RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 LAIR2Q6ISS4 152 aa12.28□□□□□ -0.44
ACTB-202ENST00000414620 C8orf86Q6ZUL3 223 aa12.28□□□□□ -0.44
ACTB-202ENST00000414620 LINC00482Q8N8I6 264 aa12.28□□□□□ -0.44
ACTB-202ENST00000414620 CHPT1Q8WUD6 406 aa12.28□□□□□ -0.44
ACTB-202ENST00000414620 RCC1LQ96I51 464 aaKnown RBP12.28□□□□□ -0.44
ACTB-202ENST00000414620 RCC2Q9P258 522 aaKnown RBP12.28□□□□□ -0.44
ACTB-202ENST00000414620 DNAH3Q8TD57 4116 aa12.27□□□□□ -0.45
ACTB-202ENST00000414620 ZNF736B4DX44 427 aaPredicted RBP12.27□□□□□ -0.45
ACTB-202ENST00000414620 ORC5O43913 435 aa12.27□□□□□ -0.45
ACTB-202ENST00000414620 CELP19835 753 aa12.27□□□□□ -0.45
ACTB-202ENST00000414620 IL3RAP26951 378 aa12.27□□□□□ -0.45
ACTB-202ENST00000414620 CAPGP40121 348 aa12.27□□□□□ -0.45
ACTB-202ENST00000414620 TAS2R43P59537 309 aa12.27□□□□□ -0.45
ACTB-202ENST00000414620 FOXRED2Q8IWF2 684 aa12.27□□□□□ -0.45
ACTB-202ENST00000414620 IZUMO1Q8IYV9 350 aa12.27□□□□□ -0.45
ACTB-202ENST00000414620 C8orf59Q8N0T1 100 aaPredicted RBP12.27□□□□□ -0.45
ACTB-202ENST00000414620 STPG2Q8N412 459 aa12.27□□□□□ -0.45
ACTB-202ENST00000414620 LINC00311Q8N616 119 aa12.27□□□□□ -0.45
ACTB-202ENST00000414620 PACRGLQ8N7B6 248 aa12.27□□□□□ -0.45
ACTB-202ENST00000414620 KLHL30-AS1Q8NEE0 82 aa12.27□□□□□ -0.45
ACTB-202ENST00000414620 OR51D1Q8NGF3 324 aa12.27□□□□□ -0.45
ACTB-202ENST00000414620 OR52M1Q8NGK5 317 aa12.27□□□□□ -0.45
ACTB-202ENST00000414620 OR1L1Q8NH94 360 aa12.27□□□□□ -0.45
ACTB-202ENST00000414620 RTN4IP1Q8WWV3 396 aaPredicted RBP12.27□□□□□ -0.45
ACTB-202ENST00000414620 DERL3Q96Q80 235 aa12.27□□□□□ -0.45
ACTB-202ENST00000414620 SELENOIQ9C0D9 397 aa12.27□□□□□ -0.45
ACTB-202ENST00000414620 GNG12Q9UBI6 72 aa12.27□□□□□ -0.45
ACTB-202ENST00000414620 PEX16Q9Y5Y5 336 aa12.27□□□□□ -0.45
ACTB-202ENST00000414620 EFCAB10A6NFE3 127 aa12.26□□□□□ -0.45
ACTB-202ENST00000414620 K7EIL1 84 aa12.26□□□□□ -0.45
ACTB-202ENST00000414620 CRTAPO75718 401 aaPredicted RBP12.26□□□□□ -0.45
ACTB-202ENST00000414620 IGHG2P01859 326 aa12.26□□□□□ -0.45
ACTB-202ENST00000414620 MGMTP16455 207 aa12.26□□□□□ -0.45
ACTB-202ENST00000414620 KRTAP10-11P60412 298 aa12.26□□□□□ -0.45
ACTB-202ENST00000414620 SLC35B1P78383 322 aa12.26□□□□□ -0.45
ACTB-202ENST00000414620 EBI3Q14213 229 aa12.26□□□□□ -0.45
ACTB-202ENST00000414620 OR2W3Q7Z3T1 314 aa12.26□□□□□ -0.45
ACTB-202ENST00000414620 C5orf24Q7Z6I8 188 aa12.26□□□□□ -0.45
ACTB-202ENST00000414620 MRPL41Q8IXM3 137 aaKnown RBP12.26□□□□□ -0.45
ACTB-202ENST00000414620 Q8N9W7 124 aa12.26□□□□□ -0.45
ACTB-202ENST00000414620 TMEM104Q8NE00 496 aa12.26□□□□□ -0.45
ACTB-202ENST00000414620 BPIFB6Q8NFQ5 453 aa12.26□□□□□ -0.45
ACTB-202ENST00000414620 OR2T10Q8NGZ9 312 aa12.26□□□□□ -0.45
ACTB-202ENST00000414620 FAM46BQ96A09 425 aa12.26□□□□□ -0.45
ACTB-202ENST00000414620 DUX3Q96PT4 197 aa12.26□□□□□ -0.45
ACTB-202ENST00000414620 SPACA1Q9HBV2 294 aa12.26□□□□□ -0.45
ACTB-202ENST00000414620 C8orf4Q9NR00 106 aa12.26□□□□□ -0.45
ACTB-202ENST00000414620 WI2-2373I1.2A0A1W2PRP0 233 aa12.25□□□□□ -0.45
ACTB-202ENST00000414620 UBE2QL1A1L167 161 aa12.25□□□□□ -0.45
ACTB-202ENST00000414620 SPINT2O43291 252 aa12.25□□□□□ -0.45
ACTB-202ENST00000414620 HBZP02008 142 aa12.25□□□□□ -0.45
ACTB-202ENST00000414620 RCC1P18754 421 aaPredicted RBP12.25□□□□□ -0.45
ACTB-202ENST00000414620 GPR12P47775 334 aa12.25□□□□□ -0.45
ACTB-202ENST00000414620 THBS3P49746 956 aa12.25□□□□□ -0.45
ACTB-202ENST00000414620 WNT4P56705 351 aa12.25□□□□□ -0.45
ACTB-202ENST00000414620 C6orf183Q5T699 404 aa12.25□□□□□ -0.45
ACTB-202ENST00000414620 LCNL1Q6ZST4 164 aa12.25□□□□□ -0.45
ACTB-202ENST00000414620 TGIF2LXQ8IUE1 241 aa12.25□□□□□ -0.45
ACTB-202ENST00000414620 Q8N6K4 173 aa12.25□□□□□ -0.45
ACTB-202ENST00000414620 ZNF439Q8NDP4 499 aa12.25□□□□□ -0.45
ACTB-202ENST00000414620 TFAP2CQ92754 450 aa12.25□□□□□ -0.45
ACTB-202ENST00000414620 ST6GALNAC6Q969X2 333 aa12.25□□□□□ -0.45
ACTB-202ENST00000414620 CNOT2Q9NZN8 540 aaKnown RBP12.25□□□□□ -0.45
ACTB-202ENST00000414620 PSORS1C1Q9UIG5 152 aa12.25□□□□□ -0.45
ACTB-202ENST00000414620 DUS4LO95620 317 aaKnown RBP12.24□□□□□ -0.45
ACTB-202ENST00000414620 ZNF134P52741 427 aa12.24□□□□□ -0.45
ACTB-202ENST00000414620 INSL4Q14641 139 aa12.24□□□□□ -0.45
ACTB-202ENST00000414620 GNMTQ14749 295 aa12.24□□□□□ -0.45
ACTB-202ENST00000414620 CT45A1Q5HYN5 189 aa12.24□□□□□ -0.45
ACTB-202ENST00000414620 NKAPLQ5M9Q1 402 aa12.24□□□□□ -0.45
ACTB-202ENST00000414620 SIGIRRQ6IA17 410 aa12.24□□□□□ -0.45
ACTB-202ENST00000414620 SLC25A48Q6ZT89 311 aaKnown RBP12.24□□□□□ -0.45
ACTB-202ENST00000414620 C8orf31Q8N9H6 132 aa12.24□□□□□ -0.45
ACTB-202ENST00000414620 CT45A3Q8NHU0 189 aa12.24□□□□□ -0.45
ACTB-202ENST00000414620 MRPS24Q96EL2 167 aaKnown RBP12.24□□□□□ -0.45
ACTB-202ENST00000414620 Q96M66 194 aa12.24□□□□□ -0.45
ACTB-202ENST00000414620 ABCG5Q9H222 651 aa12.24□□□□□ -0.45
ACTB-202ENST00000414620 LIN7CQ9NUP9 197 aaKnown RBP12.24□□□□□ -0.45
ACTB-202ENST00000414620 AP4M1O00189 453 aa12.23□□□□□ -0.45
ACTB-202ENST00000414620 MOSP00540 346 aa12.23□□□□□ -0.45
ACTB-202ENST00000414620 CD1BP29016 333 aa12.23□□□□□ -0.45
ACTB-202ENST00000414620 RAB25P57735 213 aa12.23□□□□□ -0.45
ACTB-202ENST00000414620 GPR50Q13585 617 aa12.23□□□□□ -0.45
ACTB-202ENST00000414620 DEFB121Q5J5C9 76 aa12.23□□□□□ -0.45
ACTB-202ENST00000414620 FAM27D1Q5T7N8 215 aa12.23□□□□□ -0.45
ACTB-202ENST00000414620 OGFRL1Q5TC84 451 aaPredicted RBP12.23□□□□□ -0.45
ACTB-202ENST00000414620 LYPD6Q86Y78 171 aa12.23□□□□□ -0.45
ACTB-202ENST00000414620 NANOGP1Q8N7R0 232 aa12.23□□□□□ -0.45
ACTB-202ENST00000414620 NKAIN3Q8N8D7 197 aa12.23□□□□□ -0.45
ACTB-202ENST00000414620 OR52L2PQ8NGH6 319 aa12.23□□□□□ -0.45
ACTB-202ENST00000414620 DPF1Q92782 380 aa12.23□□□□□ -0.45
ACTB-202ENST00000414620 S1PR3Q99500 378 aa12.23□□□□□ -0.45
ACTB-202ENST00000414620 RASL11BQ9BPW5 248 aa12.23□□□□□ -0.45
ACTB-202ENST00000414620 HSPB9Q9BQS6 159 aa12.23□□□□□ -0.45
ACTB-202ENST00000414620 KCNK15Q9H427 330 aa12.23□□□□□ -0.45
ACTB-202ENST00000414620 TAF9BQ9HBM6 251 aa12.23□□□□□ -0.45
ACTB-202ENST00000414620 RAB9BQ9NP90 201 aa12.23□□□□□ -0.45
ACTB-202ENST00000414620 ZFP57Q9NU63 452 aa12.23□□□□□ -0.45
ACTB-202ENST00000414620 RPLP1P05386 114 aaKnown RBP12.22□□□□□ -0.45
ACTB-202ENST00000414620 FUT3P21217 361 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 168.8 ms