RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 NBPF19A0A087WUL8 3843 aa11.74□□□□□ -0.53
SF3B1-204ENST00000414963 TRBV6-7A0A0A0MS04 114 aa11.74□□□□□ -0.53
SF3B1-204ENST00000414963 PPIAL4CA0A0B4J2A2 164 aa11.74□□□□□ -0.53
SF3B1-204ENST00000414963 A0A1W2PPH5 198 aa11.74□□□□□ -0.53
SF3B1-204ENST00000414963 C17orf98A8MV24 154 aa11.74□□□□□ -0.53
SF3B1-204ENST00000414963 C22orf46C9J442 243 aa11.74□□□□□ -0.53
SF3B1-204ENST00000414963 M0QYG6 137 aa11.74□□□□□ -0.53
SF3B1-204ENST00000414963 LYRM1O43325 122 aa11.74□□□□□ -0.53
SF3B1-204ENST00000414963 PMP2P02689 132 aa11.74□□□□□ -0.53
SF3B1-204ENST00000414963 RBP4P02753 201 aa11.74□□□□□ -0.53
SF3B1-204ENST00000414963 LIPFP07098 398 aa11.74□□□□□ -0.53
SF3B1-204ENST00000414963 ZNF728P0DKX0 622 aa11.74□□□□□ -0.53
SF3B1-204ENST00000414963 PPIAL4GP0DN37 164 aa11.74□□□□□ -0.53
SF3B1-204ENST00000414963 OR5H8P0DN80 308 aa11.74□□□□□ -0.53
SF3B1-204ENST00000414963 SSTR5P35346 364 aa11.74□□□□□ -0.53
SF3B1-204ENST00000414963 RFX2P48378 723 aa11.74□□□□□ -0.53
SF3B1-204ENST00000414963 ZNF273Q14593 569 aa11.74□□□□□ -0.53
SF3B1-204ENST00000414963 IGSF11Q5DX21 431 aa11.74□□□□□ -0.53
SF3B1-204ENST00000414963 ZNF660Q6AZW8 331 aaPredicted RBP11.74□□□□□ -0.53
SF3B1-204ENST00000414963 C5orf24Q7Z6I8 188 aa11.74□□□□□ -0.53
SF3B1-204ENST00000414963 OR52M1Q8NGK5 317 aa11.74□□□□□ -0.53
SF3B1-204ENST00000414963 OR1L1Q8NH94 360 aa11.74□□□□□ -0.53
SF3B1-204ENST00000414963 GIMAP1Q8WWP7 306 aa11.74□□□□□ -0.53
SF3B1-204ENST00000414963 KIRREL1Q96J84 757 aa11.74□□□□□ -0.53
SF3B1-204ENST00000414963 ZNF714Q96N38 554 aa11.74□□□□□ -0.53
SF3B1-204ENST00000414963 C11orf54Q9H0W9 315 aaPredicted RBP11.74□□□□□ -0.53
SF3B1-204ENST00000414963 GAL3ST2Q9H3Q3 398 aa11.74□□□□□ -0.53
SF3B1-204ENST00000414963 SLC2A8Q9NY64 477 aa11.74□□□□□ -0.53
SF3B1-204ENST00000414963 ASH1LQ9NR48 2969 aaKnown RBP11.74□□□□□ -0.53
SF3B1-204ENST00000414963 LINC00854A0A1B0GVQ3 168 aa11.73□□□□□ -0.53
SF3B1-204ENST00000414963 DISC1C4P0D8 188 aa11.73□□□□□ -0.53
SF3B1-204ENST00000414963 FPR2P25090 351 aa11.73□□□□□ -0.53
SF3B1-204ENST00000414963 IL2RGP31785 369 aa11.73□□□□□ -0.53
SF3B1-204ENST00000414963 MZT2BQ6NZ67 158 aa11.73□□□□□ -0.53
SF3B1-204ENST00000414963 HEPN1Q6WQI6 88 aa11.73□□□□□ -0.53
SF3B1-204ENST00000414963 C1orf122Q6ZSJ8 110 aa11.73□□□□□ -0.53
SF3B1-204ENST00000414963 FAM185AQ8N0U4 392 aa11.73□□□□□ -0.53
SF3B1-204ENST00000414963 C11orf42Q8N5U0 333 aa11.73□□□□□ -0.53
SF3B1-204ENST00000414963 POC5Q8NA72 575 aa11.73□□□□□ -0.53
SF3B1-204ENST00000414963 SLC6A7Q99884 636 aa11.73□□□□□ -0.53
SF3B1-204ENST00000414963 REG4Q9BYZ8 158 aa11.73□□□□□ -0.53
SF3B1-204ENST00000414963 EHFQ9NZC4 300 aa11.73□□□□□ -0.53
SF3B1-204ENST00000414963 FAM157AC9JC47 383 aa11.72□□□□□ -0.53
SF3B1-204ENST00000414963 ENSAO43768 121 aaKnown RBP11.72□□□□□ -0.53
SF3B1-204ENST00000414963 TUSC2O75896 110 aa11.72□□□□□ -0.53
SF3B1-204ENST00000414963 AMY2AP04746 511 aa11.72□□□□□ -0.53
SF3B1-204ENST00000414963 IFNA6P05013 189 aa11.72□□□□□ -0.53
SF3B1-204ENST00000414963 ZBTB25P24278 435 aa11.72□□□□□ -0.53
SF3B1-204ENST00000414963 SLC6A1P30531 599 aa11.72□□□□□ -0.53
SF3B1-204ENST00000414963 BTCP35070 178 aa11.72□□□□□ -0.53
SF3B1-204ENST00000414963 LOXL3P58215 753 aa11.72□□□□□ -0.53
SF3B1-204ENST00000414963 LY6G6FQ5SQ64 297 aa11.72□□□□□ -0.53
SF3B1-204ENST00000414963 TMEM17Q86X19 198 aa11.72□□□□□ -0.53
SF3B1-204ENST00000414963 H1FOOQ8IZA3 346 aaPredicted RBP11.72□□□□□ -0.53
SF3B1-204ENST00000414963 KIR3DL3Q8N743 410 aa11.72□□□□□ -0.53
SF3B1-204ENST00000414963 OR6F1Q8NGZ6 308 aa11.72□□□□□ -0.53
SF3B1-204ENST00000414963 OR56B4Q8NH76 319 aa11.72□□□□□ -0.53
SF3B1-204ENST00000414963 OR10J5Q8NHC4 309 aa11.72□□□□□ -0.53
SF3B1-204ENST00000414963 RFESDQ8TAC1 157 aa11.72□□□□□ -0.53
SF3B1-204ENST00000414963 Q96MF0 132 aa11.72□□□□□ -0.53
SF3B1-204ENST00000414963 PRRT1Q99946 306 aa11.72□□□□□ -0.53
SF3B1-204ENST00000414963 IDI2-AS1Q9NZ38 188 aa11.72□□□□□ -0.53
SF3B1-204ENST00000414963 JPT1Q9UK76 154 aa11.72□□□□□ -0.53
SF3B1-204ENST00000414963 MAP1AP78559 2803 aaPredicted RBP11.72□□□□□ -0.53
SF3B1-204ENST00000414963 IGHV2-70DA0A0C4DH43 119 aa11.71□□□□□ -0.53
SF3B1-204ENST00000414963 MEX3AA1L020 520 aaKnown RBP11.71□□□□□ -0.53
SF3B1-204ENST00000414963 M0R1W7 72 aa11.71□□□□□ -0.53
SF3B1-204ENST00000414963 SDCBPO00560 298 aaPredicted RBP11.71□□□□□ -0.53
SF3B1-204ENST00000414963 BET1O15155 118 aa11.71□□□□□ -0.53
SF3B1-204ENST00000414963 PTTG1O95997 202 aa11.71□□□□□ -0.53
SF3B1-204ENST00000414963 CCL3L1P16619 93 aa11.71□□□□□ -0.53
SF3B1-204ENST00000414963 LCN2P80188 198 aa11.71□□□□□ -0.53
SF3B1-204ENST00000414963 RGS21Q2M5E4 152 aa11.71□□□□□ -0.53
SF3B1-204ENST00000414963 PLA1AQ53H76 456 aa11.71□□□□□ -0.53
SF3B1-204ENST00000414963 FAAP20Q6NZ36 180 aa11.71□□□□□ -0.53
SF3B1-204ENST00000414963 ZNF782Q6ZMW2 699 aaPredicted RBP11.71□□□□□ -0.53
SF3B1-204ENST00000414963 LHFPL1Q86WI0 220 aa11.71□□□□□ -0.53
SF3B1-204ENST00000414963 PRR18Q8N4B5 295 aa11.71□□□□□ -0.53
SF3B1-204ENST00000414963 DUSP18Q8NEJ0 188 aa11.71□□□□□ -0.53
SF3B1-204ENST00000414963 OR51S1Q8NGJ8 323 aa11.71□□□□□ -0.53
SF3B1-204ENST00000414963 TERB2Q8NHR7 220 aa11.71□□□□□ -0.53
SF3B1-204ENST00000414963 FAM216AQ8WUB2 273 aa11.71□□□□□ -0.53
SF3B1-204ENST00000414963 IL1F10Q8WWZ1 152 aa11.71□□□□□ -0.53
SF3B1-204ENST00000414963 MCUBQ9NWR8 336 aa11.71□□□□□ -0.53
SF3B1-204ENST00000414963 GFOD1Q9NXC2 390 aa11.71□□□□□ -0.53
SF3B1-204ENST00000414963 SCP2D1Q9UJQ7 156 aa11.71□□□□□ -0.53
SF3B1-204ENST00000414963 FLNBO75369 2602 aaKnown RBP11.71□□□□□ -0.54
SF3B1-204ENST00000414963 CSMD2Q7Z408 3487 aa11.7□□□□□ -0.54
SF3B1-204ENST00000414963 A0A087X0M5 115 aa11.7□□□□□ -0.54
SF3B1-204ENST00000414963 A0A1B0GX30 115 aa11.7□□□□□ -0.54
SF3B1-204ENST00000414963 hCG_1809904A0A1W2PP81 198 aa11.7□□□□□ -0.54
SF3B1-204ENST00000414963 A0A1W2PPE2 198 aa11.7□□□□□ -0.54
SF3B1-204ENST00000414963 A0A1W2PR64 198 aa11.7□□□□□ -0.54
SF3B1-204ENST00000414963 A0A1W2PRV1 198 aa11.7□□□□□ -0.54
SF3B1-204ENST00000414963 B4DSR2 109 aa11.7□□□□□ -0.54
SF3B1-204ENST00000414963 RNF223E7ERA6 249 aa11.7□□□□□ -0.54
SF3B1-204ENST00000414963 ITGB1BP1O14713 200 aa11.7□□□□□ -0.54
SF3B1-204ENST00000414963 YPEL1O60688 119 aa11.7□□□□□ -0.54
SF3B1-204ENST00000414963 FCGR2CP31995 323 aa11.7□□□□□ -0.54
SF3B1-204ENST00000414963 TSPAN5P62079 268 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms