RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 CREB3L1Q96BA8 519 aa16.69■□□□□ 0.26
PTPRU-203ENST00000415600 ZNF488Q96MN9 340 aa16.69■□□□□ 0.26
PTPRU-203ENST00000415600 CST11Q9H112 138 aa16.69■□□□□ 0.26
PTPRU-203ENST00000415600 LPAR5Q9H1C0 372 aa16.69■□□□□ 0.26
PTPRU-203ENST00000415600 HRASLSQ9HDD0 168 aa16.69■□□□□ 0.26
PTPRU-203ENST00000415600 C19orf12Q9NSK7 152 aa16.69■□□□□ 0.26
PTPRU-203ENST00000415600 TAS2R8Q9NYW2 309 aa16.69■□□□□ 0.26
PTPRU-203ENST00000415600 ZP1P60852 638 aa16.68■□□□□ 0.26
PTPRU-203ENST00000415600 RSBN1Q5VWQ0 802 aaPredicted RBP16.68■□□□□ 0.26
PTPRU-203ENST00000415600 Q8IYB0 196 aa16.68■□□□□ 0.26
PTPRU-203ENST00000415600 BORCS8Q96FH0 119 aa16.68■□□□□ 0.26
PTPRU-203ENST00000415600 TMEM59Q9BXS4 323 aa16.68■□□□□ 0.26
PTPRU-203ENST00000415600 COPZ2Q9P299 210 aa16.68■□□□□ 0.26
PTPRU-203ENST00000415600 TSPAN9O75954 239 aa16.68■□□□□ 0.26
PTPRU-203ENST00000415600 MPIG6BO95866 241 aa16.68■□□□□ 0.26
PTPRU-203ENST00000415600 TK1P04183 234 aa16.68■□□□□ 0.26
PTPRU-203ENST00000415600 LPLP06858 475 aa16.68■□□□□ 0.26
PTPRU-203ENST00000415600 RBP2P50120 134 aa16.68■□□□□ 0.26
PTPRU-203ENST00000415600 MTCP1P56278 107 aa16.68■□□□□ 0.26
PTPRU-203ENST00000415600 LRRC75BQ2VPJ9 315 aa16.68■□□□□ 0.26
PTPRU-203ENST00000415600 ZNF260Q3ZCT1 412 aa16.68■□□□□ 0.26
PTPRU-203ENST00000415600 Q6ZSV7 163 aa16.68■□□□□ 0.26
PTPRU-203ENST00000415600 ASCC1Q8N9N2 400 aaKnown RBP16.68■□□□□ 0.26
PTPRU-203ENST00000415600 TMEM104Q8NE00 496 aa16.68■□□□□ 0.26
PTPRU-203ENST00000415600 OR5D18Q8NGL1 313 aa16.68■□□□□ 0.26
PTPRU-203ENST00000415600 OR10R2Q8NGX6 335 aa16.68■□□□□ 0.26
PTPRU-203ENST00000415600 S100A13Q99584 98 aa16.68■□□□□ 0.26
PTPRU-203ENST00000415600 SSX3Q99909 188 aa16.68■□□□□ 0.26
PTPRU-203ENST00000415600 URM1Q9BTM9 101 aaKnown RBP16.68■□□□□ 0.26
PTPRU-203ENST00000415600 HES4Q9HCC6 221 aa16.68■□□□□ 0.26
PTPRU-203ENST00000415600 ING4Q9UNL4 249 aa16.68■□□□□ 0.26
PTPRU-203ENST00000415600 MT-ND4P03905 459 aa16.67■□□□□ 0.26
PTPRU-203ENST00000415600 CSF1P09603 554 aa16.67■□□□□ 0.26
PTPRU-203ENST00000415600 VEGFCP49767 419 aa16.67■□□□□ 0.26
PTPRU-203ENST00000415600 DLX1P56177 255 aa16.67■□□□□ 0.26
PTPRU-203ENST00000415600 PROK1P58294 105 aa16.67■□□□□ 0.26
PTPRU-203ENST00000415600 ACTBP60709 375 aa16.67■□□□□ 0.26
PTPRU-203ENST00000415600 TMEM200BQ69YZ2 307 aa16.67■□□□□ 0.26
PTPRU-203ENST00000415600 C11orf88Q6PI97 169 aa16.67■□□□□ 0.26
PTPRU-203ENST00000415600 LIAT1Q6ZQX7 453 aa16.67■□□□□ 0.26
PTPRU-203ENST00000415600 PNKDQ8N490 385 aa16.67■□□□□ 0.26
PTPRU-203ENST00000415600 NUBP2Q9Y5Y2 271 aa16.67■□□□□ 0.26
PTPRU-203ENST00000415600 IGKV1-27A0A075B6S5 117 aa16.66■□□□□ 0.26
PTPRU-203ENST00000415600 A0A0A6YYD4 124 aa16.66■□□□□ 0.26
PTPRU-203ENST00000415600 WIPF1O43516 503 aa16.66■□□□□ 0.26
PTPRU-203ENST00000415600 CRTAPO75718 401 aaPredicted RBP16.66■□□□□ 0.26
PTPRU-203ENST00000415600 HNRNPCP07910 306 aaKnown RBP eCLIP16.66■□□□□ 0.26
PTPRU-203ENST00000415600 ATP1B3P54709 279 aa16.66■□□□□ 0.26
PTPRU-203ENST00000415600 RPS27AP62979 156 aaKnown RBP16.66■□□□□ 0.26
PTPRU-203ENST00000415600 SLC22A6Q4U2R8 563 aa16.66■□□□□ 0.26
PTPRU-203ENST00000415600 MKXQ8IYA7 352 aa16.66■□□□□ 0.26
PTPRU-203ENST00000415600 OR4C13Q8NGP0 309 aa16.66■□□□□ 0.26
PTPRU-203ENST00000415600 MEGF9Q9H1U4 602 aa16.66■□□□□ 0.26
PTPRU-203ENST00000415600 PPA2Q9H2U2 334 aa16.66■□□□□ 0.26
PTPRU-203ENST00000415600 BANF2Q9H503 90 aa16.66■□□□□ 0.26
PTPRU-203ENST00000415600 GLS2Q9UI32 602 aa16.66■□□□□ 0.26
PTPRU-203ENST00000415600 MEGF8Q7Z7M0 2845 aa16.65■□□□□ 0.26
PTPRU-203ENST00000415600 A0A0B4J293 547 aa16.65■□□□□ 0.26
PTPRU-203ENST00000415600 A0A1W2PP11 408 aa16.65■□□□□ 0.26
PTPRU-203ENST00000415600 INMT-MINDY4F8WBC2 141 aa16.65■□□□□ 0.26
PTPRU-203ENST00000415600 H3BUX3 64 aa16.65■□□□□ 0.26
PTPRU-203ENST00000415600 K7N7A8 449 aa16.65■□□□□ 0.26
PTPRU-203ENST00000415600 TCRBP04435 133 aa16.65■□□□□ 0.26
PTPRU-203ENST00000415600 ERVK11-1P61568 191 aa16.65■□□□□ 0.26
PTPRU-203ENST00000415600 SRSF4Q08170 494 aaKnown RBP16.65■□□□□ 0.26
PTPRU-203ENST00000415600 ASCL4Q6XD76 172 aa16.65■□□□□ 0.26
PTPRU-203ENST00000415600 Q6ZTK2 550 aa16.65■□□□□ 0.26
PTPRU-203ENST00000415600 FAM89BQ8N5H3 189 aa16.65■□□□□ 0.26
PTPRU-203ENST00000415600 CHST4Q8NCG5 386 aa16.65■□□□□ 0.26
PTPRU-203ENST00000415600 OR56B1Q8NGI3 324 aa16.65■□□□□ 0.26
PTPRU-203ENST00000415600 OR13D1Q8NGV5 346 aa16.65■□□□□ 0.26
PTPRU-203ENST00000415600 NICN1Q9BSH3 213 aa16.65■□□□□ 0.26
PTPRU-203ENST00000415600 TM2D1Q9BX74 207 aa16.65■□□□□ 0.26
PTPRU-203ENST00000415600 ZNF107Q9UII5 783 aaPredicted RBP16.65■□□□□ 0.26
PTPRU-203ENST00000415600 TMEM235A6NFC5 223 aa16.64■□□□□ 0.25
PTPRU-203ENST00000415600 RBP4P02753 201 aa16.64■□□□□ 0.25
PTPRU-203ENST00000415600 MGMTP16455 207 aa16.64■□□□□ 0.25
PTPRU-203ENST00000415600 FAUP35544 74 aaKnown RBP16.64■□□□□ 0.25
PTPRU-203ENST00000415600 CEBPDP49716 269 aaPredicted RBP16.64■□□□□ 0.25
PTPRU-203ENST00000415600 CDNFQ49AH0 187 aa16.64■□□□□ 0.25
PTPRU-203ENST00000415600 GSTP1P09211 210 aaKnown RBP16.64■□□□□ 0.25
PTPRU-203ENST00000415600 TRAPPC2P0DI81 140 aa16.64■□□□□ 0.25
PTPRU-203ENST00000415600 TRAPPC2BP0DI82 140 aa16.64■□□□□ 0.25
PTPRU-203ENST00000415600 TMEM225BP0DP42 221 aa16.64■□□□□ 0.25
PTPRU-203ENST00000415600 SERPINA2P20848 420 aa16.64■□□□□ 0.25
PTPRU-203ENST00000415600 COX7A1P24310 79 aa16.64■□□□□ 0.25
PTPRU-203ENST00000415600 EDDM3BP56851 147 aa16.64■□□□□ 0.25
PTPRU-203ENST00000415600 COL10A1Q03692 680 aa16.64■□□□□ 0.25
PTPRU-203ENST00000415600 TATDN3Q17R31 274 aa16.64■□□□□ 0.25
PTPRU-203ENST00000415600 C2orf68Q2NKX9 166 aa16.64■□□□□ 0.25
PTPRU-203ENST00000415600 HCP5Q6MZN7 132 aa16.64■□□□□ 0.25
PTPRU-203ENST00000415600 SLC25A26Q70HW3 274 aa16.64■□□□□ 0.25
PTPRU-203ENST00000415600 PXT1Q8NFP0 134 aa16.64■□□□□ 0.25
PTPRU-203ENST00000415600 SELENOIQ9C0D9 397 aa16.64■□□□□ 0.25
PTPRU-203ENST00000415600 METTL9Q9H1A3 318 aa16.64■□□□□ 0.25
PTPRU-203ENST00000415600 RANBP3Q9H6Z4 567 aaPredicted RBP16.64■□□□□ 0.25
PTPRU-203ENST00000415600 MEIS3P1A6NDR6 274 aa16.63■□□□□ 0.25
PTPRU-203ENST00000415600 H3BUI4 141 aa16.63■□□□□ 0.25
PTPRU-203ENST00000415600 AKAIN1P0CW23 69 aa16.63■□□□□ 0.25
PTPRU-203ENST00000415600 HLA-DMAP28067 261 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms