RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 LIPKQ5VXJ0 399 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 TRAT1Q6PIZ9 186 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 ZNF782Q6ZMW2 699 aaPredicted RBP3.98□□□□□ -1.77
VPS41-205ENST00000414632 RBPMS2Q6ZRY4 209 aaKnown RBP3.98□□□□□ -1.77
VPS41-205ENST00000414632 MKXQ8IYA7 352 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 FAM58AQ8N1B3 248 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 Q8N7P7 452 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.98□□□□□ -1.77
VPS41-205ENST00000414632 LY6G5BQ8NDX9 201 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 TSPAN14Q8NG11 270 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 OR5D14Q8NGL3 314 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 RPS4Y2Q8TD47 263 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 ZNF418Q8TF45 676 aaPredicted RBP3.98□□□□□ -1.77
VPS41-205ENST00000414632 TNFAIP8L1Q8WVP5 186 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 MYDGFQ969H8 173 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 ITFG2Q969R8 447 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 TMEM203Q969S6 136 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 SPSB1Q96BD6 273 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 UPRTQ96BW1 309 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 C10orf35Q96D05 121 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 SDSLQ96GA7 329 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 CYYR1Q96J86 154 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 CITED2Q99967 270 aaPredicted RBP3.98□□□□□ -1.77
VPS41-205ENST00000414632 C19orf24Q9BVV8 132 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 MND1Q9BWT6 205 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 DNTTIP1Q9H147 329 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 ZNF581Q9P0T4 197 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 ING4Q9UNL4 249 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 ERGIC3Q9Y282 383 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 LSM2Q9Y333 95 aaKnown RBP3.98□□□□□ -1.77
VPS41-205ENST00000414632 TPRKBQ9Y3C4 175 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 TRBV5-5A0A0J9YX44 114 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 A0A0U1RQK1 487 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 A0A1W2PP11 408 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 FAM172BPA6NC97 362 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 DNAJC9-AS1A6NH13 148 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 RNASEK-C17orf49H0YIS7 233 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 K7N7A8 449 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 PIN1P1O15428 100 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 MAGEB3O15480 346 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 PROP1O75360 226 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 ZNF737O75373 536 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 KDM4BO94953 1096 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 ECDO95905 644 aaPredicted RBP3.97□□□□□ -1.77
VPS41-205ENST00000414632 OR2H2O95918 312 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 ZNF44P15621 663 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 SERPINA2P20848 420 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 COX7A1P24310 79 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 CRHBPP24387 322 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 BDKRB2P30411 391 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 ZNF93P35789 620 aaPredicted RBP3.97□□□□□ -1.77
VPS41-205ENST00000414632 OR3A1P47881 315 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 HSPA13P48723 471 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 COMPP49747 757 aaPredicted RBP3.97□□□□□ -1.77
VPS41-205ENST00000414632 CAV3P56539 151 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 TAS2R43P59537 309 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 RPS25P62851 125 aaKnown RBP3.97□□□□□ -1.77
VPS41-205ENST00000414632 RPL31P62899 125 aaKnown RBP3.97□□□□□ -1.77
VPS41-205ENST00000414632 PPP3R1P63098 170 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 BAMBIQ13145 260 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 ATXN7L3Q14CW9 347 aaPredicted RBP3.97□□□□□ -1.77
VPS41-205ENST00000414632 RSU1Q15404 277 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 SPHARQ15513 63 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 GRK1Q15835 563 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 DEFB112Q30KQ8 113 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 PIGYQ3MUY2 71 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 YIF1BQ5BJH7 314 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 GPR157Q5UAW9 335 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 GGNBP1Q5YKI7 109 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 FIP1L1Q6UN15 594 aaKnown RBP3.97□□□□□ -1.77
VPS41-205ENST00000414632 ZNF66Q6ZN08 573 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 C17orf107Q6ZR85 190 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 GDPD3Q7L5L3 318 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 ZNF561Q8N587 486 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 JAGN1Q8N5M9 183 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 TEX29Q8N6K0 151 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 ZDHHC22Q8N966 263 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 OR4S1Q8NGB4 309 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 HAVCR2Q8TDQ0 301 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 C1orf147Q96MC9 270 aaPredicted RBP3.97□□□□□ -1.77
VPS41-205ENST00000414632 DERL3Q96Q80 235 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 ZNF184Q99676 751 aaPredicted RBP3.97□□□□□ -1.77
VPS41-205ENST00000414632 SUCNR1Q9BXA5 334 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 CDCA4Q9BXL8 241 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 PPIL3Q9H2H8 161 aaKnown RBP3.97□□□□□ -1.77
VPS41-205ENST00000414632 PPA2Q9H2U2 334 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 KCNK15Q9H427 330 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 DUSP21Q9H596 190 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 MAP6D1Q9H9H5 199 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 HMG20AQ9NP66 347 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 EXOSC4Q9NPD3 245 aaKnown RBP3.97□□□□□ -1.77
VPS41-205ENST00000414632 NOX4Q9NPH5 578 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 MSRB1Q9NZV6 116 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 RAB26Q9ULW5 256 aa3.97□□□□□ -1.77
VPS41-205ENST00000414632 TRAV39A0A0B4J263 110 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 IGHV1-69DA0A0B4J2H0 117 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 A0A0G2JK05 382 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 MEIOCA2RUB1 952 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 CGB1A6NKQ9 187 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 LINC01548A6NM66 108 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms