RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 SNAI3Q3KNW1 292 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 C1orf140Q5VVS0 124 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 C1QL3Q5VWW1 255 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 ANKRD37Q7Z713 158 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 LHFPL4Q7Z7J7 247 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 NIT1Q86X76 327 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 C17orf78Q8N4C9 275 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 SIGLECL1Q8N7X8 197 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 OR10G3Q8NGC4 313 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 OR4D5Q8NGN0 318 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 RNF166Q96A37 237 aaPredicted RBP6.8□□□□□ -1.32
SIK3-203ENST00000415541 ADIPOR1Q96A54 375 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 ST6GALNAC5Q9BVH7 336 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 RBM24Q9BX46 236 aaKnown RBP6.8□□□□□ -1.32
SIK3-203ENST00000415541 LPAR5Q9H1C0 372 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 COL4A3Q01955 1670 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 PCNX2A6NKB5 2137 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 DUXBA0A1W2PPF3 345 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 FAM221AA4D161 298 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 SHISA7A6NL88 538 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 TGFBR3LH3BV60 316 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 TECTAO75443 2155 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 TYMSP04818 313 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 GDF1P27539 372 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 HINT1P49773 126 aaPredicted RBP6.8□□□□□ -1.32
SIK3-203ENST00000415541 CLDN18P56856 261 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 FUT7Q11130 342 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 SCGB2A2Q13296 93 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 MSMO1Q15800 293 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 TMEM95Q3KNT9 176 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 UEVLDQ8IX04 471 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 OR2C3Q8N628 320 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 TMEM105Q8N8V8 129 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 LOXL4Q96JB6 756 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 HIPK2Q9H2X6 1198 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 PLEKHF2Q9H8W4 249 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 ZNF319Q9P2F9 582 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 TRAV36DV7A0A075B6V5 113 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 TRAV1-1A0A0B4J248 108 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 ZIC2O95409 532 aaPredicted RBP6.8□□□□□ -1.32
SIK3-203ENST00000415541 CTSDP07339 412 aaPredicted RBP6.8□□□□□ -1.32
SIK3-203ENST00000415541 CTXN2P0C2S0 81 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 GNRHRP30968 328 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 GNB2P62879 340 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 CFHR1Q03591 330 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 UNQ5815/PRO19632Q6UWF5 114 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 CATSPERDQ86XM0 798 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 OR13G1Q8NGZ3 307 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 OR5B3Q8NH48 314 aa6.8□□□□□ -1.32
SIK3-203ENST00000415541 A0A0U1RQK1 487 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 GJE1A6NN92 205 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 ZNF732B4DXR9 585 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 IGFBP3P17936 291 aaPredicted RBP6.79□□□□□ -1.32
SIK3-203ENST00000415541 CDKN2AP42771 156 aaKnown RBP6.79□□□□□ -1.32
SIK3-203ENST00000415541 RPL18Q07020 188 aaKnown RBP6.79□□□□□ -1.32
SIK3-203ENST00000415541 IL11RAQ14626 422 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 CLEC12BQ2HXU8 276 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 EMC4Q5J8M3 183 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 CYP2G1PQ6ZSU1 146 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 YRDCQ86U90 279 aaKnown RBP6.79□□□□□ -1.32
SIK3-203ENST00000415541 BAGE3Q86Y29 109 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 BAGE2Q86Y30 109 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 ARHGEF39Q8N4T4 335 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 DEFB124Q8NES8 71 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 OR5D18Q8NGL1 313 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 SPIN2AQ99865 258 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 SPIN2BQ9BPZ2 258 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 MANBALQ9NQG1 85 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 CLN8Q9UBY8 286 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 MRPS16Q9Y3D3 137 aaKnown RBP6.79□□□□□ -1.32
SIK3-203ENST00000415541 AHRRA9YTQ3 701 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 DIRC3C9JPN6 131 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 MPIG6BO95866 241 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 CD99P14209 185 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 KRTDAPP60985 99 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 TPTE2P1Q5T6R2 138 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 OR4A47Q6IF82 309 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 MRGPRGQ86SM5 289 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 FBXL14Q8N1E6 418 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 PNKDQ8N490 385 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 OR2V1Q8NHB1 315 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 OTOSQ8NHW6 89 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 KCNG3Q8TAE7 436 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 ZPLD1Q8TCW7 415 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 SCGB1C1Q8TD33 95 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 CTHRC1Q96CG8 243 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 SLC5A6Q9Y289 635 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 LRRK1Q38SD2 2015 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 PTPRSQ13332 1948 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 A0A1W2PRS3 328 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 SDCBPO00560 298 aaPredicted RBP6.79□□□□□ -1.32
SIK3-203ENST00000415541 HIST1H1DP16402 221 aaKnown RBP6.79□□□□□ -1.32
SIK3-203ENST00000415541 PTGER4P35408 488 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 SNU13P55769 128 aaKnown RBP6.79□□□□□ -1.32
SIK3-203ENST00000415541 LHFPL1Q86WI0 220 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 ABHD14AQ9BUJ0 271 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 MEGF9Q9H1U4 602 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 MED29Q9NX70 200 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 KLHL13Q9P2N7 655 aa6.79□□□□□ -1.32
SIK3-203ENST00000415541 ICE1Q9Y2F5 2266 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms