RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 MIEN1Q9BRT3 115 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 WIPI2Q9Y4P8 454 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 TGFBR3LH3BV60 316 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 MRPL33O75394 65 aaKnown RBP12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 DMWDQ09019 674 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 RTP5Q14D33 572 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 WDR73Q6P4I2 378 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 ZDHHC23Q8IYP9 409 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 OR1K1Q8NGR3 316 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 BADQ92934 168 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 MRGPRFQ96AM1 343 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 C18orf12Q96KH6 178 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 CLCF1Q9UBD9 225 aa12.06□□□□□ -0.48
CLTCL1-201ENST00000412649 NUBP1P53384 320 aa12.05□□□□□ -0.48
CLTCL1-201ENST00000412649 SPATA45Q537H7 98 aa12.05□□□□□ -0.48
CLTCL1-201ENST00000412649 GPHA2Q96T91 129 aa12.05□□□□□ -0.48
CLTCL1-201ENST00000412649 SPTY2D1-AS1A0A0U1RR47 76 aa12.05□□□□□ -0.48
CLTCL1-201ENST00000412649 SNURFLB1AK76 121 aa12.05□□□□□ -0.48
CLTCL1-201ENST00000412649 LINC00614P0C842 121 aa12.05□□□□□ -0.48
CLTCL1-201ENST00000412649 CSRP1P21291 193 aaKnown RBP12.05□□□□□ -0.48
CLTCL1-201ENST00000412649 IER3P46695 156 aa12.05□□□□□ -0.48
CLTCL1-201ENST00000412649 OR1D5P58170 312 aa12.05□□□□□ -0.48
CLTCL1-201ENST00000412649 PARM1Q6UWI2 310 aa12.05□□□□□ -0.48
CLTCL1-201ENST00000412649 DMRTC2Q8IXT2 367 aaPredicted RBP12.05□□□□□ -0.48
CLTCL1-201ENST00000412649 CEACAM18A8MTB9 384 aa12.05□□□□□ -0.48
CLTCL1-201ENST00000412649 OR4A8P0C604 315 aa12.05□□□□□ -0.48
CLTCL1-201ENST00000412649 OR5G3P0C626 314 aa12.05□□□□□ -0.48
CLTCL1-201ENST00000412649 GPM6AP51674 278 aa12.05□□□□□ -0.48
CLTCL1-201ENST00000412649 QRFPP83859 136 aa12.05□□□□□ -0.48
CLTCL1-201ENST00000412649 SRYQ05066 204 aa12.05□□□□□ -0.48
CLTCL1-201ENST00000412649 MTCH2Q9Y6C9 303 aa12.05□□□□□ -0.48
CLTCL1-201ENST00000412649 GRIFINA4D1Z8 144 aa12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 H0Y980 276 aa12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 PSG2P11465 335 aa12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 THBS3P49746 956 aa12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 LCN2P80188 198 aa12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 ZNF816Q0VGE8 651 aaPredicted RBP12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 ASPHD2Q6ICH7 369 aa12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 FAM89BQ8N5H3 189 aa12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 TAF15Q92804 592 aaKnown RBP eCLIP12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 PSMG3Q9BT73 122 aaPredicted RBP12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 TMEM208Q9BTX3 173 aa12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 MDC1Q14676 2089 aaKnown RBP12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 A0A1B0GWJ7 208 aa12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 NXPH2O95156 264 aa12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 F2RP25116 425 aa12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 OTX2P32243 289 aa12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 OR6C3Q9NZP0 311 aa12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 IGKV1D-8A0A087WSZ0 117 aa12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 RPL36A-HNRNPH2H7BZ11 118 aa12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 CD99P14209 185 aa12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 BRS3P32247 399 aa12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 ALKBH3Q96Q83 286 aaPredicted RBP12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 PLXNA4Q9HCM2 1894 aa12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 LILRA5A6NI73 299 aa12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 AQP7P3A6NL99 342 aa12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 H0Y8G0 127 aa12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 MPLP40238 635 aa12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 RBM11P57052 281 aaKnown RBP12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 C1orf194Q5T5A4 169 aa12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 OR4C12Q96R67 309 aa12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 WDR61Q9GZS3 305 aaKnown RBP12.04□□□□□ -0.48
CLTCL1-201ENST00000412649 SCRG1O75711 98 aa12.03□□□□□ -0.48
CLTCL1-201ENST00000412649 CA3P07451 260 aa12.03□□□□□ -0.48
CLTCL1-201ENST00000412649 COX5BP10606 129 aa12.03□□□□□ -0.48
CLTCL1-201ENST00000412649 HINT1P49773 126 aaPredicted RBP12.03□□□□□ -0.48
CLTCL1-201ENST00000412649 ALKBH2Q6NS38 261 aa12.03□□□□□ -0.48
CLTCL1-201ENST00000412649 SYT13Q7L8C5 426 aa12.03□□□□□ -0.48
CLTCL1-201ENST00000412649 OR5D13Q8NGL4 314 aa12.03□□□□□ -0.48
CLTCL1-201ENST00000412649 ADIPOR1Q96A54 375 aa12.03□□□□□ -0.48
CLTCL1-201ENST00000412649 PARD6GQ9BYG4 376 aaPredicted RBP12.03□□□□□ -0.48
CLTCL1-201ENST00000412649 NPIPB13A6NJU9 1138 aa12.03□□□□□ -0.48
CLTCL1-201ENST00000412649 NPIPB4C9JG80 1138 aa12.03□□□□□ -0.48
CLTCL1-201ENST00000412649 SIRPB1O00241 398 aa12.03□□□□□ -0.48
CLTCL1-201ENST00000412649 ZNF32P17041 273 aa12.03□□□□□ -0.48
CLTCL1-201ENST00000412649 GCH1P30793 250 aa12.03□□□□□ -0.48
CLTCL1-201ENST00000412649 TGFBR3Q03167 851 aa12.03□□□□□ -0.48
CLTCL1-201ENST00000412649 PRAMEF5Q5TYX0 476 aa12.03□□□□□ -0.48
CLTCL1-201ENST00000412649 PRAMEF6Q5VXH4 476 aa12.03□□□□□ -0.48
CLTCL1-201ENST00000412649 OR10G3Q8NGC4 313 aa12.03□□□□□ -0.48
CLTCL1-201ENST00000412649 UBALD1Q8TB05 177 aa12.03□□□□□ -0.48
CLTCL1-201ENST00000412649 RFNGQ9Y644 331 aa12.03□□□□□ -0.48
CLTCL1-201ENST00000412649 IGHV3-9P01782 118 aa12.03□□□□□ -0.48
CLTCL1-201ENST00000412649 LRRC61Q9BV99 259 aa12.03□□□□□ -0.48
CLTCL1-201ENST00000412649 SNHG12Q9BXW3 62 aa12.03□□□□□ -0.48
CLTCL1-201ENST00000412649 RNF24Q9Y225 148 aa12.03□□□□□ -0.48
CLTCL1-201ENST00000412649 TDGF1P3P51864 188 aa12.03□□□□□ -0.48
CLTCL1-201ENST00000412649 HGFACQ04756 655 aa12.03□□□□□ -0.48
CLTCL1-201ENST00000412649 SLC25A47Q6Q0C1 308 aa12.03□□□□□ -0.48
CLTCL1-201ENST00000412649 LRTM2Q8N967 370 aa12.03□□□□□ -0.48
CLTCL1-201ENST00000412649 GPR146Q96CH1 333 aa12.03□□□□□ -0.48
CLTCL1-201ENST00000412649 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.02□□□□□ -0.48
CLTCL1-201ENST00000412649 SHISA7A6NL88 538 aa12.02□□□□□ -0.48
CLTCL1-201ENST00000412649 NDUFB4O95168 129 aa12.02□□□□□ -0.48
CLTCL1-201ENST00000412649 RPL23P62829 140 aaKnown RBP12.02□□□□□ -0.48
CLTCL1-201ENST00000412649 FNDC7Q5VTL7 733 aa12.02□□□□□ -0.48
CLTCL1-201ENST00000412649 ZNF573Q86YE8 665 aa12.02□□□□□ -0.48
CLTCL1-201ENST00000412649 LYPD6BQ8NI32 183 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms