RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 CEACAM1P13688 526 aa12.75□□□□□ -0.37
TTC39A-208ENST00000413473 HOXB1P14653 301 aaPredicted RBP12.75□□□□□ -0.37
TTC39A-208ENST00000413473 S100GP29377 79 aa12.75□□□□□ -0.37
TTC39A-208ENST00000413473 WNT5AP41221 380 aa12.75□□□□□ -0.37
TTC39A-208ENST00000413473 GNG3P63215 75 aa12.75□□□□□ -0.37
TTC39A-208ENST00000413473 ICAM4Q14773 271 aa12.75□□□□□ -0.37
TTC39A-208ENST00000413473 ZNF573Q86YE8 665 aa12.75□□□□□ -0.37
TTC39A-208ENST00000413473 RAB39BQ96DA2 213 aa12.75□□□□□ -0.37
TTC39A-208ENST00000413473 DLL3Q9NYJ7 618 aa12.75□□□□□ -0.37
TTC39A-208ENST00000413473 H0YL77 283 aa12.74□□□□□ -0.37
TTC39A-208ENST00000413473 SCAF4O95104 1147 aaKnown RBP12.74□□□□□ -0.37
TTC39A-208ENST00000413473 JMJD7P0C870 316 aa12.74□□□□□ -0.37
TTC39A-208ENST00000413473 SMIM6P0DI80 62 aa12.74□□□□□ -0.37
TTC39A-208ENST00000413473 TAS2R30P59541 319 aa12.74□□□□□ -0.37
TTC39A-208ENST00000413473 OR2T2Q6IF00 324 aa12.74□□□□□ -0.37
TTC39A-208ENST00000413473 Q6ZRM9 215 aa12.74□□□□□ -0.37
TTC39A-208ENST00000413473 STX12Q86Y82 276 aa12.74□□□□□ -0.37
TTC39A-208ENST00000413473 THNSL2Q86YJ6 484 aa12.74□□□□□ -0.37
TTC39A-208ENST00000413473 H1FOOQ8IZA3 346 aaPredicted RBP12.74□□□□□ -0.37
TTC39A-208ENST00000413473 TMEM251Q8N6I4 163 aa12.74□□□□□ -0.37
TTC39A-208ENST00000413473 CYB561D1Q8N8Q1 229 aa12.74□□□□□ -0.37
TTC39A-208ENST00000413473 YPEL4Q96NS1 127 aa12.74□□□□□ -0.37
TTC39A-208ENST00000413473 CDX2Q99626 313 aaPredicted RBP12.74□□□□□ -0.37
TTC39A-208ENST00000413473 R4GN57 208 aa12.74□□□□□ -0.37
TTC39A-208ENST00000413473 CACNA1DQ01668 2161 aa12.74□□□□□ -0.37
TTC39A-208ENST00000413473 PRRC2CQ9Y520 2896 aaKnown RBP12.74□□□□□ -0.37
TTC39A-208ENST00000413473 TRBV6-6A0A0A6YYG2 114 aa12.74□□□□□ -0.37
TTC39A-208ENST00000413473 KIAA1324LA8MWY0 1029 aaPredicted RBP12.74□□□□□ -0.37
TTC39A-208ENST00000413473 C9orf172C9J069 976 aa12.74□□□□□ -0.37
TTC39A-208ENST00000413473 OR8U8P0C7N1 319 aa12.74□□□□□ -0.37
TTC39A-208ENST00000413473 CA6P23280 308 aa12.74□□□□□ -0.37
TTC39A-208ENST00000413473 MAS1LP35410 378 aa12.74□□□□□ -0.37
TTC39A-208ENST00000413473 TAGLN2P37802 199 aaKnown RBP12.74□□□□□ -0.37
TTC39A-208ENST00000413473 HLA-DRB3P79483 266 aa12.74□□□□□ -0.37
TTC39A-208ENST00000413473 TLE4Q04727 773 aa12.74□□□□□ -0.37
TTC39A-208ENST00000413473 P4HA3Q7Z4N8 544 aa12.74□□□□□ -0.37
TTC39A-208ENST00000413473 LINC00596Q86U02 117 aa12.74□□□□□ -0.37
TTC39A-208ENST00000413473 ZNF295-AS1Q8N0V1 137 aa12.74□□□□□ -0.37
TTC39A-208ENST00000413473 RNASE11Q8TAA1 199 aaKnown RBP12.74□□□□□ -0.37
TTC39A-208ENST00000413473 ZPBPQ9BS86 351 aa12.74□□□□□ -0.37
TTC39A-208ENST00000413473 SPRY4Q9C004 299 aa12.74□□□□□ -0.37
TTC39A-208ENST00000413473 SEBOXQ9HB31 216 aaPredicted RBP12.74□□□□□ -0.37
TTC39A-208ENST00000413473 OR1A1Q9P1Q5 309 aa12.74□□□□□ -0.37
TTC39A-208ENST00000413473 A0A1B0GU03 582 aa12.73□□□□□ -0.37
TTC39A-208ENST00000413473 APLNRP35414 380 aa12.73□□□□□ -0.37
TTC39A-208ENST00000413473 UBE2KP61086 200 aa12.73□□□□□ -0.37
TTC39A-208ENST00000413473 RPL23AP62750 156 aaKnown RBP12.73□□□□□ -0.37
TTC39A-208ENST00000413473 TMEM267Q0VDI3 215 aaPredicted RBP12.73□□□□□ -0.37
TTC39A-208ENST00000413473 HEPN1Q6WQI6 88 aa12.73□□□□□ -0.37
TTC39A-208ENST00000413473 ZNF429Q86V71 674 aa12.73□□□□□ -0.37
TTC39A-208ENST00000413473 MUCL1Q96DR8 90 aa12.73□□□□□ -0.37
TTC39A-208ENST00000413473 PRSS50Q9UI38 385 aa12.73□□□□□ -0.37
TTC39A-208ENST00000413473 MMP24Q9Y5R2 645 aa12.73□□□□□ -0.37
TTC39A-208ENST00000413473 MPC1Q9Y5U8 109 aa12.73□□□□□ -0.37
TTC39A-208ENST00000413473 WSB1Q9Y6I7 421 aa12.73□□□□□ -0.37
TTC39A-208ENST00000413473 OR5B21A6NL26 309 aa12.73□□□□□ -0.37
TTC39A-208ENST00000413473 DEGS1O15121 323 aa12.73□□□□□ -0.37
TTC39A-208ENST00000413473 TXNL1O43396 289 aa12.73□□□□□ -0.37
TTC39A-208ENST00000413473 RPS10P46783 165 aaKnown RBP12.73□□□□□ -0.37
TTC39A-208ENST00000413473 PLGLB1Q02325 96 aa12.73□□□□□ -0.37
TTC39A-208ENST00000413473 RNPS1Q15287 305 aaKnown RBP12.73□□□□□ -0.37
TTC39A-208ENST00000413473 OR8G1Q15617 311 aa12.73□□□□□ -0.37
TTC39A-208ENST00000413473 ZNF506Q5JVG8 444 aa12.73□□□□□ -0.37
TTC39A-208ENST00000413473 SPATA46Q5T0L3 261 aa12.73□□□□□ -0.37
TTC39A-208ENST00000413473 SLC25A24Q6NUK1 477 aa12.73□□□□□ -0.37
TTC39A-208ENST00000413473 ZNF880Q6PDB4 577 aa12.73□□□□□ -0.37
TTC39A-208ENST00000413473 PRR18Q8N4B5 295 aa12.73□□□□□ -0.37
TTC39A-208ENST00000413473 CLDND2Q8NHS1 167 aa12.73□□□□□ -0.37
TTC39A-208ENST00000413473 STRADBQ9C0K7 418 aa12.73□□□□□ -0.37
TTC39A-208ENST00000413473 OPA3Q9H6K4 179 aa12.73□□□□□ -0.37
TTC39A-208ENST00000413473 FOXJ2Q9P0K8 574 aa12.73□□□□□ -0.37
TTC39A-208ENST00000413473 AP4M1O00189 453 aa12.72□□□□□ -0.37
TTC39A-208ENST00000413473 ATXN7O15265 892 aaPredicted RBP12.72□□□□□ -0.37
TTC39A-208ENST00000413473 DFFBO76075 338 aa12.72□□□□□ -0.37
TTC39A-208ENST00000413473 IFNA17P01571 189 aa12.72□□□□□ -0.37
TTC39A-208ENST00000413473 DLK1P80370 383 aa12.72□□□□□ -0.37
TTC39A-208ENST00000413473 MCEMP1Q8IX19 187 aa12.72□□□□□ -0.37
TTC39A-208ENST00000413473 OR10V1Q8NGI7 309 aa12.72□□□□□ -0.37
TTC39A-208ENST00000413473 C12orf49Q9H741 205 aa12.72□□□□□ -0.37
TTC39A-208ENST00000413473 IFNA5P01569 189 aa12.72□□□□□ -0.37
TTC39A-208ENST00000413473 IGKV1-39P01597 117 aa12.72□□□□□ -0.37
TTC39A-208ENST00000413473 IGKV1D-39P04432 117 aa12.72□□□□□ -0.37
TTC39A-208ENST00000413473 HSPB1P04792 205 aaKnown RBP12.72□□□□□ -0.37
TTC39A-208ENST00000413473 CLN3Q13286 438 aa12.72□□□□□ -0.37
TTC39A-208ENST00000413473 VASH2Q86V25 355 aa12.72□□□□□ -0.37
TTC39A-208ENST00000413473 C1orf210Q8IVY1 113 aa12.72□□□□□ -0.37
TTC39A-208ENST00000413473 UBALD1Q8TB05 177 aa12.72□□□□□ -0.37
TTC39A-208ENST00000413473 RBMXL1Q96E39 390 aaKnown RBP12.72□□□□□ -0.37
TTC39A-208ENST00000413473 RAB40CQ96S21 281 aa12.72□□□□□ -0.37
TTC39A-208ENST00000413473 OR51I2Q9H344 312 aa12.72□□□□□ -0.37
TTC39A-208ENST00000413473 NIT2Q9NQR4 276 aa12.72□□□□□ -0.37
TTC39A-208ENST00000413473 COL27A1Q8IZC6 1860 aaPredicted RBP12.72□□□□□ -0.37
TTC39A-208ENST00000413473 HBE1P02100 147 aa12.71□□□□□ -0.37
TTC39A-208ENST00000413473 RAB2AP61019 212 aa12.71□□□□□ -0.37
TTC39A-208ENST00000413473 CABLES2Q9BTV7 478 aa12.71□□□□□ -0.37
TTC39A-208ENST00000413473 CACNG5Q9UF02 275 aa12.71□□□□□ -0.37
TTC39A-208ENST00000413473 PPP1R3CQ9UQK1 317 aa12.71□□□□□ -0.37
TTC39A-208ENST00000413473 ARHGAP21Q5T5U3 1957 aa12.71□□□□□ -0.37
TTC39A-208ENST00000413473 CNOT4O95628 575 aaKnown RBP12.71□□□□□ -0.38
TTC39A-208ENST00000413473 IGLV2-14P01704 120 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms