RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 CCRL2O00421 344 aa10.6□□□□□ -0.71
SDF4-203ENST00000403997 SPINT2O43291 252 aa10.6□□□□□ -0.71
SDF4-203ENST00000403997 GAPDHP04406 335 aaKnown RBP10.6□□□□□ -0.71
SDF4-203ENST00000403997 TMEM11P17152 192 aa10.6□□□□□ -0.71
SDF4-203ENST00000403997 REG1BP48304 166 aa10.6□□□□□ -0.71
SDF4-203ENST00000403997 GP2P55259 537 aaKnown RBP10.6□□□□□ -0.71
SDF4-203ENST00000403997 LOXL3P58215 753 aa10.6□□□□□ -0.71
SDF4-203ENST00000403997 GLT8D1Q68CQ7 371 aa10.6□□□□□ -0.71
SDF4-203ENST00000403997 FAM53AQ6NSI3 398 aaPredicted RBP10.6□□□□□ -0.71
SDF4-203ENST00000403997 CEACAM19Q7Z692 300 aa10.6□□□□□ -0.71
SDF4-203ENST00000403997 PRR18Q8N4B5 295 aa10.6□□□□□ -0.71
SDF4-203ENST00000403997 OR4F17Q8NGA8 305 aa10.6□□□□□ -0.71
SDF4-203ENST00000403997 FAM46BQ96A09 425 aa10.6□□□□□ -0.71
SDF4-203ENST00000403997 Q96M66 194 aa10.6□□□□□ -0.71
SDF4-203ENST00000403997 OR4F4Q96R69 305 aa10.6□□□□□ -0.71
SDF4-203ENST00000403997 CST11Q9H112 138 aa10.6□□□□□ -0.71
SDF4-203ENST00000403997 RAB9BQ9NP90 201 aa10.6□□□□□ -0.71
SDF4-203ENST00000403997 LSM2Q9Y333 95 aaKnown RBP10.6□□□□□ -0.71
SDF4-203ENST00000403997 MOB4Q9Y3A3 225 aa10.6□□□□□ -0.71
SDF4-203ENST00000403997 TCRBV4S1A1TA0A5B7 111 aa10.59□□□□□ -0.71
SDF4-203ENST00000403997 ADARB2-AS1A8MUL3 147 aa10.59□□□□□ -0.71
SDF4-203ENST00000403997 C12orf77C9JDV5 145 aa10.59□□□□□ -0.71
SDF4-203ENST00000403997 G3V4G9 280 aa10.59□□□□□ -0.71
SDF4-203ENST00000403997 HSD17B6O14756 317 aa10.59□□□□□ -0.71
SDF4-203ENST00000403997 CA11O75493 328 aa10.59□□□□□ -0.71
SDF4-203ENST00000403997 MPIG6BO95866 241 aa10.59□□□□□ -0.71
SDF4-203ENST00000403997 IGKV1D-33P01593 117 aa10.59□□□□□ -0.71
SDF4-203ENST00000403997 IGKV1-33P01594 117 aa10.59□□□□□ -0.71
SDF4-203ENST00000403997 HBZP02008 142 aa10.59□□□□□ -0.71
SDF4-203ENST00000403997 GLAP06280 429 aa10.59□□□□□ -0.71
SDF4-203ENST00000403997 UBBP0CG47 229 aa10.59□□□□□ -0.71
SDF4-203ENST00000403997 HSMCR30P0CW71 290 aa10.59□□□□□ -0.71
SDF4-203ENST00000403997 RCC1P18754 421 aaPredicted RBP10.59□□□□□ -0.71
SDF4-203ENST00000403997 SRMP19623 302 aa10.59□□□□□ -0.71
SDF4-203ENST00000403997 MYF6P23409 242 aa10.59□□□□□ -0.71
SDF4-203ENST00000403997 SLC35A2P78381 396 aa10.59□□□□□ -0.71
SDF4-203ENST00000403997 CD83Q01151 205 aa10.59□□□□□ -0.71
SDF4-203ENST00000403997 IRF3Q14653 427 aa10.59□□□□□ -0.71
SDF4-203ENST00000403997 HSD17B12Q53GQ0 312 aa10.59□□□□□ -0.71
SDF4-203ENST00000403997 RBM48Q5RL73 367 aaKnown RBP10.59□□□□□ -0.71
SDF4-203ENST00000403997 C6orf183Q5T699 404 aa10.59□□□□□ -0.71
SDF4-203ENST00000403997 LIPKQ5VXJ0 399 aa10.59□□□□□ -0.71
SDF4-203ENST00000403997 SIGIRRQ6IA17 410 aa10.59□□□□□ -0.71
SDF4-203ENST00000403997 LRRTM1Q86UE6 522 aa10.59□□□□□ -0.71
SDF4-203ENST00000403997 LINC00311Q8N616 119 aa10.59□□□□□ -0.71
SDF4-203ENST00000403997 PHYHIPQ92561 330 aa10.59□□□□□ -0.71
SDF4-203ENST00000403997 UFD1Q92890 307 aa10.59□□□□□ -0.71
SDF4-203ENST00000403997 TMEM203Q969S6 136 aa10.59□□□□□ -0.71
SDF4-203ENST00000403997 VCX3BQ9H321 246 aa10.59□□□□□ -0.71
SDF4-203ENST00000403997 GNG12Q9UBI6 72 aa10.59□□□□□ -0.71
SDF4-203ENST00000403997 NOTCH3Q9UM47 2321 aa10.59□□□□□ -0.71
SDF4-203ENST00000403997 IGHV3-72A0A0B4J1Y9 119 aa10.58□□□□□ -0.72
SDF4-203ENST00000403997 IGHV1-3A0A0C4DH29 117 aa10.58□□□□□ -0.72
SDF4-203ENST00000403997 PDCD6O75340 191 aa10.58□□□□□ -0.72
SDF4-203ENST00000403997 IL3RAP26951 378 aa10.58□□□□□ -0.72
SDF4-203ENST00000403997 ZNF816Q0VGE8 651 aaPredicted RBP10.58□□□□□ -0.72
SDF4-203ENST00000403997 NKAPLQ5M9Q1 402 aa10.58□□□□□ -0.72
SDF4-203ENST00000403997 C1orf100Q5SVJ3 147 aa10.58□□□□□ -0.72
SDF4-203ENST00000403997 OR10K2Q6IF99 312 aa10.58□□□□□ -0.72
SDF4-203ENST00000403997 TRAT1Q6PIZ9 186 aa10.58□□□□□ -0.72
SDF4-203ENST00000403997 C8orf31Q8N9H6 132 aa10.58□□□□□ -0.72
SDF4-203ENST00000403997 OR4X2Q8NGF9 303 aa10.58□□□□□ -0.72
SDF4-203ENST00000403997 OR10V1Q8NGI7 309 aa10.58□□□□□ -0.72
SDF4-203ENST00000403997 OR1L1Q8NH94 360 aa10.58□□□□□ -0.72
SDF4-203ENST00000403997 NEDD4LQ96PU5 975 aa10.58□□□□□ -0.72
SDF4-203ENST00000403997 CCDC90BQ9GZT6 254 aa10.58□□□□□ -0.72
SDF4-203ENST00000403997 DUSP21Q9H596 190 aa10.58□□□□□ -0.72
SDF4-203ENST00000403997 KCNIP1Q9NZI2 227 aa10.58□□□□□ -0.72
SDF4-203ENST00000403997 PLXNB1O43157 2135 aa10.57□□□□□ -0.72
SDF4-203ENST00000403997 ERICH4A6NGS2 130 aa10.57□□□□□ -0.72
SDF4-203ENST00000403997 SLC31A2O15432 143 aa10.57□□□□□ -0.72
SDF4-203ENST00000403997 RGS10O43665 173 aa10.57□□□□□ -0.72
SDF4-203ENST00000403997 SC5DO75845 299 aa10.57□□□□□ -0.72
SDF4-203ENST00000403997 UCHL1P09936 223 aa10.57□□□□□ -0.72
SDF4-203ENST00000403997 VSIG8P0DPA2 414 aa10.57□□□□□ -0.72
SDF4-203ENST00000403997 TMEM30BQ3MIR4 351 aa10.57□□□□□ -0.72
SDF4-203ENST00000403997 Q3ZCU0 254 aa10.57□□□□□ -0.72
SDF4-203ENST00000403997 TCTEX1D4Q5JR98 221 aa10.57□□□□□ -0.72
SDF4-203ENST00000403997 C10orf99Q6UWK7 81 aa10.57□□□□□ -0.72
SDF4-203ENST00000403997 GAPTQ8N292 157 aa10.57□□□□□ -0.72
SDF4-203ENST00000403997 C5orf56Q8N8D9 126 aa10.57□□□□□ -0.72
SDF4-203ENST00000403997 CYYR1Q96J86 154 aa10.57□□□□□ -0.72
SDF4-203ENST00000403997 ANKRD60Q9BZ19 345 aa10.57□□□□□ -0.72
SDF4-203ENST00000403997 TAF9BQ9HBM6 251 aa10.57□□□□□ -0.72
SDF4-203ENST00000403997 OR2S2Q9NQN1 319 aa10.57□□□□□ -0.72
SDF4-203ENST00000403997 NCBP2LA6PVI3 153 aaKnown RBP10.56□□□□□ -0.72
SDF4-203ENST00000403997 FGF16O43320 207 aa10.56□□□□□ -0.72
SDF4-203ENST00000403997 PF4V1P10720 104 aa10.56□□□□□ -0.72
SDF4-203ENST00000403997 CRHBPP24387 322 aa10.56□□□□□ -0.72
SDF4-203ENST00000403997 HTR2CP28335 458 aa10.56□□□□□ -0.72
SDF4-203ENST00000403997 ZNF134P52741 427 aa10.56□□□□□ -0.72
SDF4-203ENST00000403997 TPBGQ13641 420 aa10.56□□□□□ -0.72
SDF4-203ENST00000403997 EBI3Q14213 229 aa10.56□□□□□ -0.72
SDF4-203ENST00000403997 CT45A1Q5HYN5 189 aa10.56□□□□□ -0.72
SDF4-203ENST00000403997 KHDC1LQ5JSQ8 128 aa10.56□□□□□ -0.72
SDF4-203ENST00000403997 SLC25A48Q6ZT89 311 aaKnown RBP10.56□□□□□ -0.72
SDF4-203ENST00000403997 OR2T10Q8NGZ9 312 aa10.56□□□□□ -0.72
SDF4-203ENST00000403997 CT45A3Q8NHU0 189 aa10.56□□□□□ -0.72
SDF4-203ENST00000403997 KCNG3Q8TAE7 436 aa10.56□□□□□ -0.72
SDF4-203ENST00000403997 RTN4IP1Q8WWV3 396 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms