RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 DEGS1O15121 323 aa11.49□□□□□ -0.57
COL6A2-204ENST00000409416 GPR137BO60478 399 aa11.49□□□□□ -0.57
COL6A2-204ENST00000409416 S100A8P05109 93 aa11.49□□□□□ -0.57
COL6A2-204ENST00000409416 S100A2P29034 98 aa11.49□□□□□ -0.57
COL6A2-204ENST00000409416 NKX2-1P43699 371 aaPredicted RBP11.49□□□□□ -0.57
COL6A2-204ENST00000409416 TESK1Q15569 626 aa11.49□□□□□ -0.57
COL6A2-204ENST00000409416 SPANXN5Q5MJ07 72 aa11.49□□□□□ -0.57
COL6A2-204ENST00000409416 FAM27BQ5VT28 67 aa11.49□□□□□ -0.57
COL6A2-204ENST00000409416 CCDC71LQ8N9Z2 235 aa11.49□□□□□ -0.57
COL6A2-204ENST00000409416 TMEM54Q969K7 222 aa11.49□□□□□ -0.57
COL6A2-204ENST00000409416 ZNF71Q9NQZ8 489 aaPredicted RBP11.49□□□□□ -0.57
COL6A2-204ENST00000409416 CACFD1Q9UGQ2 172 aa11.49□□□□□ -0.57
COL6A2-204ENST00000409416 COLCA2A8K830 154 aa11.49□□□□□ -0.57
COL6A2-204ENST00000409416 CEACAM18A8MTB9 384 aa11.49□□□□□ -0.57
COL6A2-204ENST00000409416 SMIM6P0DI80 62 aa11.49□□□□□ -0.57
COL6A2-204ENST00000409416 ECI1P42126 302 aa11.49□□□□□ -0.57
COL6A2-204ENST00000409416 SSPNQ14714 243 aa11.49□□□□□ -0.57
COL6A2-204ENST00000409416 LHFPL2Q6ZUX7 228 aa11.49□□□□□ -0.57
COL6A2-204ENST00000409416 MDP1Q86V88 176 aa11.49□□□□□ -0.57
COL6A2-204ENST00000409416 ZDHHC23Q8IYP9 409 aa11.49□□□□□ -0.57
COL6A2-204ENST00000409416 HIST1H2BAQ96A08 127 aa11.49□□□□□ -0.57
COL6A2-204ENST00000409416 SEMA5BQ9P283 1151 aa11.49□□□□□ -0.57
COL6A2-204ENST00000409416 IGLV3-32A0A0A0MS00 114 aa11.48□□□□□ -0.57
COL6A2-204ENST00000409416 CD300LBA8K4G0 201 aa11.48□□□□□ -0.57
COL6A2-204ENST00000409416 M0R296 226 aa11.48□□□□□ -0.57
COL6A2-204ENST00000409416 TIMM8AO60220 97 aaPredicted RBP11.48□□□□□ -0.57
COL6A2-204ENST00000409416 PCBD1P61457 104 aa11.48□□□□□ -0.57
COL6A2-204ENST00000409416 H3F3AP84243 136 aa11.48□□□□□ -0.57
COL6A2-204ENST00000409416 HABP2Q14520 560 aaPredicted RBP11.48□□□□□ -0.57
COL6A2-204ENST00000409416 C10orf128Q5T292 105 aa11.48□□□□□ -0.57
COL6A2-204ENST00000409416 CPNE4Q96A23 557 aaPredicted RBP11.48□□□□□ -0.57
COL6A2-204ENST00000409416 PBDC1Q9BVG4 233 aa11.48□□□□□ -0.57
COL6A2-204ENST00000409416 ACACBO00763 2458 aa11.48□□□□□ -0.57
COL6A2-204ENST00000409416 CSPG4Q6UVK1 2322 aa11.48□□□□□ -0.57
COL6A2-204ENST00000409416 C3orf85A0A1B0GTC6 90 aa11.48□□□□□ -0.57
COL6A2-204ENST00000409416 CXorf65A6NEN9 183 aa11.48□□□□□ -0.57
COL6A2-204ENST00000409416 ZNF727A8MUV8 499 aa11.48□□□□□ -0.57
COL6A2-204ENST00000409416 PDCD6O75340 191 aa11.48□□□□□ -0.57
COL6A2-204ENST00000409416 PPYP01298 95 aa11.48□□□□□ -0.57
COL6A2-204ENST00000409416 FUT3P21217 361 aa11.48□□□□□ -0.57
COL6A2-204ENST00000409416 GPX4P36969 197 aaPredicted RBP11.48□□□□□ -0.57
COL6A2-204ENST00000409416 SNCAP37840 140 aa11.48□□□□□ -0.57
COL6A2-204ENST00000409416 IL15RAQ13261 267 aa11.48□□□□□ -0.57
COL6A2-204ENST00000409416 FAM201AQ5SY85 155 aa11.48□□□□□ -0.57
COL6A2-204ENST00000409416 SSC4DQ8WTU2 575 aa11.48□□□□□ -0.57
COL6A2-204ENST00000409416 DCTN5Q9BTE1 182 aa11.48□□□□□ -0.57
COL6A2-204ENST00000409416 A0A087WZY1 265 aa11.48□□□□□ -0.57
COL6A2-204ENST00000409416 TRGV5A0A0B4J1U4 118 aa11.48□□□□□ -0.57
COL6A2-204ENST00000409416 PQLC2LA1A4F0 135 aa11.48□□□□□ -0.57
COL6A2-204ENST00000409416 OR6C6A6NF89 314 aa11.48□□□□□ -0.57
COL6A2-204ENST00000409416 TCAPO15273 167 aa11.48□□□□□ -0.57
COL6A2-204ENST00000409416 RPP30P78346 268 aaKnown RBP11.48□□□□□ -0.57
COL6A2-204ENST00000409416 EWSR1Q01844 656 aaKnown RBP eCLIP11.48□□□□□ -0.57
COL6A2-204ENST00000409416 ZNF154Q13106 437 aa11.48□□□□□ -0.57
COL6A2-204ENST00000409416 ZNF766Q5HY98 468 aa11.48□□□□□ -0.57
COL6A2-204ENST00000409416 TBC1D26Q86UD7 250 aa11.48□□□□□ -0.57
COL6A2-204ENST00000409416 LEAP2Q969E1 77 aa11.48□□□□□ -0.57
COL6A2-204ENST00000409416 AURKAIP1Q9NWT8 199 aaPredicted RBP11.48□□□□□ -0.57
COL6A2-204ENST00000409416 OR1A1Q9P1Q5 309 aa11.48□□□□□ -0.57
COL6A2-204ENST00000409416 WASF3Q9UPY6 502 aa11.48□□□□□ -0.57
COL6A2-204ENST00000409416 IGHV3OR15-7A0A075B7D8 119 aa11.47□□□□□ -0.57
COL6A2-204ENST00000409416 SYNGR3O43761 229 aa11.47□□□□□ -0.57
COL6A2-204ENST00000409416 CD5P06127 495 aa11.47□□□□□ -0.57
COL6A2-204ENST00000409416 METTL15P1P0C7V9 234 aa11.47□□□□□ -0.57
COL6A2-204ENST00000409416 PRB4P10163 310 aaPredicted RBP11.47□□□□□ -0.57
COL6A2-204ENST00000409416 DEFA4P12838 97 aa11.47□□□□□ -0.57
COL6A2-204ENST00000409416 LYL1P12980 280 aa11.47□□□□□ -0.57
COL6A2-204ENST00000409416 IL2RGP31785 369 aa11.47□□□□□ -0.57
COL6A2-204ENST00000409416 TGFBR3Q03167 851 aa11.47□□□□□ -0.57
COL6A2-204ENST00000409416 OR2C3Q8N628 320 aa11.47□□□□□ -0.57
COL6A2-204ENST00000409416 OR5C1Q8NGR4 320 aa11.47□□□□□ -0.57
COL6A2-204ENST00000409416 M1APQ8TC57 530 aa11.47□□□□□ -0.57
COL6A2-204ENST00000409416 FAM173AQ9BQD7 235 aa11.47□□□□□ -0.57
COL6A2-204ENST00000409416 FOXI3A8MTJ6 420 aaPredicted RBP11.47□□□□□ -0.57
COL6A2-204ENST00000409416 ETV2O00321 342 aaPredicted RBP11.47□□□□□ -0.57
COL6A2-204ENST00000409416 MBP02144 154 aa11.47□□□□□ -0.57
COL6A2-204ENST00000409416 P2RY1P47900 373 aa11.47□□□□□ -0.57
COL6A2-204ENST00000409416 ZNF83P51522 516 aa11.47□□□□□ -0.57
COL6A2-204ENST00000409416 TRIP6Q15654 476 aaKnown RBP11.47□□□□□ -0.57
COL6A2-204ENST00000409416 C4orf17Q53FE4 359 aa11.47□□□□□ -0.57
COL6A2-204ENST00000409416 UBAC2Q8NBM4 344 aa11.47□□□□□ -0.57
COL6A2-204ENST00000409416 TUBD1Q9UJT1 453 aa11.47□□□□□ -0.57
COL6A2-204ENST00000409416 H0YL77 283 aa11.47□□□□□ -0.57
COL6A2-204ENST00000409416 H7C1Q1 480 aa11.47□□□□□ -0.57
COL6A2-204ENST00000409416 SULT1A1P50225 295 aa11.47□□□□□ -0.57
COL6A2-204ENST00000409416 CCL20P78556 96 aa11.47□□□□□ -0.57
COL6A2-204ENST00000409416 GGNQ86UU5 652 aa11.47□□□□□ -0.57
COL6A2-204ENST00000409416 TLN2Q9Y4G6 2542 aa11.46□□□□□ -0.57
COL6A2-204ENST00000409416 KIAA1324LA8MWY0 1029 aaPredicted RBP11.46□□□□□ -0.57
COL6A2-204ENST00000409416 MPPED1O15442 326 aa11.46□□□□□ -0.57
COL6A2-204ENST00000409416 GAPDHP04406 335 aaKnown RBP11.46□□□□□ -0.57
COL6A2-204ENST00000409416 BTF3P20290 206 aaKnown RBP11.46□□□□□ -0.57
COL6A2-204ENST00000409416 HNF1AP20823 631 aa11.46□□□□□ -0.57
COL6A2-204ENST00000409416 FKBP2P26885 142 aaKnown RBP11.46□□□□□ -0.57
COL6A2-204ENST00000409416 THNSL2Q86YJ6 484 aa11.46□□□□□ -0.57
COL6A2-204ENST00000409416 CMTM1Q8IZ96 169 aa11.46□□□□□ -0.57
COL6A2-204ENST00000409416 MRGPRDQ8TDS7 321 aa11.46□□□□□ -0.57
COL6A2-204ENST00000409416 WDR54Q9H977 334 aa11.46□□□□□ -0.57
COL6A2-204ENST00000409416 ANKHD1Q8IWZ3 2542 aaKnown RBP11.46□□□□□ -0.57
COL6A2-204ENST00000409416 NOTCH2Q04721 2471 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms