RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 RXFP4Q8TDU9 374 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 SNX33Q8WV41 574 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 TNFAIP8L1Q8WVP5 186 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 RGP1Q92546 391 aaPredicted RBP4.46□□□□□ -1.7
LINC00342-201ENST00000412393 GTF3AQ92664 365 aaKnown RBP4.46□□□□□ -1.7
LINC00342-201ENST00000412393 SLC25A28Q96A46 364 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 SEH1LQ96EE3 360 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 GINS4Q9BRT9 223 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 ALG12Q9BV10 488 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 TINAGL1Q9GZM7 467 aaPredicted RBP4.46□□□□□ -1.7
LINC00342-201ENST00000412393 FXYD6Q9H0Q3 95 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 OR51B6Q9H340 312 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 CYTL1Q9NRR1 136 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 TMEM160Q9NX00 188 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 LPAR3Q9UBY5 353 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 KCNS2Q9ULS6 477 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 FZR1Q9UM11 496 aa4.46□□□□□ -1.7
LINC00342-201ENST00000412393 ARHGAP32A7KAX9 2087 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 IGKV1D-43A0A0B4J1Z2 117 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 LRP5LA4QPB2 252 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 A6NIZ1 184 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 C1orf196B1AJZ1 125 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 LYNX1G3V0Z9 82 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 GPR31O00270 319 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 GOSR2O14653 212 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 SCGNO76038 276 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 SIX6O95475 246 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 PPP1R3DO95685 299 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 TGFAP01135 160 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 GAPDHP04406 335 aaKnown RBP4.45□□□□□ -1.7
LINC00342-201ENST00000412393 LYNX1P0DP58 116 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 ZNF44P15621 663 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 CCNOP22674 350 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 PSMB6P28072 239 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 LAP3P28838 519 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 RPL4P36578 427 aaKnown RBP4.45□□□□□ -1.7
LINC00342-201ENST00000412393 GUCA1AP43080 201 aaPredicted RBP4.45□□□□□ -1.7
LINC00342-201ENST00000412393 HTR5AP47898 357 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 KCNJ3P48549 501 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 DVL1P1P54792 670 aaPredicted RBP4.45□□□□□ -1.7
LINC00342-201ENST00000412393 KLF3P57682 345 aaPredicted RBP4.45□□□□□ -1.7
LINC00342-201ENST00000412393 PROK1P58294 105 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 BPIFB3P59826 476 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 RAP1BP61224 184 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 RAP1AP62834 184 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 DEFA6Q01524 100 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 DHRS2Q13268 280 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 ALKBH1Q13686 389 aaKnown RBP4.45□□□□□ -1.7
LINC00342-201ENST00000412393 SSX2Q16385 188 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 SRSF7Q16629 238 aaKnown RBP eCLIP4.45□□□□□ -1.7
LINC00342-201ENST00000412393 C21orf62-AS1Q17RA5 79 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 PCGF3Q3KNV8 242 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 THEM4Q5T1C6 240 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 FAM27BQ5VT28 67 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 BTNL8Q6UX41 500 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 SSX6Q7RTT6 188 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 LYG2Q86SG7 212 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 THNSL2Q86YJ6 484 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 PNLDC1Q8NA58 520 aaKnown RBP4.45□□□□□ -1.7
LINC00342-201ENST00000412393 LRRC75AQ8NAA5 344 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 INO80EQ8NBZ0 244 aaPredicted RBP4.45□□□□□ -1.7
LINC00342-201ENST00000412393 OR51S1Q8NGJ8 323 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 OR4A4PQ8NGN8 299 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 OR1J1Q8NGS3 322 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 OR13C2Q8NGS9 318 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 AKR7LQ8NHP1 331 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 ZNF519Q8TB69 540 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 TCTEX1D2Q8WW35 142 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 C11orf40Q8WZ69 217 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 RDH5Q92781 318 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 NABP1Q96AH0 204 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 MSI2Q96DH6 328 aaKnown RBP4.45□□□□□ -1.7
LINC00342-201ENST00000412393 AQP10Q96PS8 301 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 TSPAN32Q96QS1 320 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 PRRT1Q99946 306 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 NRIP2Q9BQI9 281 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 RNF126Q9BV68 326 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 PAPOLGQ9BWT3 736 aaKnown RBP4.45□□□□□ -1.7
LINC00342-201ENST00000412393 BCL2L14Q9BZR8 327 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 ARV1Q9H2C2 271 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 MED20Q9H944 212 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 CHODLQ9H9P2 273 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 BEX1Q9HBH7 125 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 PARP11Q9NR21 331 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 COMMD9Q9P000 198 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 TAAR3PQ9P1P4 343 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 ANAPC10Q9UM13 185 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 STARD10Q9Y365 291 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 TMED3Q9Y3Q3 217 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 TMEM14AQ9Y6G1 99 aa4.45□□□□□ -1.7
LINC00342-201ENST00000412393 IGLV3-9A0A075B6K5 115 aa4.44□□□□□ -1.7
LINC00342-201ENST00000412393 C9orf170A2RU37 121 aa4.44□□□□□ -1.7
LINC00342-201ENST00000412393 C5orf49A4QMS7 147 aa4.44□□□□□ -1.7
LINC00342-201ENST00000412393 C17orf100A8MU93 164 aa4.44□□□□□ -1.7
LINC00342-201ENST00000412393 RNASEK-C17orf49H0YIS7 233 aa4.44□□□□□ -1.7
LINC00342-201ENST00000412393 H7C1C5 153 aa4.44□□□□□ -1.7
LINC00342-201ENST00000412393 AP4M1O00189 453 aa4.44□□□□□ -1.7
LINC00342-201ENST00000412393 XKRYO14609 159 aa4.44□□□□□ -1.7
LINC00342-201ENST00000412393 PPIHO43447 177 aaKnown RBP4.44□□□□□ -1.7
LINC00342-201ENST00000412393 RAB3DO95716 219 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms