RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 CEBPGP53567 150 aa16.94■□□□□ 0.3
CCDC47-202ENST00000403162 ZNF154Q13106 437 aa16.94■□□□□ 0.3
CCDC47-202ENST00000403162 RNPS1Q15287 305 aaKnown RBP16.94■□□□□ 0.3
CCDC47-202ENST00000403162 CMTM1Q8IZ96 169 aa16.94■□□□□ 0.3
CCDC47-202ENST00000403162 OR2V1Q8NHB1 315 aa16.94■□□□□ 0.3
CCDC47-202ENST00000403162 DOK5Q9P104 306 aa16.94■□□□□ 0.3
CCDC47-202ENST00000403162 TAAR3PQ9P1P4 343 aa16.94■□□□□ 0.3
CCDC47-202ENST00000403162 NCKAP5O14513 1909 aa16.94■□□□□ 0.3
CCDC47-202ENST00000403162 WRBO00258 174 aa16.94■□□□□ 0.3
CCDC47-202ENST00000403162 DFFBO76075 338 aa16.94■□□□□ 0.3
CCDC47-202ENST00000403162 ERVFRD-1P60508 538 aa16.94■□□□□ 0.3
CCDC47-202ENST00000403162 ZNF674Q2M3X9 581 aa16.94■□□□□ 0.3
CCDC47-202ENST00000403162 MPV17LQ2QL34 196 aa16.94■□□□□ 0.3
CCDC47-202ENST00000403162 NRN1LQ496H8 165 aa16.94■□□□□ 0.3
CCDC47-202ENST00000403162 ZNF343Q6P1L6 599 aa16.94■□□□□ 0.3
CCDC47-202ENST00000403162 C5orf24Q7Z6I8 188 aa16.94■□□□□ 0.3
CCDC47-202ENST00000403162 OR10D3Q8NH80 312 aa16.94■□□□□ 0.3
CCDC47-202ENST00000403162 SCNM1Q9BWG6 230 aa16.94■□□□□ 0.3
CCDC47-202ENST00000403162 CCL28Q9NRJ3 127 aa16.94■□□□□ 0.3
CCDC47-202ENST00000403162 ATP23Q9Y6H3 246 aa16.94■□□□□ 0.3
CCDC47-202ENST00000403162 B4DEV8 164 aa16.93■□□□□ 0.3
CCDC47-202ENST00000403162 RPL23AP62750 156 aaKnown RBP16.93■□□□□ 0.3
CCDC47-202ENST00000403162 CPEB3Q8NE35 698 aaKnown RBP16.93■□□□□ 0.3
CCDC47-202ENST00000403162 GPHA2Q96T91 129 aa16.93■□□□□ 0.3
CCDC47-202ENST00000403162 IGKV1-6A0A0C4DH72 117 aa16.92■□□□□ 0.3
CCDC47-202ENST00000403162 LOC102723971A0A1B0GUV8 181 aa16.92■□□□□ 0.3
CCDC47-202ENST00000403162 GATCO43716 136 aaKnown RBP16.92■□□□□ 0.3
CCDC47-202ENST00000403162 P04436 131 aa16.92■□□□□ 0.3
CCDC47-202ENST00000403162 NDUFA6P56556 154 aa16.92■□□□□ 0.3
CCDC47-202ENST00000403162 OR56B2PQ8NGI1 322 aa16.92■□□□□ 0.3
CCDC47-202ENST00000403162 OR13D1Q8NGV5 346 aa16.92■□□□□ 0.3
CCDC47-202ENST00000403162 REPIN1Q9BWE0 567 aaKnown RBP16.92■□□□□ 0.3
CCDC47-202ENST00000403162 BCL2L14Q9BZR8 327 aa16.92■□□□□ 0.3
CCDC47-202ENST00000403162 FGF23Q9GZV9 251 aaPredicted RBP16.92■□□□□ 0.3
CCDC47-202ENST00000403162 RYDENQ9NUL5 291 aaKnown RBP16.92■□□□□ 0.3
CCDC47-202ENST00000403162 DCHS1Q96JQ0 3298 aa16.92■□□□□ 0.3
CCDC47-202ENST00000403162 SLC25A6P12236 298 aa16.92■□□□□ 0.3
CCDC47-202ENST00000403162 Q0VFX4 171 aa16.92■□□□□ 0.3
CCDC47-202ENST00000403162 PRDX4Q13162 271 aa16.92■□□□□ 0.3
CCDC47-202ENST00000403162 SRSF6Q13247 344 aaKnown RBP16.92■□□□□ 0.3
CCDC47-202ENST00000403162 PYY3Q5JQD4 70 aa16.92■□□□□ 0.3
CCDC47-202ENST00000403162 STX12Q86Y82 276 aa16.92■□□□□ 0.3
CCDC47-202ENST00000403162 CALHM2Q9HA72 323 aa16.92■□□□□ 0.3
CCDC47-202ENST00000403162 GAR1Q9NY12 217 aaKnown RBP16.92■□□□□ 0.3
CCDC47-202ENST00000403162 PCSK5Q92824 1860 aa16.91■□□□□ 0.3
CCDC47-202ENST00000403162 PIGBOS1A0A0B4J2F0 54 aa16.91■□□□□ 0.3
CCDC47-202ENST00000403162 CYTIPO60759 359 aa16.91■□□□□ 0.3
CCDC47-202ENST00000403162 PGLYRP1O75594 196 aaPredicted RBP16.91■□□□□ 0.3
CCDC47-202ENST00000403162 S100A2P29034 98 aa16.91■□□□□ 0.3
CCDC47-202ENST00000403162 HAAOP46952 286 aa16.91■□□□□ 0.3
CCDC47-202ENST00000403162 GTF3AQ92664 365 aaKnown RBP16.91■□□□□ 0.3
CCDC47-202ENST00000403162 HS3ST6Q96QI5 342 aa16.91■□□□□ 0.3
CCDC47-202ENST00000403162 CNTRLQ7Z7A1 2325 aa16.91■□□□□ 0.3
CCDC47-202ENST00000403162 ZNF729A6NN14 1252 aaPredicted RBP16.91■□□□□ 0.3
CCDC47-202ENST00000403162 HIST1H2BKO60814 126 aa16.91■□□□□ 0.3
CCDC47-202ENST00000403162 HIST1H2BJP06899 126 aa16.91■□□□□ 0.3
CCDC47-202ENST00000403162 HIST1H2BOP23527 126 aa16.91■□□□□ 0.3
CCDC47-202ENST00000403162 HIST1H2BBP33778 126 aa16.91■□□□□ 0.3
CCDC47-202ENST00000403162 HIST1H2BDP58876 126 aa16.91■□□□□ 0.3
CCDC47-202ENST00000403162 HIST1H2BCP62807 126 aa16.91■□□□□ 0.3
CCDC47-202ENST00000403162 HLA-DRB3P79483 266 aa16.91■□□□□ 0.3
CCDC47-202ENST00000403162 HIST2H2BEQ16778 126 aa16.91■□□□□ 0.3
CCDC47-202ENST00000403162 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.91■□□□□ 0.3
CCDC47-202ENST00000403162 H1FOOQ8IZA3 346 aaPredicted RBP16.91■□□□□ 0.3
CCDC47-202ENST00000403162 HIST1H2BHQ93079 126 aa16.91■□□□□ 0.3
CCDC47-202ENST00000403162 TMEM45BQ96B21 275 aa16.91■□□□□ 0.3
CCDC47-202ENST00000403162 HIST1H2BNQ99877 126 aa16.91■□□□□ 0.3
CCDC47-202ENST00000403162 HIST1H2BMQ99879 126 aa16.91■□□□□ 0.3
CCDC47-202ENST00000403162 TNRC6AQ8NDV7 1962 aaKnown RBP16.9■□□□□ 0.3
CCDC47-202ENST00000403162 TGIF2-C20orf24A0A0A6YYL0 155 aa16.9■□□□□ 0.3
CCDC47-202ENST00000403162 A0A1B0GU03 582 aa16.9■□□□□ 0.3
CCDC47-202ENST00000403162 LRRC3CA6NJW4 275 aa16.9■□□□□ 0.3
CCDC47-202ENST00000403162 RFPL3SP0C7P2 107 aa16.9■□□□□ 0.3
CCDC47-202ENST00000403162 F2RP25116 425 aa16.9■□□□□ 0.3
CCDC47-202ENST00000403162 CLN3Q13286 438 aa16.9■□□□□ 0.3
CCDC47-202ENST00000403162 CEACAM21Q3KPI0 293 aa16.9■□□□□ 0.3
CCDC47-202ENST00000403162 OR2B11Q5JQS5 317 aa16.9■□□□□ 0.3
CCDC47-202ENST00000403162 ATP1A1-AS1Q5TC04 95 aa16.9■□□□□ 0.3
CCDC47-202ENST00000403162 RIMS4Q9H426 269 aaPredicted RBP16.9■□□□□ 0.3
CCDC47-202ENST00000403162 TREM2Q9NZC2 230 aa16.9■□□□□ 0.3
CCDC47-202ENST00000403162 URGCP-MRPS24S4R325 110 aa16.9■□□□□ 0.3
CCDC47-202ENST00000403162 SPTBN2O15020 2390 aa16.9■□□□□ 0.3
CCDC47-202ENST00000403162 TRBV23-1A0A0A0MS06 115 aa16.89■□□□□ 0.3
CCDC47-202ENST00000403162 SEC14L6B5MCN3 397 aa16.89■□□□□ 0.3
CCDC47-202ENST00000403162 NXPH3O95157 252 aa16.89■□□□□ 0.3
CCDC47-202ENST00000403162 IFNA5P01569 189 aa16.89■□□□□ 0.3
CCDC47-202ENST00000403162 S100GP29377 79 aa16.89■□□□□ 0.3
CCDC47-202ENST00000403162 GPM6AP51674 278 aa16.89■□□□□ 0.3
CCDC47-202ENST00000403162 PCSK4Q6UW60 755 aa16.89■□□□□ 0.3
CCDC47-202ENST00000403162 ZDHHC23Q8IYP9 409 aa16.89■□□□□ 0.3
CCDC47-202ENST00000403162 ZNF295-AS1Q8N0V1 137 aa16.89■□□□□ 0.3
CCDC47-202ENST00000403162 RAB40CQ96S21 281 aa16.89■□□□□ 0.3
CCDC47-202ENST00000403162 MTCH1Q9NZJ7 389 aa16.89■□□□□ 0.3
CCDC47-202ENST00000403162 WASF3Q9UPY6 502 aa16.89■□□□□ 0.3
CCDC47-202ENST00000403162 TRBV6-6A0A0A6YYG2 114 aa16.89■□□□□ 0.29
CCDC47-202ENST00000403162 KIAA1324LA8MWY0 1029 aaPredicted RBP16.89■□□□□ 0.29
CCDC47-202ENST00000403162 F10P00742 488 aa16.89■□□□□ 0.29
CCDC47-202ENST00000403162 SERPINA7P05543 415 aa16.89■□□□□ 0.29
CCDC47-202ENST00000403162 WNT2P09544 360 aa16.89■□□□□ 0.29
CCDC47-202ENST00000403162 WIPI1Q5MNZ9 446 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms