RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 KIRREL1Q96J84 757 aa11.57□□□□□ -0.56
CHRNA1-204ENST00000409323 TMUB1Q9BVT8 246 aa11.57□□□□□ -0.56
CHRNA1-204ENST00000409323 IFT46Q9NQC8 304 aa11.57□□□□□ -0.56
CHRNA1-204ENST00000409323 YAE1D1Q9NRH1 226 aa11.57□□□□□ -0.56
CHRNA1-204ENST00000409323 MBNL3Q9NUK0 354 aaKnown RBP11.57□□□□□ -0.56
CHRNA1-204ENST00000409323 UBE2J1Q9Y385 318 aaPredicted RBP11.57□□□□□ -0.56
CHRNA1-204ENST00000409323 KBTBD11-OT1A0A1B0GTJ5 212 aa11.56□□□□□ -0.56
CHRNA1-204ENST00000409323 LANCL1O43813 399 aa11.56□□□□□ -0.56
CHRNA1-204ENST00000409323 TOX4O94842 621 aa11.56□□□□□ -0.56
CHRNA1-204ENST00000409323 LY6G6DO95868 133 aa11.56□□□□□ -0.56
CHRNA1-204ENST00000409323 CGB3P0DN86 165 aa11.56□□□□□ -0.56
CHRNA1-204ENST00000409323 CGB7P0DN87 165 aa11.56□□□□□ -0.56
CHRNA1-204ENST00000409323 IL7P13232 177 aa11.56□□□□□ -0.56
CHRNA1-204ENST00000409323 COX7A1P24310 79 aa11.56□□□□□ -0.56
CHRNA1-204ENST00000409323 HLA-DRB3P79483 266 aa11.56□□□□□ -0.56
CHRNA1-204ENST00000409323 GNMTQ14749 295 aa11.56□□□□□ -0.56
CHRNA1-204ENST00000409323 IGSF11Q5DX21 431 aa11.56□□□□□ -0.56
CHRNA1-204ENST00000409323 ZNF880Q6PDB4 577 aa11.56□□□□□ -0.56
CHRNA1-204ENST00000409323 PNKDQ8N490 385 aa11.56□□□□□ -0.56
CHRNA1-204ENST00000409323 OR52L2PQ8NGH6 319 aa11.56□□□□□ -0.56
CHRNA1-204ENST00000409323 GPX8Q8TED1 209 aa11.56□□□□□ -0.56
CHRNA1-204ENST00000409323 CORO2AQ92828 525 aa11.56□□□□□ -0.56
CHRNA1-204ENST00000409323 SNAPC3Q92966 411 aa11.56□□□□□ -0.56
CHRNA1-204ENST00000409323 SUCNR1Q9BXA5 334 aa11.56□□□□□ -0.56
CHRNA1-204ENST00000409323 TMPRSS13Q9BYE2 586 aa11.56□□□□□ -0.56
CHRNA1-204ENST00000409323 SIRPDQ9H106 197 aa11.56□□□□□ -0.56
CHRNA1-204ENST00000409323 KCNIP1Q9NZI2 227 aa11.56□□□□□ -0.56
CHRNA1-204ENST00000409323 ZNRD1Q9P1U0 126 aa11.56□□□□□ -0.56
CHRNA1-204ENST00000409323 LPAR3Q9UBY5 353 aa11.56□□□□□ -0.56
CHRNA1-204ENST00000409323 A0A1W2PPE3 182 aa11.55□□□□□ -0.56
CHRNA1-204ENST00000409323 ZNF729A6NN14 1252 aaPredicted RBP11.55□□□□□ -0.56
CHRNA1-204ENST00000409323 GSTZ1O43708 216 aaPredicted RBP11.55□□□□□ -0.56
CHRNA1-204ENST00000409323 LPLP06858 475 aa11.55□□□□□ -0.56
CHRNA1-204ENST00000409323 HLA-DMAP28067 261 aa11.55□□□□□ -0.56
CHRNA1-204ENST00000409323 PITPNAQ00169 270 aa11.55□□□□□ -0.56
CHRNA1-204ENST00000409323 PAX8Q06710 450 aa11.55□□□□□ -0.56
CHRNA1-204ENST00000409323 HERPUD1Q15011 391 aa11.55□□□□□ -0.56
CHRNA1-204ENST00000409323 HMGN3Q15651 99 aa11.55□□□□□ -0.56
CHRNA1-204ENST00000409323 C6orf183Q5T699 404 aa11.55□□□□□ -0.56
CHRNA1-204ENST00000409323 C1orf229Q6ZS94 237 aaPredicted RBP11.55□□□□□ -0.56
CHRNA1-204ENST00000409323 TBX15Q96SF7 602 aa11.55□□□□□ -0.56
CHRNA1-204ENST00000409323 GAL3ST2Q9H3Q3 398 aa11.55□□□□□ -0.56
CHRNA1-204ENST00000409323 RIMS4Q9H426 269 aaPredicted RBP11.55□□□□□ -0.56
CHRNA1-204ENST00000409323 ABCB10Q9NRK6 738 aa11.55□□□□□ -0.56
CHRNA1-204ENST00000409323 OR1A1Q9P1Q5 309 aa11.55□□□□□ -0.56
CHRNA1-204ENST00000409323 AUP1Q9Y679 476 aa11.55□□□□□ -0.56
CHRNA1-204ENST00000409323 SVEP1Q4LDE5 3571 aa11.55□□□□□ -0.56
CHRNA1-204ENST00000409323 HIVEP1P15822 2718 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 TRBV6-6A0A0A6YYG2 114 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 IGKV1-6A0A0C4DH72 117 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 C17orf98A8MV24 154 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 TRDCB7Z8K6 153 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 SDCBPO00560 298 aaPredicted RBP11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 BET1O15155 118 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 CD5LO43866 347 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 IGHV1-8P0DP01 117 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 MMP9P14780 707 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 GZMHP20718 246 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 DTYMKP23919 212 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 GNG10P50151 68 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 CENPSQ8N2Z9 138 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 Q8N402 240 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 BEST4Q8NFU0 473 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 C15orf40Q8WUR7 153 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 FCAMRQ8WWV6 532 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 LHX4Q969G2 390 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 OCSTAMPQ9BR26 566 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 PARP12Q9H0J9 701 aaKnown RBP11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 ZNF286AQ9HBT8 521 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 TAS2R3Q9NYW6 316 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 IDI2-AS1Q9NZ38 188 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 SLC23A1Q9UHI7 598 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 OPN4Q9UHM6 478 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 TBC1D24Q9ULP9 559 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 F8P00451 2351 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 TRAV40A0A0B4J280 105 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 A0A1B0GVG6 124 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 A0A1W2PPH5 198 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 FABP7O15540 132 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 SPINT2O43291 252 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 PTTG1O95997 202 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 PMP2P02689 132 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 PPP1CCP36873 323 aaKnown RBP11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 ASAH1Q13510 395 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 CR1LQ2VPA4 569 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 MOB1BQ7L9L4 216 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 HOGA1Q86XE5 327 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 SMIM4Q8WVI0 70 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 NCOR1P1Q9H4R4 102 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 OR2S2Q9NQN1 319 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 KCNS2Q9ULS6 477 aa11.54□□□□□ -0.56
CHRNA1-204ENST00000409323 SONP18583 2426 aaKnown RBP11.53□□□□□ -0.56
CHRNA1-204ENST00000409323 NPIPB11E5RHQ5 1161 aa11.53□□□□□ -0.56
CHRNA1-204ENST00000409323 GABARAPH6UMI1 98 aa11.53□□□□□ -0.56
CHRNA1-204ENST00000409323 M0QYG6 137 aa11.53□□□□□ -0.56
CHRNA1-204ENST00000409323 M0R1W7 72 aa11.53□□□□□ -0.56
CHRNA1-204ENST00000409323 ORC5O43913 435 aa11.53□□□□□ -0.56
CHRNA1-204ENST00000409323 IGHV4-38-2P0DP08 117 aa11.53□□□□□ -0.56
CHRNA1-204ENST00000409323 HOXB4P17483 251 aaPredicted RBP11.53□□□□□ -0.56
CHRNA1-204ENST00000409323 RFX2P48378 723 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms