RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 GABPB1Q06547 395 aaPredicted RBP19.85■□□□□ 0.77
HLA-C-204ENST00000415537 OXLD1Q5BKU9 147 aa19.85■□□□□ 0.77
HLA-C-204ENST00000415537 KHDC1LQ5JSQ8 128 aa19.85■□□□□ 0.77
HLA-C-204ENST00000415537 KPRPQ5T749 579 aaPredicted RBP19.85■□□□□ 0.77
HLA-C-204ENST00000415537 PRR18Q8N4B5 295 aa19.85■□□□□ 0.77
HLA-C-204ENST00000415537 MS4A15Q8N5U1 240 aa19.85■□□□□ 0.77
HLA-C-204ENST00000415537 LINC00311Q8N616 119 aa19.85■□□□□ 0.77
HLA-C-204ENST00000415537 C8orf31Q8N9H6 132 aa19.85■□□□□ 0.77
HLA-C-204ENST00000415537 OR4K15Q8NH41 348 aa19.85■□□□□ 0.77
HLA-C-204ENST00000415537 SCN3BQ9NY72 215 aa19.85■□□□□ 0.77
HLA-C-204ENST00000415537 GHRLQ9UBU3 117 aa19.85■□□□□ 0.77
HLA-C-204ENST00000415537 TGP01266 2768 aa19.84■□□□□ 0.77
HLA-C-204ENST00000415537 FGF16O43320 207 aa19.84■□□□□ 0.77
HLA-C-204ENST00000415537 FUT3P21217 361 aa19.84■□□□□ 0.77
HLA-C-204ENST00000415537 REG1BP48304 166 aa19.84■□□□□ 0.77
HLA-C-204ENST00000415537 GPR50Q13585 617 aa19.84■□□□□ 0.77
HLA-C-204ENST00000415537 Q3ZCU0 254 aa19.84■□□□□ 0.77
HLA-C-204ENST00000415537 ACSM3Q53FZ2 586 aa19.84■□□□□ 0.77
HLA-C-204ENST00000415537 TCTEX1D4Q5JR98 221 aa19.84■□□□□ 0.77
HLA-C-204ENST00000415537 C6orf141Q5SZD1 244 aa19.84■□□□□ 0.77
HLA-C-204ENST00000415537 RNLSQ5VYX0 342 aa19.84■□□□□ 0.77
HLA-C-204ENST00000415537 TRAT1Q6PIZ9 186 aa19.84■□□□□ 0.77
HLA-C-204ENST00000415537 C5orf56Q8N8D9 126 aa19.84■□□□□ 0.77
HLA-C-204ENST00000415537 TMEM104Q8NE00 496 aa19.84■□□□□ 0.77
HLA-C-204ENST00000415537 CST11Q9H112 138 aa19.84■□□□□ 0.77
HLA-C-204ENST00000415537 GNG12Q9UBI6 72 aa19.84■□□□□ 0.77
HLA-C-204ENST00000415537 PSMB11A5LHX3 300 aa19.83■□□□□ 0.77
HLA-C-204ENST00000415537 C12orf77C9JDV5 145 aa19.83■□□□□ 0.77
HLA-C-204ENST00000415537 CA11O75493 328 aa19.83■□□□□ 0.77
HLA-C-204ENST00000415537 PF4P02776 101 aa19.83■□□□□ 0.77
HLA-C-204ENST00000415537 C10orf99Q6UWK7 81 aa19.83■□□□□ 0.77
HLA-C-204ENST00000415537 LYPD6Q86Y78 171 aa19.83■□□□□ 0.77
HLA-C-204ENST00000415537 FAM46BQ96A09 425 aa19.83■□□□□ 0.77
HLA-C-204ENST00000415537 Q96M66 194 aa19.83■□□□□ 0.77
HLA-C-204ENST00000415537 TMED9Q9BVK6 235 aa19.83■□□□□ 0.77
HLA-C-204ENST00000415537 IGHV3-72A0A0B4J1Y9 119 aa19.82■□□□□ 0.76
HLA-C-204ENST00000415537 UBE2QL1A1L167 161 aa19.82■□□□□ 0.76
HLA-C-204ENST00000415537 GLAP06280 429 aa19.82■□□□□ 0.76
HLA-C-204ENST00000415537 VHLP40337 213 aa19.82■□□□□ 0.76
HLA-C-204ENST00000415537 SPHARQ15513 63 aa19.82■□□□□ 0.76
HLA-C-204ENST00000415537 TMEM30BQ3MIR4 351 aa19.82■□□□□ 0.76
HLA-C-204ENST00000415537 GLT8D1Q68CQ7 371 aa19.82■□□□□ 0.76
HLA-C-204ENST00000415537 REC114Q7Z4M0 266 aa19.82■□□□□ 0.76
HLA-C-204ENST00000415537 SGCDQ92629 289 aa19.82■□□□□ 0.76
HLA-C-204ENST00000415537 NKX1-2Q9UD57 310 aaPredicted RBP19.82■□□□□ 0.76
HLA-C-204ENST00000415537 NCBP2LA6PVI3 153 aaKnown RBP19.81■□□□□ 0.76
HLA-C-204ENST00000415537 H0YHG0 523 aa19.81■□□□□ 0.76
HLA-C-204ENST00000415537 HBZP02008 142 aa19.81■□□□□ 0.76
HLA-C-204ENST00000415537 INSL4Q14641 139 aa19.81■□□□□ 0.76
HLA-C-204ENST00000415537 MED22Q15528 200 aa19.81■□□□□ 0.76
HLA-C-204ENST00000415537 RBM48Q5RL73 367 aaKnown RBP19.81■□□□□ 0.76
HLA-C-204ENST00000415537 FAM53AQ6NSI3 398 aaPredicted RBP19.81■□□□□ 0.76
HLA-C-204ENST00000415537 UNQ9370/PRO34162Q6UXP9 181 aa19.81■□□□□ 0.76
HLA-C-204ENST00000415537 OR2T10Q8NGZ9 312 aa19.81■□□□□ 0.76
HLA-C-204ENST00000415537 CHPT1Q8WUD6 406 aa19.81■□□□□ 0.76
HLA-C-204ENST00000415537 RTN4IP1Q8WWV3 396 aaPredicted RBP19.81■□□□□ 0.76
HLA-C-204ENST00000415537 KCNIP1Q9NZI2 227 aa19.81■□□□□ 0.76
HLA-C-204ENST00000415537 SERPINE3A8MV23 424 aa19.8■□□□□ 0.76
HLA-C-204ENST00000415537 SC5DO75845 299 aa19.8■□□□□ 0.76
HLA-C-204ENST00000415537 PRB2P02812 416 aaPredicted RBP19.8■□□□□ 0.76
HLA-C-204ENST00000415537 UBBP0CG47 229 aa19.8■□□□□ 0.76
HLA-C-204ENST00000415537 RCC1P18754 421 aaPredicted RBP19.8■□□□□ 0.76
HLA-C-204ENST00000415537 EBI3Q14213 229 aa19.8■□□□□ 0.76
HLA-C-204ENST00000415537 GAPTQ8N292 157 aa19.8■□□□□ 0.76
HLA-C-204ENST00000415537 OR10V1Q8NGI7 309 aa19.8■□□□□ 0.76
HLA-C-204ENST00000415537 EAF1Q96JC9 268 aaPredicted RBP19.8■□□□□ 0.76
HLA-C-204ENST00000415537 TXNL1O43396 289 aa19.79■□□□□ 0.76
HLA-C-204ENST00000415537 PDCD6O75340 191 aa19.79■□□□□ 0.76
HLA-C-204ENST00000415537 MPIG6BO95866 241 aa19.79■□□□□ 0.76
HLA-C-204ENST00000415537 AQP4P55087 323 aa19.79■□□□□ 0.76
HLA-C-204ENST00000415537 FAM27D1Q5T7N8 215 aa19.79■□□□□ 0.76
HLA-C-204ENST00000415537 SIGIRRQ6IA17 410 aa19.79■□□□□ 0.76
HLA-C-204ENST00000415537 SLC25A48Q6ZT89 311 aaKnown RBP19.79■□□□□ 0.76
HLA-C-204ENST00000415537 SLC35E3Q7Z769 313 aa19.79■□□□□ 0.76
HLA-C-204ENST00000415537 ZNF329Q86UD4 541 aa19.79■□□□□ 0.76
HLA-C-204ENST00000415537 FOXRED2Q8IWF2 684 aa19.79■□□□□ 0.76
HLA-C-204ENST00000415537 IZUMO1Q8IYV9 350 aa19.79■□□□□ 0.76
HLA-C-204ENST00000415537 OR1L1Q8NH94 360 aa19.79■□□□□ 0.76
HLA-C-204ENST00000415537 ST6GALNAC6Q969X2 333 aa19.79■□□□□ 0.76
HLA-C-204ENST00000415537 NOL4LQ96MY1 436 aaPredicted RBP19.79■□□□□ 0.76
HLA-C-204ENST00000415537 NEDD4LQ96PU5 975 aa19.79■□□□□ 0.76
HLA-C-204ENST00000415537 TPRKBQ9Y3C4 175 aa19.79■□□□□ 0.76
HLA-C-204ENST00000415537 PRKDCP78527 4128 aaKnown RBP19.78■□□□□ 0.76
HLA-C-204ENST00000415537 SLC31A2O15432 143 aa19.78■□□□□ 0.76
HLA-C-204ENST00000415537 SRMP19623 302 aa19.78■□□□□ 0.76
HLA-C-204ENST00000415537 CD1BP29016 333 aa19.78■□□□□ 0.76
HLA-C-204ENST00000415537 SLC35B1P78383 322 aa19.78■□□□□ 0.76
HLA-C-204ENST00000415537 NKAPLQ5M9Q1 402 aa19.78■□□□□ 0.76
HLA-C-204ENST00000415537 CEACAM19Q7Z692 300 aa19.78■□□□□ 0.76
HLA-C-204ENST00000415537 TGIF2LXQ8IUE1 241 aa19.78■□□□□ 0.76
HLA-C-204ENST00000415537 WFDC9Q8NEX5 89 aa19.78■□□□□ 0.76
HLA-C-204ENST00000415537 PHYHIPQ92561 330 aa19.78■□□□□ 0.76
HLA-C-204ENST00000415537 PHF21AQ96BD5 680 aa19.78■□□□□ 0.76
HLA-C-204ENST00000415537 TAF9BQ9HBM6 251 aa19.78■□□□□ 0.76
HLA-C-204ENST00000415537 OR2S2Q9NQN1 319 aa19.78■□□□□ 0.76
HLA-C-204ENST00000415537 LSM2Q9Y333 95 aaKnown RBP19.78■□□□□ 0.76
HLA-C-204ENST00000415537 NOTCH3Q9UM47 2321 aa19.77■□□□□ 0.76
HLA-C-204ENST00000415537 SLC35A2P78381 396 aa19.77■□□□□ 0.76
HLA-C-204ENST00000415537 HSD17B12Q53GQ0 312 aa19.77■□□□□ 0.76
HLA-C-204ENST00000415537 ZNF439Q8NDP4 499 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms