa13.89□□□□□ -0.19
PDLIM2-208ENST00000416159 RNLSQ5VYX0 342 aa13.89□□□□□ -0.19
PDLIM2-208ENST00000416159 STEAP3Q658P3 488 aa13.89□□□□□ -0.19
PDLIM2-208ENST00000416159 STPG2Q8N412 459 aa13.89□□□□□ -0.19
PDLIM2-208ENST00000416159 MS4A15Q8N5U1 240 aa13.89□□□□□ -0.19
PDLIM2-208ENST00000416159 ZNF439Q8NDP4 499 aa13.89□□□□□ -0.19
PDLIM2-208ENST00000416159 TMEM104Q8NE00 496 aa13.89□□□□□ -0.19
PDLIM2-208ENST00000416159 ABCG5Q9H222 651 aa13.89□□□□□ -0.19
PDLIM2-208ENST00000416159 KCNIP1Q9NZI2 227 aa13.89□□□□□ -0.19
PDLIM2-208ENST00000416159 LINC00527Q9UJ94 153 aa13.89□□□□□ -0.19
PDLIM2-208ENST00000416159 UBE2QL1A1L167 161 aa13.88□□□□□ -0.19
PDLIM2-208ENST00000416159 AP4M1O00189 453 aa13.88□□□□□ -0.19
PDLIM2-208ENST00000416159 SLC31A2O15432 143 aa13.88□□□□□ -0.19
PDLIM2-208ENST00000416159 MOSP00540 346 aa13.88□□□□□ -0.19
PDLIM2-208ENST00000416159 ZNF134P52741 427 aa13.88□□□□□ -0.19
PDLIM2-208ENST00000416159 GPR50Q13585 617 aa13.88□□□□□ -0.19
PDLIM2-208ENST00000416159 CT45A1Q5HYN5 189 aa13.88□□□□□ -0.19
PDLIM2-208ENST00000416159 SIGIRRQ6IA17 410 aa13.88□□□□□ -0.19
PDLIM2-208ENST00000416159 UNQ9370/PRO34162Q6UXP9 181 aa13.88□□□□□ -0.19
PDLIM2-208ENST00000416159 OR2W3Q7Z3T1 314 aa13.88□□□□□ -0.19
PDLIM2-208ENST00000416159 ZNF554Q86TJ5 538 aa13.88□□□□□ -0.19
PDLIM2-208ENST00000416159 PRR18Q8N4B5 295 aa13.88□□□□□ -0.19
PDLIM2-208ENST00000416159 LINC00482Q8N8I6 264 aa13.88□□□□□ -0.19
PDLIM2-208ENST00000416159 Q8N9W7 124 aa13.88□□□□□ -0.19
PDLIM2-208ENST00000416159 OR8H1Q8NGG4 311 aa13.88□□□□□ -0.19
PDLIM2-208ENST00000416159 OR10V1Q8NGI7 309 aa13.88□□□□□ -0.19
PDLIM2-208ENST00000416159 OR1L1Q8NH94 360 aa13.88□□□□□ -0.19
PDLIM2-208ENST00000416159 CT45A3Q8NHU0 189 aa13.88□□□□□ -0.19
PDLIM2-208ENST00000416159 TFAP2CQ92754 450 aa13.88□□□□□ -0.19
PDLIM2-208ENST00000416159 GON7Q9BXV9 100 aa13.88□□□□□ -0.19
PDLIM2-208ENST00000416159 GPR61Q9BZJ8 451 aa13.88□□□□□ -0.19
PDLIM2-208ENST00000416159 CST11Q9H112 138 aa13.88□□□□□ -0.19
PDLIM2-208ENST00000416159 TAF9BQ9HBM6 251 aa13.88□□□□□ -0.19
PDLIM2-208ENST00000416159 PDCD6O75340 191 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms