RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 FAM90A23PA8MXZ1 464 aa12.17□□□□□ -0.46
TPM1-207ENST00000403994 MCRIP1C9JLW8 97 aa12.17□□□□□ -0.46
TPM1-207ENST00000403994 CRTAPO75718 401 aaPredicted RBP12.17□□□□□ -0.46
TPM1-207ENST00000403994 PF4P02776 101 aa12.17□□□□□ -0.46
TPM1-207ENST00000403994 CD33P20138 364 aa12.17□□□□□ -0.46
TPM1-207ENST00000403994 HNF4GQ14541 408 aa12.17□□□□□ -0.46
TPM1-207ENST00000403994 GAPTQ8N292 157 aa12.17□□□□□ -0.46
TPM1-207ENST00000403994 NANOGP1Q8N7R0 232 aa12.17□□□□□ -0.46
TPM1-207ENST00000403994 ZNF439Q8NDP4 499 aa12.17□□□□□ -0.46
TPM1-207ENST00000403994 SELENOIQ9C0D9 397 aa12.17□□□□□ -0.46
TPM1-207ENST00000403994 VCXQ9H320 206 aa12.17□□□□□ -0.46
TPM1-207ENST00000403994 NECAP2Q9NVZ3 263 aa12.17□□□□□ -0.46
TPM1-207ENST00000403994 ETAA1Q9NY74 926 aa12.17□□□□□ -0.46
TPM1-207ENST00000403994 IGHV3-72A0A0B4J1Y9 119 aa12.16□□□□□ -0.46
TPM1-207ENST00000403994 SLC31A2O15432 143 aa12.16□□□□□ -0.46
TPM1-207ENST00000403994 SPINT2O43291 252 aa12.16□□□□□ -0.46
TPM1-207ENST00000403994 SC5DO75845 299 aa12.16□□□□□ -0.46
TPM1-207ENST00000403994 GAPDHP04406 335 aaKnown RBP12.16□□□□□ -0.46
TPM1-207ENST00000403994 IGLL1P15814 213 aa12.16□□□□□ -0.46
TPM1-207ENST00000403994 EBI3Q14213 229 aa12.16□□□□□ -0.46
TPM1-207ENST00000403994 INSL4Q14641 139 aa12.16□□□□□ -0.46
TPM1-207ENST00000403994 TMEM30BQ3MIR4 351 aa12.16□□□□□ -0.46
TPM1-207ENST00000403994 Q3ZCU0 254 aa12.16□□□□□ -0.46
TPM1-207ENST00000403994 C6orf183Q5T699 404 aa12.16□□□□□ -0.46
TPM1-207ENST00000403994 SYT6Q5T7P8 510 aaPredicted RBP12.16□□□□□ -0.46
TPM1-207ENST00000403994 SIGIRRQ6IA17 410 aa12.16□□□□□ -0.46
TPM1-207ENST00000403994 MOB3BQ86TA1 216 aa12.16□□□□□ -0.46
TPM1-207ENST00000403994 Q8N6K4 173 aa12.16□□□□□ -0.46
TPM1-207ENST00000403994 WFDC9Q8NEX5 89 aa12.16□□□□□ -0.46
TPM1-207ENST00000403994 OR4K15Q8NH41 348 aa12.16□□□□□ -0.46
TPM1-207ENST00000403994 RTN4IP1Q8WWV3 396 aaPredicted RBP12.16□□□□□ -0.46
TPM1-207ENST00000403994 SGCDQ92629 289 aa12.16□□□□□ -0.46
TPM1-207ENST00000403994 TFAP2CQ92754 450 aa12.16□□□□□ -0.46
TPM1-207ENST00000403994 ST6GALNAC6Q969X2 333 aa12.16□□□□□ -0.46
TPM1-207ENST00000403994 FAM46BQ96A09 425 aa12.16□□□□□ -0.46
TPM1-207ENST00000403994 NOL4LQ96MY1 436 aaPredicted RBP12.16□□□□□ -0.46
TPM1-207ENST00000403994 UQCC2Q9BRT2 126 aa12.16□□□□□ -0.46
TPM1-207ENST00000403994 MND1Q9BWT6 205 aa12.16□□□□□ -0.46
TPM1-207ENST00000403994 AURKAIP1Q9NWT8 199 aaPredicted RBP12.16□□□□□ -0.46
TPM1-207ENST00000403994 TRAPPC2LQ9UL33 140 aa12.16□□□□□ -0.46
TPM1-207ENST00000403994 ERGIC3Q9Y282 383 aa12.16□□□□□ -0.46
TPM1-207ENST00000403994 PEX16Q9Y5Y5 336 aa12.16□□□□□ -0.46
TPM1-207ENST00000403994 ANKRD65E5RJM6 399 aa12.15□□□□□ -0.46
TPM1-207ENST00000403994 HBZP02008 142 aa12.15□□□□□ -0.46
TPM1-207ENST00000403994 CDK1P06493 297 aa12.15□□□□□ -0.46
TPM1-207ENST00000403994 IL3RAP26951 378 aa12.15□□□□□ -0.46
TPM1-207ENST00000403994 VHLP40337 213 aa12.15□□□□□ -0.46
TPM1-207ENST00000403994 ZNF137PP52743 207 aa12.15□□□□□ -0.46
TPM1-207ENST00000403994 SLC35A2P78381 396 aa12.15□□□□□ -0.46
TPM1-207ENST00000403994 GPR50Q13585 617 aa12.15□□□□□ -0.46
TPM1-207ENST00000403994 FAM27D1Q5T7N8 215 aa12.15□□□□□ -0.46
TPM1-207ENST00000403994 SLC25A48Q6ZT89 311 aaKnown RBP12.15□□□□□ -0.46
TPM1-207ENST00000403994 ZNF329Q86UD4 541 aa12.15□□□□□ -0.46
TPM1-207ENST00000403994 PRR18Q8N4B5 295 aa12.15□□□□□ -0.46
TPM1-207ENST00000403994 OR10V1Q8NGI7 309 aa12.15□□□□□ -0.46
TPM1-207ENST00000403994 OR1L1Q8NH94 360 aa12.15□□□□□ -0.46
TPM1-207ENST00000403994 CHPT1Q8WUD6 406 aa12.15□□□□□ -0.46
TPM1-207ENST00000403994 EAF1Q96JC9 268 aaPredicted RBP12.15□□□□□ -0.46
TPM1-207ENST00000403994 RAB9BQ9NP90 201 aa12.15□□□□□ -0.46
TPM1-207ENST00000403994 GNG12Q9UBI6 72 aa12.15□□□□□ -0.46
TPM1-207ENST00000403994 LSM2Q9Y333 95 aaKnown RBP12.15□□□□□ -0.46
TPM1-207ENST00000403994 SERPINE3A8MV23 424 aa12.14□□□□□ -0.47
TPM1-207ENST00000403994 PDCD6O75340 191 aa12.14□□□□□ -0.47
TPM1-207ENST00000403994 CA11O75493 328 aa12.14□□□□□ -0.47
TPM1-207ENST00000403994 IGHG2P01859 326 aa12.14□□□□□ -0.47
TPM1-207ENST00000403994 RCC1P18754 421 aaPredicted RBP12.14□□□□□ -0.47
TPM1-207ENST00000403994 FUT3P21217 361 aa12.14□□□□□ -0.47
TPM1-207ENST00000403994 GP2P55259 537 aaKnown RBP12.14□□□□□ -0.47
TPM1-207ENST00000403994 GABPB1Q06547 395 aaPredicted RBP12.14□□□□□ -0.47
TPM1-207ENST00000403994 FOXB2Q5VYV0 432 aa12.14□□□□□ -0.47
TPM1-207ENST00000403994 RNLSQ5VYX0 342 aa12.14□□□□□ -0.47
TPM1-207ENST00000403994 TRAT1Q6PIZ9 186 aa12.14□□□□□ -0.47
TPM1-207ENST00000403994 ETV3LQ6ZN32 361 aa12.14□□□□□ -0.47
TPM1-207ENST00000403994 SLC35E3Q7Z769 313 aa12.14□□□□□ -0.47
TPM1-207ENST00000403994 TGIF2LXQ8IUE1 241 aa12.14□□□□□ -0.47
TPM1-207ENST00000403994 MRAPQ8TCY5 172 aa12.14□□□□□ -0.47
TPM1-207ENST00000403994 CST11Q9H112 138 aa12.14□□□□□ -0.47
TPM1-207ENST00000403994 LINC00527Q9UJ94 153 aa12.14□□□□□ -0.47
TPM1-207ENST00000403994 UBE2QL1A1L167 161 aa12.13□□□□□ -0.47
TPM1-207ENST00000403994 TXNL1O43396 289 aa12.13□□□□□ -0.47
TPM1-207ENST00000403994 GLAP06280 429 aa12.13□□□□□ -0.47
TPM1-207ENST00000403994 ZNF134P52741 427 aa12.13□□□□□ -0.47
TPM1-207ENST00000403994 RPL23AP62750 156 aaKnown RBP12.13□□□□□ -0.47
TPM1-207ENST00000403994 GNMTQ14749 295 aa12.13□□□□□ -0.47
TPM1-207ENST00000403994 RBM48Q5RL73 367 aaKnown RBP12.13□□□□□ -0.47
TPM1-207ENST00000403994 C6orf141Q5SZD1 244 aa12.13□□□□□ -0.47
TPM1-207ENST00000403994 LRRTM1Q86UE6 522 aa12.13□□□□□ -0.47
TPM1-207ENST00000403994 STPG2Q8N412 459 aa12.13□□□□□ -0.47
TPM1-207ENST00000403994 OR2T10Q8NGZ9 312 aa12.13□□□□□ -0.47
TPM1-207ENST00000403994 MRPL30Q8TCC3 161 aaKnown RBP12.13□□□□□ -0.47
TPM1-207ENST00000403994 RCC1LQ96I51 464 aaKnown RBP12.13□□□□□ -0.47
TPM1-207ENST00000403994 TMED9Q9BVK6 235 aa12.13□□□□□ -0.47
TPM1-207ENST00000403994 MBNL3Q9NUK0 354 aaKnown RBP12.13□□□□□ -0.47
TPM1-207ENST00000403994 LIN7CQ9NUP9 197 aaKnown RBP12.13□□□□□ -0.47
TPM1-207ENST00000403994 GHRLQ9UBU3 117 aa12.13□□□□□ -0.47
TPM1-207ENST00000403994 NKX1-2Q9UD57 310 aaPredicted RBP12.13□□□□□ -0.47
TPM1-207ENST00000403994 NCBP2LA6PVI3 153 aaKnown RBP12.12□□□□□ -0.47
TPM1-207ENST00000403994 ZNF736B4DX44 427 aaPredicted RBP12.12□□□□□ -0.47
TPM1-207ENST00000403994 MPIG6BO95866 241 aa12.12□□□□□ -0.47
TPM1-207ENST00000403994 MOSP00540 346 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms