RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 IGHV3-43DP0DP04 118 aa12.01□□□□□ -0.49
SMARCA4-202ENST00000413806 CCL3P10147 92 aa12.01□□□□□ -0.49
SMARCA4-202ENST00000413806 PMELP40967 661 aa12.01□□□□□ -0.49
SMARCA4-202ENST00000413806 NANOS3P60323 173 aaKnown RBP12.01□□□□□ -0.49
SMARCA4-202ENST00000413806 VSTM2AQ8TAG5 236 aa12.01□□□□□ -0.49
SMARCA4-202ENST00000413806 ZPLD1Q8TCW7 415 aa12.01□□□□□ -0.49
SMARCA4-202ENST00000413806 MRPL24Q96A35 216 aaKnown RBP12.01□□□□□ -0.49
SMARCA4-202ENST00000413806 R3HDM4Q96D70 268 aa12.01□□□□□ -0.49
SMARCA4-202ENST00000413806 TMEM167BQ9NRX6 74 aa12.01□□□□□ -0.49
SMARCA4-202ENST00000413806 ZMIZ1Q9ULJ6 1067 aa12.01□□□□□ -0.49
SMARCA4-202ENST00000413806 NRXN2Q9P2S2 1712 aa12.01□□□□□ -0.49
SMARCA4-202ENST00000413806 TRBV5-5A0A0J9YX44 114 aa12.01□□□□□ -0.49
SMARCA4-202ENST00000413806 LINC00587B1AMM8 73 aa12.01□□□□□ -0.49
SMARCA4-202ENST00000413806 HOXD4P09016 255 aaPredicted RBP12.01□□□□□ -0.49
SMARCA4-202ENST00000413806 HOXB1P14653 301 aaPredicted RBP12.01□□□□□ -0.49
SMARCA4-202ENST00000413806 MISP3Q96FF7 219 aa12.01□□□□□ -0.49
SMARCA4-202ENST00000413806 WFIKKN1Q96NZ8 548 aa12.01□□□□□ -0.49
SMARCA4-202ENST00000413806 SLC7A10Q9NS82 523 aa12.01□□□□□ -0.49
SMARCA4-202ENST00000413806 KLHDC2Q9Y2U9 406 aa12.01□□□□□ -0.49
SMARCA4-202ENST00000413806 A0A1W2PPC1 479 aa12.01□□□□□ -0.49
SMARCA4-202ENST00000413806 CYB5R3P00387 301 aaPredicted RBP12.01□□□□□ -0.49
SMARCA4-202ENST00000413806 SP1P08047 785 aa12.01□□□□□ -0.49
SMARCA4-202ENST00000413806 SOD3P08294 240 aa12.01□□□□□ -0.49
SMARCA4-202ENST00000413806 EFNB2P52799 333 aa12.01□□□□□ -0.49
SMARCA4-202ENST00000413806 HES3Q5TGS1 186 aa12.01□□□□□ -0.49
SMARCA4-202ENST00000413806 MRGPRGQ86SM5 289 aa12.01□□□□□ -0.49
SMARCA4-202ENST00000413806 ADAD2Q8NCV1 583 aaKnown RBP12.01□□□□□ -0.49
SMARCA4-202ENST00000413806 PLPPR2Q96GM1 343 aa12.01□□□□□ -0.49
SMARCA4-202ENST00000413806 SEBOXQ9HB31 216 aaPredicted RBP12.01□□□□□ -0.49
SMARCA4-202ENST00000413806 RCC2Q9P258 522 aaKnown RBP12.01□□□□□ -0.49
SMARCA4-202ENST00000413806 A0A1B0GU03 582 aa12□□□□□ -0.49
SMARCA4-202ENST00000413806 CORTO00230 105 aa12□□□□□ -0.49
SMARCA4-202ENST00000413806 GCM2O75603 506 aaPredicted RBP12□□□□□ -0.49
SMARCA4-202ENST00000413806 C1QCP02747 245 aa12□□□□□ -0.49
SMARCA4-202ENST00000413806 ANKRD34CP0C6C1 535 aa12□□□□□ -0.49
SMARCA4-202ENST00000413806 SEC11BP0C7V7 166 aa12□□□□□ -0.49
SMARCA4-202ENST00000413806 BMI1P35226 326 aa12□□□□□ -0.49
SMARCA4-202ENST00000413806 IL36GQ9NZH8 169 aa12□□□□□ -0.49
SMARCA4-202ENST00000413806 KLK13Q9UKR3 277 aa12□□□□□ -0.49
SMARCA4-202ENST00000413806 VSIG4Q9Y279 399 aa12□□□□□ -0.49
SMARCA4-202ENST00000413806 CHST1O43916 411 aa12□□□□□ -0.49
SMARCA4-202ENST00000413806 SRP14P37108 136 aaKnown RBP12□□□□□ -0.49
SMARCA4-202ENST00000413806 PIPOXQ9P0Z9 390 aa12□□□□□ -0.49
SMARCA4-202ENST00000413806 ZFP30Q9Y2G7 519 aa12□□□□□ -0.49
SMARCA4-202ENST00000413806 ZNF256Q9Y2P7 627 aaPredicted RBP12□□□□□ -0.49
SMARCA4-202ENST00000413806 M0QZ24 198 aa12□□□□□ -0.49
SMARCA4-202ENST00000413806 FUT5Q11128 374 aa12□□□□□ -0.49
SMARCA4-202ENST00000413806 SRSF9Q13242 221 aaKnown RBP eCLIP12□□□□□ -0.49
SMARCA4-202ENST00000413806 PLPPR5Q32ZL2 321 aa12□□□□□ -0.49
SMARCA4-202ENST00000413806 ZNF660Q6AZW8 331 aaPredicted RBP12□□□□□ -0.49
SMARCA4-202ENST00000413806 OR8A1Q8NGG7 326 aa12□□□□□ -0.49
SMARCA4-202ENST00000413806 WNK3Q9BYP7 1800 aa12□□□□□ -0.49
SMARCA4-202ENST00000413806 ZNF785A8K8V0 405 aa12□□□□□ -0.49
SMARCA4-202ENST00000413806 B4E171 279 aa12□□□□□ -0.49
SMARCA4-202ENST00000413806 PDE6DO43924 150 aa12□□□□□ -0.49
SMARCA4-202ENST00000413806 RPS4Y1P22090 263 aaKnown RBP12□□□□□ -0.49
SMARCA4-202ENST00000413806 EWSR1Q01844 656 aaKnown RBP eCLIP12□□□□□ -0.49
SMARCA4-202ENST00000413806 SPEM2Q0P670 501 aa12□□□□□ -0.49
SMARCA4-202ENST00000413806 TRIP6Q15654 476 aaKnown RBP12□□□□□ -0.49
SMARCA4-202ENST00000413806 TSPO2Q5TGU0 170 aa12□□□□□ -0.49
SMARCA4-202ENST00000413806 SLC35E4Q6ICL7 350 aa12□□□□□ -0.49
SMARCA4-202ENST00000413806 SMDT1Q9H4I9 107 aa12□□□□□ -0.49
SMARCA4-202ENST00000413806 TREM2Q9NZC2 230 aa12□□□□□ -0.49
SMARCA4-202ENST00000413806 OR2W1Q9Y3N9 320 aa12□□□□□ -0.49
SMARCA4-202ENST00000413806 TGIF2-C20orf24A0A0A6YYL0 155 aa12□□□□□ -0.49
SMARCA4-202ENST00000413806 A0A0U1RQV5 110 aa12□□□□□ -0.49
SMARCA4-202ENST00000413806 CD200R1LQ6Q8B3 271 aa12□□□□□ -0.49
SMARCA4-202ENST00000413806 SBF2Q86WG5 1849 aa11.99□□□□□ -0.49
SMARCA4-202ENST00000413806 OR4C46A6NHA9 309 aa11.99□□□□□ -0.49
SMARCA4-202ENST00000413806 ISLRO14498 428 aa11.99□□□□□ -0.49
SMARCA4-202ENST00000413806 PRF1P14222 555 aa11.99□□□□□ -0.49
SMARCA4-202ENST00000413806 RCC1P18754 421 aaPredicted RBP11.99□□□□□ -0.49
SMARCA4-202ENST00000413806 MAGEA5P43359 124 aa11.99□□□□□ -0.49
SMARCA4-202ENST00000413806 VAX1Q5SQQ9 334 aa11.99□□□□□ -0.49
SMARCA4-202ENST00000413806 PGA4P0DJD7 388 aa11.99□□□□□ -0.49
SMARCA4-202ENST00000413806 PGA5P0DJD9 388 aa11.99□□□□□ -0.49
SMARCA4-202ENST00000413806 WNT2BQ93097 391 aa11.99□□□□□ -0.49
SMARCA4-202ENST00000413806 TRAV38-1A0A0B4J264 116 aa11.99□□□□□ -0.49
SMARCA4-202ENST00000413806 GZMHP20718 246 aa11.99□□□□□ -0.49
SMARCA4-202ENST00000413806 MRPS11P82912 194 aaKnown RBP11.99□□□□□ -0.49
SMARCA4-202ENST00000413806 ZNF124Q15973 351 aa11.99□□□□□ -0.49
SMARCA4-202ENST00000413806 KHDC3LQ587J8 217 aa11.99□□□□□ -0.49
SMARCA4-202ENST00000413806 CCL28Q9NRJ3 127 aa11.99□□□□□ -0.49
SMARCA4-202ENST00000413806 TECRQ9NZ01 308 aaKnown RBP11.99□□□□□ -0.49
SMARCA4-202ENST00000413806 CCL4P13236 92 aa11.99□□□□□ -0.49
SMARCA4-202ENST00000413806 SOX8P57073 446 aa11.99□□□□□ -0.49
SMARCA4-202ENST00000413806 NAAAQ02083 359 aa11.99□□□□□ -0.49
SMARCA4-202ENST00000413806 SSX8Q7RTT4 187 aa11.99□□□□□ -0.49
SMARCA4-202ENST00000413806 DEFB124Q8NES8 71 aa11.99□□□□□ -0.49
SMARCA4-202ENST00000413806 HOXA6P31267 233 aa11.98□□□□□ -0.49
SMARCA4-202ENST00000413806 HERVK_113P61574 105 aa11.98□□□□□ -0.49
SMARCA4-202ENST00000413806 WDFY1Q8IWB7 410 aa11.98□□□□□ -0.49
SMARCA4-202ENST00000413806 MRPS18BQ9Y676 258 aaKnown RBP11.98□□□□□ -0.49
SMARCA4-202ENST00000413806 TMEM265A0A087WTH1 108 aa11.98□□□□□ -0.49
SMARCA4-202ENST00000413806 TSPAN2O60636 221 aa11.98□□□□□ -0.49
SMARCA4-202ENST00000413806 CFDP00746 253 aaPredicted RBP11.98□□□□□ -0.49
SMARCA4-202ENST00000413806 G6PCP35575 357 aa11.98□□□□□ -0.49
SMARCA4-202ENST00000413806 CEACAM3P40198 252 aa11.98□□□□□ -0.49
SMARCA4-202ENST00000413806 FNDC7Q5VTL7 733 aa11.98□□□□□ -0.49
SMARCA4-202ENST00000413806 SPNS3Q6ZMD2 512 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms