RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 HLA-HP01893 362 aa15.05■□□□□ 0
SDCBP-202ENST00000413219 PGA5P0DJD9 388 aa15.05■□□□□ 0
SDCBP-202ENST00000413219 MDH2P40926 338 aaKnown RBP15.05■□□□□ 0
SDCBP-202ENST00000413219 LRRC75BQ2VPJ9 315 aa15.05■□□□□ 0
SDCBP-202ENST00000413219 ZNF468Q5VIY5 522 aaPredicted RBP15.05■□□□□ 0
SDCBP-202ENST00000413219 ZNF324BQ6AW86 544 aaPredicted RBP15.05■□□□□ 0
SDCBP-202ENST00000413219 NEK7Q8TDX7 302 aa15.05■□□□□ 0
SDCBP-202ENST00000413219 PYGO2Q9BRQ0 406 aa15.05■□□□□ 0
SDCBP-202ENST00000413219 PLK3Q9H4B4 646 aa15.05■□□□□ 0
SDCBP-202ENST00000413219 MRPS17Q9Y2R5 130 aaKnown RBP15.05■□□□□ 0
SDCBP-202ENST00000413219 U3KQA8 63 aa15.05■□□□□ 0
SDCBP-202ENST00000413219 TRAPPC2LH3BP13 241 aa15.05■□□□□ -0
SDCBP-202ENST00000413219 H3BP45 60 aa15.05■□□□□ -0
SDCBP-202ENST00000413219 MKRN2OSH3BPM6 223 aa15.05■□□□□ -0
SDCBP-202ENST00000413219 SYNGR2O43760 224 aa15.05■□□□□ -0
SDCBP-202ENST00000413219 CXCL13O43927 109 aa15.05■□□□□ -0
SDCBP-202ENST00000413219 HBG1P69891 147 aa15.05■□□□□ -0
SDCBP-202ENST00000413219 HBG2P69892 147 aa15.05■□□□□ -0
SDCBP-202ENST00000413219 CEACAM21Q3KPI0 293 aa15.05■□□□□ -0
SDCBP-202ENST00000413219 TMEM41BQ5BJD5 291 aa15.05■□□□□ -0
SDCBP-202ENST00000413219 LCN15Q6UWW0 184 aa15.05■□□□□ -0
SDCBP-202ENST00000413219 MRPL30Q8TCC3 161 aaKnown RBP15.05■□□□□ -0
SDCBP-202ENST00000413219 ADGRG7Q96K78 797 aa15.05■□□□□ -0
SDCBP-202ENST00000413219 FGF23Q9GZV9 251 aaPredicted RBP15.05■□□□□ -0
SDCBP-202ENST00000413219 A0A087X0M5 115 aa15.04■□□□□ -0
SDCBP-202ENST00000413219 A0A1B0GX30 115 aa15.04■□□□□ -0
SDCBP-202ENST00000413219 C9J4A7 227 aa15.04■□□□□ -0
SDCBP-202ENST00000413219 TNFSF12O43508 249 aa15.04■□□□□ -0
SDCBP-202ENST00000413219 IL2RGP31785 369 aa15.04■□□□□ -0
SDCBP-202ENST00000413219 JOSD1Q15040 202 aaPredicted RBP15.04■□□□□ -0
SDCBP-202ENST00000413219 LBHQ53QV2 105 aaPredicted RBP15.04■□□□□ -0
SDCBP-202ENST00000413219 WDR25Q64LD2 544 aaPredicted RBP15.04■□□□□ -0
SDCBP-202ENST00000413219 ZNF880Q6PDB4 577 aa15.04■□□□□ -0
SDCBP-202ENST00000413219 ZDHHC23Q8IYP9 409 aa15.04■□□□□ -0
SDCBP-202ENST00000413219 CPEB3Q8NE35 698 aaKnown RBP15.04■□□□□ -0
SDCBP-202ENST00000413219 SGCZQ96LD1 299 aa15.04■□□□□ -0
SDCBP-202ENST00000413219 OCIAD1Q9NX40 245 aa15.04■□□□□ -0
SDCBP-202ENST00000413219 NAT8Q9UHE5 227 aa15.04■□□□□ -0
SDCBP-202ENST00000413219 ASCC3Q8N3C0 2202 aaKnown RBP15.04■□□□□ -0
SDCBP-202ENST00000413219 EPHA8P29322 1005 aaPredicted RBP15.04■□□□□ -0
SDCBP-202ENST00000413219 IL11RAQ14626 422 aa15.04■□□□□ -0
SDCBP-202ENST00000413219 COA6Q5JTJ3 125 aaKnown RBP15.04■□□□□ -0
SDCBP-202ENST00000413219 YRDCQ86U90 279 aaKnown RBP15.04■□□□□ -0
SDCBP-202ENST00000413219 TGIF2LYQ8IUE0 185 aa15.04■□□□□ -0
SDCBP-202ENST00000413219 OR4X1Q8NH49 305 aa15.04■□□□□ -0
SDCBP-202ENST00000413219 RNASE11Q8TAA1 199 aaKnown RBP15.04■□□□□ -0
SDCBP-202ENST00000413219 CLDN23Q96B33 292 aa15.04■□□□□ -0
SDCBP-202ENST00000413219 ZNF845Q96IR2 970 aaPredicted RBP15.04■□□□□ -0
SDCBP-202ENST00000413219 SNX22Q96L94 193 aa15.04■□□□□ -0
SDCBP-202ENST00000413219 HS3ST6Q96QI5 342 aa15.04■□□□□ -0
SDCBP-202ENST00000413219 VSIRQ9H7M9 311 aa15.04■□□□□ -0
SDCBP-202ENST00000413219 PSENENQ9NZ42 101 aa15.04■□□□□ -0
SDCBP-202ENST00000413219 MTCH1Q9NZJ7 389 aa15.04■□□□□ -0
SDCBP-202ENST00000413219 RANBP2P49792 3224 aaKnown RBP15.03■□□□□ -0
SDCBP-202ENST00000413219 CEBPZOSA8MTT3 80 aa15.03■□□□□ -0
SDCBP-202ENST00000413219 PSG2P11465 335 aa15.03■□□□□ -0
SDCBP-202ENST00000413219 GPM6AP51674 278 aa15.03■□□□□ -0
SDCBP-202ENST00000413219 C4orf17Q53FE4 359 aa15.03■□□□□ -0
SDCBP-202ENST00000413219 CYP2G1PQ6ZSU1 146 aa15.03■□□□□ -0
SDCBP-202ENST00000413219 OR10J5Q8NHC4 309 aa15.03■□□□□ -0
SDCBP-202ENST00000413219 TMEM45BQ96B21 275 aa15.03■□□□□ -0
SDCBP-202ENST00000413219 GPR87Q9BY21 358 aa15.03■□□□□ -0
SDCBP-202ENST00000413219 BRWD1Q9NSI6 2320 aa15.03■□□□□ -0
SDCBP-202ENST00000413219 MAP1LC3B2A6NCE7 125 aa15.02■□□□□ -0
SDCBP-202ENST00000413219 CD300LBA8K4G0 201 aa15.02■□□□□ -0
SDCBP-202ENST00000413219 NPIPB11E5RHQ5 1161 aa15.02■□□□□ -0
SDCBP-202ENST00000413219 PFN1P07737 140 aaKnown RBP15.02■□□□□ -0
SDCBP-202ENST00000413219 FGF7P21781 194 aa15.02■□□□□ -0
SDCBP-202ENST00000413219 SSX7Q7RTT5 188 aa15.02■□□□□ -0
SDCBP-202ENST00000413219 CENPVQ7Z7K6 275 aaPredicted RBP15.02■□□□□ -0
SDCBP-202ENST00000413219 AGBL5Q8NDL9 886 aa15.02■□□□□ -0
SDCBP-202ENST00000413219 OR10D3Q8NH80 312 aa15.02■□□□□ -0
SDCBP-202ENST00000413219 SSX3Q99909 188 aa15.02■□□□□ -0
SDCBP-202ENST00000413219 MAP1LC3BQ9GZQ8 125 aa15.02■□□□□ -0
SDCBP-202ENST00000413219 DEGS1O15121 323 aa15.02□□□□□ -0.01
SDCBP-202ENST00000413219 SLC31A2O15432 143 aa15.02□□□□□ -0.01
SDCBP-202ENST00000413219 CYTIPO60759 359 aa15.02□□□□□ -0.01
SDCBP-202ENST00000413219 FGF8P55075 233 aaPredicted RBP15.02□□□□□ -0.01
SDCBP-202ENST00000413219 ARL16Q0P5N6 197 aa15.02□□□□□ -0.01
SDCBP-202ENST00000413219 Q6ZRM9 215 aa15.02□□□□□ -0.01
SDCBP-202ENST00000413219 OR5A2Q8NGI9 324 aa15.02□□□□□ -0.01
SDCBP-202ENST00000413219 OR51H1Q8NH63 302 aa15.02□□□□□ -0.01
SDCBP-202ENST00000413219 STRADBQ9C0K7 418 aa15.02□□□□□ -0.01
SDCBP-202ENST00000413219 WDR61Q9GZS3 305 aaKnown RBP15.02□□□□□ -0.01
SDCBP-202ENST00000413219 SMOC1Q9H4F8 434 aa15.02□□□□□ -0.01
SDCBP-202ENST00000413219 IL36RNQ9UBH0 155 aa15.02□□□□□ -0.01
SDCBP-202ENST00000413219 CACNG5Q9UF02 275 aa15.02□□□□□ -0.01
SDCBP-202ENST00000413219 TIMM9Q9Y5J7 89 aa15.02□□□□□ -0.01
SDCBP-202ENST00000413219 SZT2Q5T011 3432 aa15.01□□□□□ -0.01
SDCBP-202ENST00000413219 TNRC6BQ9UPQ9 1833 aaKnown RBP15.01□□□□□ -0.01
SDCBP-202ENST00000413219 KLF7O75840 302 aaPredicted RBP15.01□□□□□ -0.01
SDCBP-202ENST00000413219 FOSL1P15407 271 aa15.01□□□□□ -0.01
SDCBP-202ENST00000413219 TAS2R60P59551 318 aa15.01□□□□□ -0.01
SDCBP-202ENST00000413219 CLN3Q13286 438 aa15.01□□□□□ -0.01
SDCBP-202ENST00000413219 NCR3LG1Q68D85 454 aa15.01□□□□□ -0.01
SDCBP-202ENST00000413219 MRPL21Q7Z2W9 205 aaKnown RBP15.01□□□□□ -0.01
SDCBP-202ENST00000413219 HAPLN4Q86UW8 402 aa15.01□□□□□ -0.01
SDCBP-202ENST00000413219 OR10V1Q8NGI7 309 aa15.01□□□□□ -0.01
SDCBP-202ENST00000413219 OR1P1Q8NH06 330 aa15.01□□□□□ -0.01
SDCBP-202ENST00000413219 MEGF10Q96KG7 1140 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms