RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 HMGN3Q15651 99 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 LYG2Q86SG7 212 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 ADAD2Q8NCV1 583 aaKnown RBP4.62□□□□□ -1.67
EPHA4-202ENST00000409854 OR4A4PQ8NGN8 299 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 NEK7Q8TDX7 302 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 FYTTD1Q96QD9 318 aaKnown RBP4.62□□□□□ -1.67
EPHA4-202ENST00000409854 SHARPINQ9H0F6 387 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 GSN-AS1Q9NRJ2 163 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 MED9Q9NWA0 146 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 CACNA1DQ01668 2161 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 RFPL4AA6NLU0 287 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 RFPL4AL1F8VTS6 287 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 SSNA1O43805 119 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 NDUFS6O75380 124 aaKnown RBP4.62□□□□□ -1.67
EPHA4-202ENST00000409854 CTSDP07339 412 aaPredicted RBP4.62□□□□□ -1.67
EPHA4-202ENST00000409854 SCTP09683 121 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 CTXN2P0C2S0 81 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 COL10A1Q03692 680 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 PPP1R1AQ13522 171 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 STUMQ69YW2 141 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 TMED4Q7Z7H5 227 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 NOXA1Q86UR1 476 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 OR5T1Q8NG75 326 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 COQ2Q96H96 371 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 LURAP1Q96LR2 239 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 OR14J1Q9UGF5 321 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 METRNQ9UJH8 293 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 USP24Q9UPU5 2620 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 COL6A6A6NMZ7 2263 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 HIVEP3Q5T1R4 2406 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 TRBV6-7A0A0A0MS04 114 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 TMEM30CPA0ZSE6 113 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 C9orf170A2RU37 121 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 OR2A4O95047 310 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 IFNA10P01566 189 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 ANXA3P12429 323 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 HLA-GP17693 338 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 PRDX2P32119 198 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 GMFBP60983 142 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 ATXN7L3Q14CW9 347 aaPredicted RBP4.62□□□□□ -1.67
EPHA4-202ENST00000409854 TMEM128Q5BJH2 165 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 OR2AK2Q8NG84 335 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 OR11L1Q8NGX0 322 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 MITD1Q8WV92 249 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 SDSLQ96GA7 329 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 BBC3Q96PG8 261 aaPredicted RBP4.62□□□□□ -1.67
EPHA4-202ENST00000409854 OR2A7Q96R45 310 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 TOLLIPQ9H0E2 274 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 MS4A5Q9H3V2 200 aa4.62□□□□□ -1.67
EPHA4-202ENST00000409854 CISD1Q9NZ45 108 aaKnown RBP4.62□□□□□ -1.67
EPHA4-202ENST00000409854 A0A0B4J2A0 478 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 IGHV2-70P01814 119 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 HLA-AP01891 365 aaKnown RBP4.61□□□□□ -1.67
EPHA4-202ENST00000409854 C1QBP02746 253 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 MUC1P15941 1255 aaPredicted RBP4.61□□□□□ -1.67
EPHA4-202ENST00000409854 RCC1P18754 421 aaPredicted RBP4.61□□□□□ -1.67
EPHA4-202ENST00000409854 FCGR2CP31995 323 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 RBMXP38159 391 aaKnown RBP4.61□□□□□ -1.67
EPHA4-202ENST00000409854 GLP1RP43220 463 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 PPOXP50336 477 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 SUPT4H1P63272 117 aaKnown RBP4.61□□□□□ -1.67
EPHA4-202ENST00000409854 SRSF4Q08170 494 aaKnown RBP4.61□□□□□ -1.67
EPHA4-202ENST00000409854 HNF4GQ14541 408 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 C21orf62-AS1Q17RA5 79 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 CR1LQ2VPA4 569 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 EIF4E3Q8N5X7 224 aaKnown RBP4.61□□□□□ -1.67
EPHA4-202ENST00000409854 ASB13Q8WXK3 278 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 PIK3IP1Q96FE7 263 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 SNX22Q96L94 193 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 RSRP1Q9BUV0 290 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 ZNF436Q9C0F3 470 aaPredicted RBP4.61□□□□□ -1.67
EPHA4-202ENST00000409854 EGLN1Q9GZT9 426 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 SLC23A1Q9UHI7 598 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 SHPKQ9UHJ6 478 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 PPP1R3CQ9UQK1 317 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 G3V3Q6 166 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 NUPL2O15504 423 aaKnown RBP4.61□□□□□ -1.67
EPHA4-202ENST00000409854 SFT2D2O95562 160 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 DUS4LO95620 317 aaKnown RBP4.61□□□□□ -1.67
EPHA4-202ENST00000409854 PPYP01298 95 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 TFF1P04155 84 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 GIPP09681 153 aaPredicted RBP4.61□□□□□ -1.67
EPHA4-202ENST00000409854 AADACP22760 399 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 CD80P33681 288 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 CCL8P80075 99 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 TUSC1Q2TAM9 212 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 RNF212Q495C1 297 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 DNLZQ5SXM8 178 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 C11orf71Q6IPW1 123 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 C5orf24Q7Z6I8 188 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 H1FOOQ8IZA3 346 aaPredicted RBP4.61□□□□□ -1.67
EPHA4-202ENST00000409854 ZNF561Q8N587 486 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 C12orf45Q8N5I9 185 aaPredicted RBP4.61□□□□□ -1.67
EPHA4-202ENST00000409854 PDCD10Q9BUL8 212 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 RANBP3Q9H6Z4 567 aaPredicted RBP4.61□□□□□ -1.67
EPHA4-202ENST00000409854 METTL8Q9H825 291 aaKnown RBP4.61□□□□□ -1.67
EPHA4-202ENST00000409854 SAP30LQ9HAJ7 183 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 DLL4Q9NR61 685 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 PIPOXQ9P0Z9 390 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 MGAT4CQ9UBM8 478 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms