RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 ZNF71Q9NQZ8 489 aaPredicted RBP16.87■□□□□ 0.29
LIMS2-207ENST00000409808 FAM24AA6NFZ4 105 aa16.86■□□□□ 0.29
LIMS2-207ENST00000409808 K7ENP7 123 aa16.86■□□□□ 0.29
LIMS2-207ENST00000409808 EIF3GO75821 320 aaKnown RBP eCLIP16.86■□□□□ 0.29
LIMS2-207ENST00000409808 SMIM6P0DI80 62 aa16.86■□□□□ 0.29
LIMS2-207ENST00000409808 NPBWR2P48146 333 aa16.86■□□□□ 0.29
LIMS2-207ENST00000409808 PDCD1Q15116 288 aa16.86■□□□□ 0.29
LIMS2-207ENST00000409808 INO80CQ6PI98 192 aaPredicted RBP16.86■□□□□ 0.29
LIMS2-207ENST00000409808 OR2G3Q8NGZ4 309 aa16.86■□□□□ 0.29
LIMS2-207ENST00000409808 GTF3AQ92664 365 aaKnown RBP16.86■□□□□ 0.29
LIMS2-207ENST00000409808 GNPNAT1Q96EK6 184 aaPredicted RBP16.86■□□□□ 0.29
LIMS2-207ENST00000409808 RAB5AP20339 215 aa16.86■□□□□ 0.29
LIMS2-207ENST00000409808 CCNOP22674 350 aa16.86■□□□□ 0.29
LIMS2-207ENST00000409808 MKXQ8IYA7 352 aa16.86■□□□□ 0.29
LIMS2-207ENST00000409808 TCEAL7Q9BRU2 100 aa16.86■□□□□ 0.29
LIMS2-207ENST00000409808 TUSC2O75896 110 aa16.85■□□□□ 0.29
LIMS2-207ENST00000409808 C1QL1O75973 258 aa16.85■□□□□ 0.29
LIMS2-207ENST00000409808 S100A9P06702 114 aaKnown RBP16.85■□□□□ 0.29
LIMS2-207ENST00000409808 VDAC1P21796 283 aa16.85■□□□□ 0.29
LIMS2-207ENST00000409808 UCP1P25874 307 aa16.85■□□□□ 0.29
LIMS2-207ENST00000409808 AKR1C3P42330 323 aa16.85■□□□□ 0.29
LIMS2-207ENST00000409808 FOXF2Q12947 444 aa16.85■□□□□ 0.29
LIMS2-207ENST00000409808 ACSF3Q4G176 576 aaPredicted RBP16.85■□□□□ 0.29
LIMS2-207ENST00000409808 SPIN3Q5JUX0 258 aa16.85■□□□□ 0.29
LIMS2-207ENST00000409808 TMEM252Q8N6L7 170 aa16.85■□□□□ 0.29
LIMS2-207ENST00000409808 GP6Q9HCN6 339 aa16.85■□□□□ 0.29
LIMS2-207ENST00000409808 METTL1Q9UBP6 276 aaKnown RBP16.85■□□□□ 0.29
LIMS2-207ENST00000409808 FBXO7Q9Y3I1 522 aa16.85■□□□□ 0.29
LIMS2-207ENST00000409808 IGSF23A1L1A6 192 aa16.85■□□□□ 0.29
LIMS2-207ENST00000409808 ZNF732B4DXR9 585 aa16.85■□□□□ 0.29
LIMS2-207ENST00000409808 ATP6V0CP27449 155 aa16.85■□□□□ 0.29
LIMS2-207ENST00000409808 ID3Q02535 119 aa16.85■□□□□ 0.29
LIMS2-207ENST00000409808 PRDX4Q13162 271 aa16.85■□□□□ 0.29
LIMS2-207ENST00000409808 CEACAM21Q3KPI0 293 aa16.85■□□□□ 0.29
LIMS2-207ENST00000409808 SOHLH1Q5JUK2 328 aa16.85■□□□□ 0.29
LIMS2-207ENST00000409808 VWA1Q6PCB0 445 aa16.85■□□□□ 0.29
LIMS2-207ENST00000409808 FAM214BQ7L5A3 538 aa16.85■□□□□ 0.29
LIMS2-207ENST00000409808 LINC00596Q86U02 117 aa16.85■□□□□ 0.29
LIMS2-207ENST00000409808 SUMF2Q8NBJ7 301 aa16.85■□□□□ 0.29
LIMS2-207ENST00000409808 CD300LFQ8TDQ1 290 aa16.85■□□□□ 0.29
LIMS2-207ENST00000409808 HIPK2Q9H2X6 1198 aa16.85■□□□□ 0.29
LIMS2-207ENST00000409808 DKK4Q9UBT3 224 aa16.85■□□□□ 0.29
LIMS2-207ENST00000409808 RAXQ9Y2V3 346 aa16.85■□□□□ 0.29
LIMS2-207ENST00000409808 BCL3P20749 454 aa16.84■□□□□ 0.29
LIMS2-207ENST00000409808 SULT1A1P50225 295 aa16.84■□□□□ 0.29
LIMS2-207ENST00000409808 POLR2GP62487 172 aaKnown RBP eCLIP16.84■□□□□ 0.29
LIMS2-207ENST00000409808 CMTM1Q8IZ96 169 aa16.84■□□□□ 0.29
LIMS2-207ENST00000409808 OR1K1Q8NGR3 316 aa16.84■□□□□ 0.29
LIMS2-207ENST00000409808 PLK3Q9H4B4 646 aa16.84■□□□□ 0.29
LIMS2-207ENST00000409808 INTS1Q8N201 2190 aaKnown RBP16.84■□□□□ 0.29
LIMS2-207ENST00000409808 RBFOX3A6NFN3 312 aa16.84■□□□□ 0.29
LIMS2-207ENST00000409808 ZNF14P17017 642 aaPredicted RBP16.84■□□□□ 0.29
LIMS2-207ENST00000409808 KIR2DL2P43627 348 aaPredicted RBP16.84■□□□□ 0.29
LIMS2-207ENST00000409808 GUSBP1Q15486 140 aa16.84■□□□□ 0.29
LIMS2-207ENST00000409808 KRBOX4Q5JUW0 171 aa16.84■□□□□ 0.29
LIMS2-207ENST00000409808 DPPA3Q6W0C5 159 aa16.84■□□□□ 0.29
LIMS2-207ENST00000409808 ZDHHC23Q8IYP9 409 aa16.84■□□□□ 0.29
LIMS2-207ENST00000409808 OR56B2PQ8NGI1 322 aa16.84■□□□□ 0.29
LIMS2-207ENST00000409808 OR5D13Q8NGL4 314 aa16.84■□□□□ 0.29
LIMS2-207ENST00000409808 ATP23Q9Y6H3 246 aa16.84■□□□□ 0.29
LIMS2-207ENST00000409808 A0A1W2PR80 420 aa16.83■□□□□ 0.28
LIMS2-207ENST00000409808 ACAA1P09110 424 aaPredicted RBP16.83■□□□□ 0.28
LIMS2-207ENST00000409808 S100GP29377 79 aa16.83■□□□□ 0.28
LIMS2-207ENST00000409808 PPP1CCP36873 323 aaKnown RBP16.83■□□□□ 0.28
LIMS2-207ENST00000409808 NMSQ5H8A3 153 aa16.83■□□□□ 0.28
LIMS2-207ENST00000409808 BCL2L2Q92843 193 aaPredicted RBP16.83■□□□□ 0.28
LIMS2-207ENST00000409808 KIAA1456Q9P272 454 aa16.83■□□□□ 0.28
LIMS2-207ENST00000409808 RP1L1Q8IWN7 2480 aaPredicted RBP16.83■□□□□ 0.28
LIMS2-207ENST00000409808 ZZEF1O43149 2961 aa16.83■□□□□ 0.28
LIMS2-207ENST00000409808 A0A1W2PPH5 198 aa16.82■□□□□ 0.28
LIMS2-207ENST00000409808 C5orf49A4QMS7 147 aa16.82■□□□□ 0.28
LIMS2-207ENST00000409808 ADAM20O43506 726 aa16.82■□□□□ 0.28
LIMS2-207ENST00000409808 OR8G1Q15617 311 aa16.82■□□□□ 0.28
LIMS2-207ENST00000409808 ZNF818PQ6ZRF7 136 aa16.82■□□□□ 0.28
LIMS2-207ENST00000409808 MRPL21Q7Z2W9 205 aaKnown RBP16.82■□□□□ 0.28
LIMS2-207ENST00000409808 C1QL4Q86Z23 238 aa16.82■□□□□ 0.28
LIMS2-207ENST00000409808 GAPTQ8N292 157 aa16.82■□□□□ 0.28
LIMS2-207ENST00000409808 SLAMF9Q96A28 289 aa16.82■□□□□ 0.28
LIMS2-207ENST00000409808 APOBEC3DQ96AK3 386 aaPredicted RBP16.82■□□□□ 0.28
LIMS2-207ENST00000409808 OPA3Q9H6K4 179 aa16.82■□□□□ 0.28
LIMS2-207ENST00000409808 GLRX2Q9NS18 164 aa16.82■□□□□ 0.28
LIMS2-207ENST00000409808 A6NLC8 198 aa16.82■□□□□ 0.28
LIMS2-207ENST00000409808 AHRRA9YTQ3 701 aa16.82■□□□□ 0.28
LIMS2-207ENST00000409808 H0Y980 276 aa16.82■□□□□ 0.28
LIMS2-207ENST00000409808 TRAPPC2LH3BP13 241 aa16.82■□□□□ 0.28
LIMS2-207ENST00000409808 LYZL6O75951 148 aa16.82■□□□□ 0.28
LIMS2-207ENST00000409808 IGHV1-2P23083 117 aa16.82■□□□□ 0.28
LIMS2-207ENST00000409808 HAAOP46952 286 aa16.82■□□□□ 0.28
LIMS2-207ENST00000409808 SEM1Q6ZVN7 128 aa16.82■□□□□ 0.28
LIMS2-207ENST00000409808 RPRMLQ8N4K4 120 aa16.82■□□□□ 0.28
LIMS2-207ENST00000409808 OR5A2Q8NGI9 324 aa16.82■□□□□ 0.28
LIMS2-207ENST00000409808 TRBV6-6A0A0A6YYG2 114 aa16.81■□□□□ 0.28
LIMS2-207ENST00000409808 SSSCA1O60232 199 aa16.81■□□□□ 0.28
LIMS2-207ENST00000409808 SCTP09683 121 aa16.81■□□□□ 0.28
LIMS2-207ENST00000409808 RAB2AP61019 212 aa16.81■□□□□ 0.28
LIMS2-207ENST00000409808 C20orf24Q9BUV8 137 aa16.81■□□□□ 0.28
LIMS2-207ENST00000409808 OR13C7P0DN81 318 aa16.81■□□□□ 0.28
LIMS2-207ENST00000409808 SLC25A6P12236 298 aa16.81■□□□□ 0.28
LIMS2-207ENST00000409808 IL24Q13007 206 aa16.81■□□□□ 0.28
LIMS2-207ENST00000409808 SP5Q6BEB4 398 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms